RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 C11orf94C9JXX5 98 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 TNFSF12O43508 249 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 PPYP01298 95 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 CTSDP07339 412 aaPredicted RBP6.72□□□□□ -1.33
CPSF4-211ENST00000471455 TRAPPC2P0DI81 140 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 TRAPPC2BP0DI82 140 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 OR13C7P0DN81 318 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 RPA2P15927 270 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 HOXA5P20719 270 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 FCGR2CP31995 323 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 PAFAH1B2P68402 229 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 Q56UQ5 140 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 AADACL3Q5VUY0 350 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 SLC25A24Q6NUK1 477 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 BEST4Q8NFU0 473 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 OR1L8Q8NGR8 309 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 SLC5A7Q9GZV3 580 aa6.72□□□□□ -1.33
CPSF4-211ENST00000471455 ELF5Q9UKW6 265 aaPredicted RBP6.72□□□□□ -1.33
CPSF4-211ENST00000471455 KMT2AQ03164 3969 aa6.71□□□□□ -1.33
CPSF4-211ENST00000471455 SULT1C2O00338 296 aa6.71□□□□□ -1.34
CPSF4-211ENST00000471455 NUPL2O15504 423 aaKnown RBP6.71□□□□□ -1.34
CPSF4-211ENST00000471455 EIF4EP06730 217 aaKnown RBP6.71□□□□□ -1.34
CPSF4-211ENST00000471455 SERPINE2P07093 398 aa6.71□□□□□ -1.34
CPSF4-211ENST00000471455 FCGR2BP31994 310 aaPredicted RBP6.71□□□□□ -1.34
CPSF4-211ENST00000471455 BRWD1-AS2P59051 145 aa6.71□□□□□ -1.34
CPSF4-211ENST00000471455 HERV-K104P61576 105 aa6.71□□□□□ -1.34
CPSF4-211ENST00000471455 C22orf42Q6IC83 251 aa6.71□□□□□ -1.34
CPSF4-211ENST00000471455 LINC00336Q6ZUF6 198 aa6.71□□□□□ -1.34
CPSF4-211ENST00000471455 TPRA1Q86W33 373 aa6.71□□□□□ -1.34
CPSF4-211ENST00000471455 NR2C2APQ86WQ0 139 aa6.71□□□□□ -1.34
CPSF4-211ENST00000471455 UBAC2Q8NBM4 344 aa6.71□□□□□ -1.34
CPSF4-211ENST00000471455 TMEM116Q8NCL8 245 aa6.71□□□□□ -1.34
CPSF4-211ENST00000471455 TSPAN14Q8NG11 270 aa6.71□□□□□ -1.34
CPSF4-211ENST00000471455 OR11H2Q8NH07 326 aa6.71□□□□□ -1.34
CPSF4-211ENST00000471455 TMEM56Q96MV1 263 aa6.71□□□□□ -1.34
CPSF4-211ENST00000471455 CCL28Q9NRJ3 127 aa6.71□□□□□ -1.34
CPSF4-211ENST00000471455 F11RQ9Y624 299 aaKnown RBP6.71□□□□□ -1.34
CPSF4-211ENST00000471455 A0A0A6YYH2 397 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 IGHV7-4-1A0A0J9YVY3 117 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 A6NJ64 397 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 MARCH11A6NNE9 402 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 SNAPC5O75971 98 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 YIF1AO95070 293 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 CA1P00915 261 aaPredicted RBP6.7□□□□□ -1.34
CPSF4-211ENST00000471455 CBX5P45973 191 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 AQP4P55087 323 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 SCAND1P57086 179 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 FXYD4P59646 89 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 NANOS2P60321 138 aaKnown RBP6.7□□□□□ -1.34
CPSF4-211ENST00000471455 WT1-ASQ06250 92 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 TMEM187Q14656 261 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 TMEM41BQ5BJD5 291 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 ZNF773Q6PK81 442 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 HOGA1Q86XE5 327 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 APRG1Q8IVJ8 170 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 OR51H1Q8NH63 302 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 SCARB1Q8WTV0 552 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 GPHA2Q96T91 129 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 GINS3Q9BRX5 216 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 RHPN1-AS1Q9BWJ2 59 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 HINT2Q9BX68 163 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 CDIP1Q9H305 208 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 VCX3BQ9H321 246 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 RHBDL2Q9NX52 303 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 FKBP11Q9NYL4 201 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 SMPXQ9UHP9 88 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 DAPK2Q9UIK4 370 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 PRNDQ9UKY0 176 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 ETV7Q9Y603 341 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 X6R8D5 127 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 DNAH10Q8IVF4 4471 aa6.7□□□□□ -1.34
CPSF4-211ENST00000471455 TRAV3A0A0B4J244 114 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 CHEK1O14757 476 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 ZNF207O43670 478 aaKnown RBP6.69□□□□□ -1.34
CPSF4-211ENST00000471455 SSX5O60225 188 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 DFFBO76075 338 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 S1PR2O95136 353 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 S100GP29377 79 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 TFPI2P48307 235 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 HSPA13P48723 471 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 TMEM17Q86X19 198 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 CMTM1Q8IZ96 169 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 CADM3Q8N126 398 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 OR10W1Q8NGF6 305 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 OR1P1Q8NH06 330 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 LGALS14Q8TCE9 139 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 RNF2Q99496 336 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 TSC22D3Q99576 134 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 TXN2Q99757 166 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 CHRDL1Q9BU40 450 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 HRH4Q9H3N8 390 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 TMEM231Q9H6L2 316 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 NDUFA4L2Q9NRX3 87 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 HECTD4Q9Y4D8 3996 aa6.69□□□□□ -1.34
CPSF4-211ENST00000471455 TRAV18A0A075B6X5 111 aa6.68□□□□□ -1.34
CPSF4-211ENST00000471455 IGHV3OR16-8A0A075B7F1 116 aa6.68□□□□□ -1.34
CPSF4-211ENST00000471455 TRAV14DV4A0A0A6YYC5 116 aa6.68□□□□□ -1.34
CPSF4-211ENST00000471455 TRAV2A0A0B4J234 112 aa6.68□□□□□ -1.34
CPSF4-211ENST00000471455 TEX50A0A1B0GTY4 177 aa6.68□□□□□ -1.34
CPSF4-211ENST00000471455 SMIM30A4D0T7 59 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms