RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 SMIM8Q96KF7 97 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 GSKIPQ9P0R6 139 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 KIAA1456Q9P272 454 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 BOLA1Q9Y3E2 137 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 WSB1Q9Y6I7 421 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 ATRQ13535 2644 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 TENM1Q9UKZ4 2725 aa7.7□□□□□ -1.18
SF3A1-207ENST00000471342 FAM25EA8MYX2 175 aa7.69□□□□□ -1.18
SF3A1-207ENST00000471342 I3L2K1 104 aa7.69□□□□□ -1.18
SF3A1-207ENST00000471342 ATG12O94817 140 aa7.69□□□□□ -1.18
SF3A1-207ENST00000471342 IFNA21P01568 189 aa7.69□□□□□ -1.18
SF3A1-207ENST00000471342 IAPPP10997 89 aa7.69□□□□□ -1.18
SF3A1-207ENST00000471342 RAP2BP61225 183 aa7.69□□□□□ -1.18
SF3A1-207ENST00000471342 GNB1P62873 340 aa7.69□□□□□ -1.18
SF3A1-207ENST00000471342 PRSS54Q6PEW0 395 aa7.69□□□□□ -1.18
SF3A1-207ENST00000471342 LCNL1Q6ZST4 164 aa7.69□□□□□ -1.18
SF3A1-207ENST00000471342 SLC35E3Q7Z769 313 aa7.69□□□□□ -1.18
SF3A1-207ENST00000471342 GRPEL2Q8TAA5 225 aa7.69□□□□□ -1.18
SF3A1-207ENST00000471342 FAM110DQ8TAY7 271 aaPredicted RBP7.69□□□□□ -1.18
SF3A1-207ENST00000471342 WFDC1Q9HC57 220 aa7.69□□□□□ -1.18
SF3A1-207ENST00000471342 FKBP11Q9NYL4 201 aa7.69□□□□□ -1.18
SF3A1-207ENST00000471342 F11RQ9Y624 299 aaKnown RBP7.69□□□□□ -1.18
SF3A1-207ENST00000471342 TRAV41A0A0B4J266 112 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 TMEM89A2RUT3 159 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 FAM24AA6NFZ4 105 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 TRIM77I1YAP6 450 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 SNAPC5O75971 98 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 NDUFB8O95169 186 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 OR13C7P0DN81 318 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 CXCL2P19875 107 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 TAS2R30P59541 319 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 DEFA5Q01523 94 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 C2orf83Q53S99 150 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 TMEM65Q6PI78 240 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 ZNF329Q86UD4 541 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 TMEM252Q8N6L7 170 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 OR5T1Q8NG75 326 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 DTD1Q8TEA8 209 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 SPIN2AQ99865 258 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 SPIN2BQ9BPZ2 258 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 PRSS22Q9GZN4 317 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 COMMD5Q9GZQ3 224 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 NPFFR1Q9GZQ6 430 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 PARP11Q9NR21 331 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 TNFSF18Q9UNG2 199 aa7.68□□□□□ -1.18
SF3A1-207ENST00000471342 IGKV1D-37A0A075B6S9 117 aa7.67□□□□□ -1.18
SF3A1-207ENST00000471342 IGKV1OR2-108A0A075B7D4 117 aa7.67□□□□□ -1.18
SF3A1-207ENST00000471342 AP4M1O00189 453 aa7.67□□□□□ -1.18
SF3A1-207ENST00000471342 WRBO00258 174 aa7.67□□□□□ -1.18
SF3A1-207ENST00000471342 SSSCA1O60232 199 aa7.67□□□□□ -1.18
SF3A1-207ENST00000471342 C18orf65Q6ZTR6 163 aa7.67□□□□□ -1.18
SF3A1-207ENST00000471342 OR2T35Q8NGX2 323 aa7.67□□□□□ -1.18
SF3A1-207ENST00000471342 OR1P1Q8NH06 330 aa7.67□□□□□ -1.18
SF3A1-207ENST00000471342 ASB13Q8WXK3 278 aa7.67□□□□□ -1.18
SF3A1-207ENST00000471342 CYTL1Q9NRR1 136 aa7.67□□□□□ -1.18
SF3A1-207ENST00000471342 LYRM2Q9NU23 88 aaPredicted RBP7.67□□□□□ -1.18
SF3A1-207ENST00000471342 MBD2Q9UBB5 411 aa7.67□□□□□ -1.18
SF3A1-207ENST00000471342 LSM5Q9Y4Y9 91 aaKnown RBP7.67□□□□□ -1.18
SF3A1-207ENST00000471342 PIGBOS1A0A0B4J2F0 54 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 BTBD17A6NE02 478 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 H3BP45 60 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 TSC22D2O75157 780 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 IFNA17P01571 189 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 P2RY1P47900 373 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 CYCSP99999 105 aaKnown RBP7.66□□□□□ -1.18
SF3A1-207ENST00000471342 NHLH2Q02577 135 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 SCGB2A2Q13296 93 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 VWC2Q2TAL6 325 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 LGALSLQ3ZCW2 172 aaPredicted RBP7.66□□□□□ -1.18
SF3A1-207ENST00000471342 LRRC37A5PQ49AS3 106 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 ARSJQ5FYB0 599 aaPredicted RBP7.66□□□□□ -1.18
SF3A1-207ENST00000471342 THOC7Q6I9Y2 204 aaKnown RBP7.66□□□□□ -1.18
SF3A1-207ENST00000471342 UNQ5815/PRO19632Q6UWF5 114 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 RBMS3Q6XE24 437 aaKnown RBP7.66□□□□□ -1.18
SF3A1-207ENST00000471342 TMEM68Q96MH6 324 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 AQP10Q96PS8 301 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 RAB40CQ96S21 281 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 PLA2G2EQ9NZK7 142 aa7.66□□□□□ -1.18
SF3A1-207ENST00000471342 A0A1W2PN81 502 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 CLPSL1A2RUU4 121 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 MFSD2BA6NFX1 497 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 CNIH1O95406 144 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 TRBV12-3P01733 135 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 C1QBP02746 253 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 CD28P10747 220 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 CHRNA7P36544 502 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 PLGLAQ15195 96 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 ECSCRQ19T08 205 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 C9orf152Q5JTZ5 239 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 ETV3LQ6ZN32 361 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 ZNF491Q8N8L2 437 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 SLC24A4Q8NFF2 622 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 RNASE11Q8TAA1 199 aaKnown RBP7.65□□□□□ -1.18
SF3A1-207ENST00000471342 CCDC140Q96MF4 163 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 JMJD8Q96S16 334 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 PLEKHA3Q9HB20 300 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 U3KQ87 197 aa7.65□□□□□ -1.18
SF3A1-207ENST00000471342 HMSDA8MTL9 139 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 CEBPZOSA8MTT3 80 aa7.64□□□□□ -1.19
SF3A1-207ENST00000471342 I3L521 148 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms