RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 OR8U9P0C7N5 309 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 BLOC1S1P78537 153 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 CD69Q07108 199 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 IGSF11Q5DX21 431 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 FAM74A1Q5RGS3 127 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 FAM122CQ6P4D5 195 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 DHRS11Q6UWP2 260 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 PPP1R27Q86WC6 154 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 ABHD5Q8WTS1 349 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 SMIM8Q96KF7 97 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 TMEM68Q96MH6 324 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 ZNF2Q9BSG1 426 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-211ENST00000471260 ST6GALNAC5Q9BVH7 336 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 SLC5A7Q9GZV3 580 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 OR2D2Q9H210 308 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 SLC35D1Q9NTN3 355 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 KCNIP3Q9Y2W7 256 aa10.47□□□□□ -0.73
HMGN1-211ENST00000471260 TMEM218A2RU14 115 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 H0YIZ8 118 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 H3BUA1 57 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 SOX15O60248 233 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 DEDDO75618 318 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 JTBO76095 146 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 ATG12O94817 140 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 CA2P00918 260 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 CTRB1P17538 263 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 GNB1P62873 340 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 BTN1A1Q13410 526 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 ASPHD1Q5U4P2 390 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 CTRB2Q6GPI1 263 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 UNQ5815/PRO19632Q6UWF5 114 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 ZNF429Q86V71 674 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 CLRN3Q8NCR9 226 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 ADTRPQ96IZ2 230 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 NKX6-2Q9C056 277 aaPredicted RBP10.46□□□□□ -0.73
HMGN1-211ENST00000471260 NAA60Q9H7X0 242 aa10.46□□□□□ -0.73
HMGN1-211ENST00000471260 DUXBA0A1W2PPF3 345 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 E5RGE8 158 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 LINC01619G3V211 115 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 ADAP1O75689 374 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 APOC3P02656 99 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 LGALS1P09382 135 aaKnown RBP10.45□□□□□ -0.74
HMGN1-211ENST00000471260 CTXN2P0C2S0 81 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 PJVKQ0ZLH3 352 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 RAB32Q13637 225 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 FXYD3Q14802 87 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 RTL8BQ17RB0 113 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 IAH1Q2TAA2 248 aaPredicted RBP10.45□□□□□ -0.74
HMGN1-211ENST00000471260 TMEM177Q53S58 311 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 LFNGQ8NES3 379 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 BPIFCQ8NFQ6 507 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 OR1S2Q8NGQ3 325 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 ARPC1AQ92747 370 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 MOB3AQ96BX8 217 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 RRNAD1Q96FB5 475 aaKnown RBP10.45□□□□□ -0.74
HMGN1-211ENST00000471260 AIFM2Q9BRQ8 373 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 SEC11CQ9BY50 192 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 NSG2Q9Y328 171 aa10.45□□□□□ -0.74
HMGN1-211ENST00000471260 LSM4Q9Y4Z0 139 aaKnown RBP10.45□□□□□ -0.74
HMGN1-211ENST00000471260 RBM7Q9Y580 266 aaKnown RBP10.45□□□□□ -0.74
HMGN1-211ENST00000471260 OVOL1O14753 267 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 SLC25A17O43808 307 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 BRI3O95415 125 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 HSPB1P04792 205 aaKnown RBP10.44□□□□□ -0.74
HMGN1-211ENST00000471260 H2AFB1P0C5Y9 115 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 NHLRC4P0CG21 123 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-211ENST00000471260 ATF4P18848 351 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-211ENST00000471260 SULT1A2P50226 295 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 LINC00205P59089 165 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 RND3P61587 244 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 TMEM268Q5VZI3 342 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 H1FOOQ8IZA3 346 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-211ENST00000471260 LGI3Q8N145 548 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-211ENST00000471260 UBAC2Q8NBM4 344 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 OR10C1Q96KK4 312 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 RHOVQ96L33 236 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 HARBI1Q96MB7 349 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 OR5B12Q96R08 314 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 CLCC1Q96S66 551 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 FAM103A1Q9BTL3 118 aaKnown RBP10.44□□□□□ -0.74
HMGN1-211ENST00000471260 TPSG1Q9NRR2 321 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 OR5AC2Q9NZP5 309 aa10.44□□□□□ -0.74
HMGN1-211ENST00000471260 ZNF256Q9Y2P7 627 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-211ENST00000471260 BORCS7-ASMTA0A0B4J1R7 106 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 K7EPK0 472 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 DNASE2O00115 360 aaPredicted RBP10.43□□□□□ -0.74
HMGN1-211ENST00000471260 TSPAN4O14817 238 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 SNAPINO95295 136 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 CNIH1O95406 144 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 IGLV2-23P01705 113 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 CRYGBP07316 175 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 RPL12P30050 165 aaKnown RBP10.43□□□□□ -0.74
HMGN1-211ENST00000471260 RAB5CP51148 216 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 TPPP2P59282 170 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 S100A10P60903 97 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 HERV-K104P61576 105 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 FLI1Q01543 452 aaPredicted RBP10.43□□□□□ -0.74
HMGN1-211ENST00000471260 PXDC1Q5TGL8 231 aa10.43□□□□□ -0.74
HMGN1-211ENST00000471260 MAFIPQ8WZ33 124 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms