RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 SH2D7A6NKC9 451 aaPredicted RBP6.6□□□□□ -1.35
GTF3A-206ENST00000470606 LINC01548A6NM66 108 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 INS-IGF2F8WCM5 200 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 AMY1AP04745 511 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 OR13C7P0DN81 318 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 NPY1RP25929 384 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 ARSJQ5FYB0 599 aaPredicted RBP6.6□□□□□ -1.35
GTF3A-206ENST00000470606 CLLU1Q5K131 121 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 ASPHD1Q5U4P2 390 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 ETV3LQ6ZN32 361 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 TMEM219Q86XT9 240 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 SRSF12Q8WXF0 261 aaKnown RBP6.6□□□□□ -1.35
GTF3A-206ENST00000470606 P2RX4Q99571 388 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 HSPB9Q9BQS6 159 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 UBE2L5PA0A1B0GUS4 154 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 NCBP2LA6PVI3 153 aaKnown RBP6.6□□□□□ -1.35
GTF3A-206ENST00000470606 SMAD7O15105 426 aaKnown RBP6.6□□□□□ -1.35
GTF3A-206ENST00000470606 FGF16O43320 207 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 ATP6V1G1O75348 118 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 EGR2P11161 476 aaPredicted RBP6.6□□□□□ -1.35
GTF3A-206ENST00000470606 TMEM11P17152 192 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 RPL27AP46776 148 aaKnown RBP6.6□□□□□ -1.35
GTF3A-206ENST00000470606 CX3CL1P78423 397 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 LRRC75BQ2VPJ9 315 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 OR10P1Q8NGE3 313 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 FOXC2Q99958 501 aa6.6□□□□□ -1.35
GTF3A-206ENST00000470606 WDR61Q9GZS3 305 aaKnown RBP6.6□□□□□ -1.35
GTF3A-206ENST00000470606 FNDC4Q9H6D8 234 aaPredicted RBP6.6□□□□□ -1.35
GTF3A-206ENST00000470606 MRPL36Q9P0J6 103 aaKnown RBP6.6□□□□□ -1.35
GTF3A-206ENST00000470606 IGKV1OR2-108A0A075B7D4 117 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 BORCS7-ASMTA0A0B4J1R7 106 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 IGHV7-81A0A0B4J1V7 117 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 IGHV3-48P01763 117 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 OR8U8P0C7N1 319 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 FAM106CPP0CH98 169 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 HBG1P69891 147 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 HBG2P69892 147 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 ZNF266Q14584 549 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 C2orf83Q53S99 150 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 PVRIGQ6DKI7 326 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 LILRB2Q8N423 598 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 SSX3Q99909 188 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 VSIRQ9H7M9 311 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 CACFD1Q9UGQ2 172 aa6.59□□□□□ -1.35
GTF3A-206ENST00000470606 LINC00862A6NCI5 91 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 J3QLI3 93 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 DFFBO76075 338 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 IFNA4P05014 189 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 SEC11BP0C7V7 166 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 BRS3P32247 399 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 MAS1LP35410 378 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 SULT1A2P50226 295 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 FXYD3Q14802 87 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 PLGLAQ15195 96 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 DEFB112Q30KQ8 113 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 TREML4Q6UXN2 200 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 SSMEM1Q8WWF3 244 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 PINX1Q96BK5 328 aaKnown RBP6.58□□□□□ -1.36
GTF3A-206ENST00000470606 TMEM147Q9BVK8 224 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 ENY2Q9NPA8 101 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 H3BUX3 64 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 ACTL6BO94805 426 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 ZNF562Q6V9R5 426 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 TMEM182Q6ZP80 229 aaPredicted RBP6.58□□□□□ -1.36
GTF3A-206ENST00000470606 Q6ZS46 218 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 C5orf56Q8N8D9 126 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 OR2G3Q8NGZ4 309 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 TAF15Q92804 592 aaKnown RBP eCLIP6.58□□□□□ -1.36
GTF3A-206ENST00000470606 ZNF48Q96MX3 618 aaPredicted RBP6.58□□□□□ -1.36
GTF3A-206ENST00000470606 PARD6GQ9BYG4 376 aaPredicted RBP6.58□□□□□ -1.36
GTF3A-206ENST00000470606 UQCC1Q9NVA1 299 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 KIAA1456Q9P272 454 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 WDR83OSQ9Y284 106 aa6.58□□□□□ -1.36
GTF3A-206ENST00000470606 LSM4Q9Y4Z0 139 aaKnown RBP6.58□□□□□ -1.36
GTF3A-206ENST00000470606 HIVEP2P31629 2446 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 A0A1W2PN81 502 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 EIF3GO75821 320 aaKnown RBP eCLIP6.57□□□□□ -1.36
GTF3A-206ENST00000470606 CNIH1O95406 144 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 LY86O95711 162 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 PRH1P02810 166 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 DEFA4P12838 97 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 CHRNA7P36544 502 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 SNCAP37840 140 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 DLK1P80370 383 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 ERHP84090 104 aaKnown RBP6.57□□□□□ -1.36
GTF3A-206ENST00000470606 GAMTQ14353 236 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 LY6EQ16553 131 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 CYB5R2Q6BCY4 276 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 ACSM6Q6P461 480 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 IL17RELQ6ZVW7 336 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 SSX7Q7RTT5 188 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 CENPVQ7Z7K6 275 aaPredicted RBP6.57□□□□□ -1.36
GTF3A-206ENST00000470606 ZNF114Q8NC26 417 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 OR2T6Q8NHC8 308 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 RBM14Q96PK6 669 aaKnown RBP6.57□□□□□ -1.36
GTF3A-206ENST00000470606 MGST2Q99735 147 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 NPCDR1Q9BY65 106 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 FAM96BQ9Y3D0 163 aa6.57□□□□□ -1.36
GTF3A-206ENST00000470606 A6NDX4 124 aa6.56□□□□□ -1.36
GTF3A-206ENST00000470606 ZNF705EA8MWA4 302 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms