RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 C1QTNF4Q9BXJ3 329 aa8.48□□□□□ -1.05
LSM2-209ENST00000470083 PLGRKTQ9HBL7 147 aa8.48□□□□□ -1.05
LSM2-209ENST00000470083 TAS2R8Q9NYW2 309 aa8.48□□□□□ -1.05
LSM2-209ENST00000470083 IGKV1D-8A0A087WSZ0 117 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 IGKV1D-13A0A0B4J2D9 117 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 EFCAB10A6NFE3 127 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 J3QL48 77 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 K7EQG2 157 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 UPK2O00526 184 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 APOHP02749 345 aaPredicted RBP8.47□□□□□ -1.05
LSM2-209ENST00000470083 ZNF688P0C7X2 276 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 TRAPPC2P0DI81 140 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 TRAPPC2BP0DI82 140 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 IGKV1-13P0DP09 117 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 HTN3P15516 51 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 NFYAP23511 347 aaPredicted RBP8.47□□□□□ -1.05
LSM2-209ENST00000470083 EMP1P54849 157 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 RAB11BQ15907 218 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 POU2AF1Q16633 256 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 HSD17B12Q53GQ0 312 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 MS4A15Q8N5U1 240 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 C15orf53Q8NAA6 179 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 NIPSNAP3BQ9BS92 247 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 NXF2Q9GZY0 626 aaKnown RBP8.47□□□□□ -1.05
LSM2-209ENST00000470083 DKK2Q9UBU2 259 aa8.47□□□□□ -1.05
LSM2-209ENST00000470083 IGHV3-66A0A0C4DH42 116 aa8.46□□□□□ -1.06
LSM2-209ENST00000470083 ERICH4A6NGS2 130 aa8.46□□□□□ -1.06
LSM2-209ENST00000470083 MFNGO00587 321 aa8.46□□□□□ -1.06
LSM2-209ENST00000470083 GNB3P16520 340 aa8.46□□□□□ -1.06
LSM2-209ENST00000470083 BTF3P20290 206 aaKnown RBP8.46□□□□□ -1.06
LSM2-209ENST00000470083 FGF9P31371 208 aaPredicted RBP8.46□□□□□ -1.06
LSM2-209ENST00000470083 XGP55808 180 aa8.46□□□□□ -1.06
LSM2-209ENST00000470083 TAS2R31P59538 309 aa8.46□□□□□ -1.06
LSM2-209ENST00000470083 NUTF2P61970 127 aaKnown RBP8.46□□□□□ -1.06
LSM2-209ENST00000470083 OXA1LQ15070 435 aa8.46□□□□□ -1.06
LSM2-209ENST00000470083 ZNF705AQ6ZN79 300 aaPredicted RBP8.46□□□□□ -1.06
LSM2-209ENST00000470083 GFI1Q99684 422 aa8.46□□□□□ -1.06
LSM2-209ENST00000470083 XCL2Q9UBD3 114 aa8.46□□□□□ -1.06
LSM2-209ENST00000470083 SMIM9A6NGZ8 99 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 ZNF705FA8MVS1 300 aaPredicted RBP8.45□□□□□ -1.06
LSM2-209ENST00000470083 RBFOX2O43251 390 aaKnown RBP eCLIP8.45□□□□□ -1.06
LSM2-209ENST00000470083 DENRO43583 198 aaKnown RBP8.45□□□□□ -1.06
LSM2-209ENST00000470083 UCHL1P09936 223 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 CTXN2P0C2S0 81 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 ZNF705DP0CH99 300 aaPredicted RBP8.45□□□□□ -1.06
LSM2-209ENST00000470083 ZNF705BP0CI00 300 aaPredicted RBP8.45□□□□□ -1.06
LSM2-209ENST00000470083 NQO2P16083 231 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 WNT4P56705 351 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 ST3GAL4Q11206 333 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 FAM222AQ5U5X8 452 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 TOMM20LQ6UXN7 152 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 SPAG16Q8N0X2 631 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 STXBP6Q8NFX7 210 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 OR1L8Q8NGR8 309 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 PYDC1Q8WXC3 89 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 LSM10Q969L4 123 aaKnown RBP8.45□□□□□ -1.06
LSM2-209ENST00000470083 FAM3DQ96BQ1 224 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 GPHA2Q96T91 129 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 TXN2Q99757 166 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 DCSTAMPQ9H295 470 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 TMEM231Q9H6L2 316 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 TMEM140Q9NV12 185 aa8.45□□□□□ -1.06
LSM2-209ENST00000470083 MYL12BO14950 172 aa8.44□□□□□ -1.06
LSM2-209ENST00000470083 HIST1H1DP16402 221 aaKnown RBP8.44□□□□□ -1.06
LSM2-209ENST00000470083 TALDO1P37837 337 aa8.44□□□□□ -1.06
LSM2-209ENST00000470083 MFAP4P55083 255 aa8.44□□□□□ -1.06
LSM2-209ENST00000470083 CLDN12P56749 244 aa8.44□□□□□ -1.06
LSM2-209ENST00000470083 RCN1Q15293 331 aa8.44□□□□□ -1.06
LSM2-209ENST00000470083 C2orf76Q3KRA6 126 aa8.44□□□□□ -1.06
LSM2-209ENST00000470083 OR10R2Q8NGX6 335 aa8.44□□□□□ -1.06
LSM2-209ENST00000470083 RAB40CQ96S21 281 aa8.44□□□□□ -1.06
LSM2-209ENST00000470083 NDUFA4L2Q9NRX3 87 aa8.44□□□□□ -1.06
LSM2-209ENST00000470083 RAB22AQ9UL26 194 aa8.44□□□□□ -1.06
LSM2-209ENST00000470083 RFNGQ9Y644 331 aa8.44□□□□□ -1.06
LSM2-209ENST00000470083 A0A075B6Q4 140 aa8.43□□□□□ -1.06
LSM2-209ENST00000470083 TMEM272A0A1B0GTI8 110 aa8.43□□□□□ -1.06
LSM2-209ENST00000470083 TEX50A0A1B0GTY4 177 aa8.43□□□□□ -1.06
LSM2-209ENST00000470083 I3L2K1 104 aa8.43□□□□□ -1.06
LSM2-209ENST00000470083 HPRT1P00492 218 aa8.43□□□□□ -1.06
LSM2-209ENST00000470083 DTYMKP23919 212 aa8.43□□□□□ -1.06
LSM2-209ENST00000470083 GADD45AP24522 165 aa8.43□□□□□ -1.06
LSM2-209ENST00000470083 OR1P1Q8NH06 330 aa8.43□□□□□ -1.06
LSM2-209ENST00000470083 DCANP1Q8TF63 244 aa8.43□□□□□ -1.06
LSM2-209ENST00000470083 SLC25A46Q96AG3 418 aa8.43□□□□□ -1.06
LSM2-209ENST00000470083 TNFSF12O43508 249 aa8.42□□□□□ -1.06
LSM2-209ENST00000470083 GNG7O60262 68 aa8.42□□□□□ -1.06
LSM2-209ENST00000470083 RANBP1P43487 201 aa8.42□□□□□ -1.06
LSM2-209ENST00000470083 MSMO1Q15800 293 aa8.42□□□□□ -1.06
LSM2-209ENST00000470083 DMBX1Q8NFW5 382 aa8.42□□□□□ -1.06
LSM2-209ENST00000470083 C9orf16Q9BUW7 83 aa8.42□□□□□ -1.06
LSM2-209ENST00000470083 HINT2Q9BX68 163 aa8.42□□□□□ -1.06
LSM2-209ENST00000470083 ZFAND3Q9H8U3 227 aa8.42□□□□□ -1.06
LSM2-209ENST00000470083 PTTG2Q9NZH5 202 aa8.42□□□□□ -1.06
LSM2-209ENST00000470083 AK6Q9Y3D8 172 aaKnown RBP8.42□□□□□ -1.06
LSM2-209ENST00000470083 A0A1W2PS18 150 aa8.41□□□□□ -1.06
LSM2-209ENST00000470083 SULT1C2O00338 296 aa8.41□□□□□ -1.06
LSM2-209ENST00000470083 CCL18P55774 89 aa8.41□□□□□ -1.06
LSM2-209ENST00000470083 LINC01559Q495D7 138 aa8.41□□□□□ -1.06
LSM2-209ENST00000470083 KCTD21Q4G0X4 260 aa8.41□□□□□ -1.06
LSM2-209ENST00000470083 PSMG4Q5JS54 123 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms