RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 TGFAP01135 160 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 STAG3L3P0CL85 134 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 TFF3Q07654 80 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 C17orf82Q86X59 251 aaPredicted RBP13.23□□□□□ -0.29
BRAT1-204ENST00000469750 RNASEH2CQ8TDP1 164 aaKnown RBP13.23□□□□□ -0.29
BRAT1-204ENST00000469750 YPEL2Q96QA6 119 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 VKORC1Q9BQB6 163 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 IGHV3-49A0A0A0MS15 119 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 MAJINQ3KP22 176 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 NEUROG3Q9Y4Z2 214 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 SNRNP200O75643 2136 aaKnown RBP13.23□□□□□ -0.29
BRAT1-204ENST00000469750 LINC00271P0C7V0 271 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 KIAA1644Q3SXP7 199 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 TEX45Q8NA69 505 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 OR10AG1Q8NH19 301 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 GPR183P32249 361 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 PMCHL2Q9BQD1 86 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 OR10S1Q8NGN2 331 aa13.22□□□□□ -0.29
BRAT1-204ENST00000469750 CGAP01215 116 aa13.22□□□□□ -0.29
BRAT1-204ENST00000469750 KIR2DL4Q99706 377 aa13.22□□□□□ -0.29
BRAT1-204ENST00000469750 CARHSP1Q9Y2V2 147 aaKnown RBP13.22□□□□□ -0.29
BRAT1-204ENST00000469750 DOCK6Q96HP0 2047 aa13.22□□□□□ -0.29
BRAT1-204ENST00000469750 SAA2-SAA4A0A096LPE2 208 aa13.22□□□□□ -0.29
BRAT1-204ENST00000469750 IGHV1-18A0A0C4DH31 117 aa13.22□□□□□ -0.29
BRAT1-204ENST00000469750 SAA2P0DJI9 122 aaPredicted RBP13.22□□□□□ -0.29
BRAT1-204ENST00000469750 SCGB1A1P11684 91 aa13.22□□□□□ -0.29
BRAT1-204ENST00000469750 NUTF2P61970 127 aaKnown RBP13.22□□□□□ -0.29
BRAT1-204ENST00000469750 GTF3AQ92664 365 aaKnown RBP13.22□□□□□ -0.29
BRAT1-204ENST00000469750 A8MXK9 166 aa13.21□□□□□ -0.29
BRAT1-204ENST00000469750 EMP1P54849 157 aa13.21□□□□□ -0.29
BRAT1-204ENST00000469750 NR2C2APQ86WQ0 139 aa13.21□□□□□ -0.29
BRAT1-204ENST00000469750 IGHV3-66A0A0C4DH42 116 aa13.21□□□□□ -0.29
BRAT1-204ENST00000469750 HBBP68871 147 aa13.21□□□□□ -0.29
BRAT1-204ENST00000469750 TMEM136Q6ZRR5 245 aa13.21□□□□□ -0.29
BRAT1-204ENST00000469750 NDUFAF3Q9BU61 184 aa13.21□□□□□ -0.29
BRAT1-204ENST00000469750 GREB1Q4ZG55 1949 aa13.21□□□□□ -0.29
BRAT1-204ENST00000469750 PRR32B1ATL7 298 aa13.21□□□□□ -0.29
BRAT1-204ENST00000469750 SAA1P0DJI8 122 aaPredicted RBP13.21□□□□□ -0.29
BRAT1-204ENST00000469750 FOLR2P14207 255 aa13.21□□□□□ -0.29
BRAT1-204ENST00000469750 ERASQ7Z444 233 aa13.21□□□□□ -0.29
BRAT1-204ENST00000469750 MBD3L1Q8WWY6 194 aa13.21□□□□□ -0.29
BRAT1-204ENST00000469750 TMEM70Q9BUB7 260 aa13.21□□□□□ -0.29
BRAT1-204ENST00000469750 MDC1Q14676 2089 aaKnown RBP13.21□□□□□ -0.3
BRAT1-204ENST00000469750 ZNF497Q6ZNH5 498 aa13.21□□□□□ -0.3
BRAT1-204ENST00000469750 OR4X2Q8NGF9 303 aa13.21□□□□□ -0.3
BRAT1-204ENST00000469750 OR52E5Q8NH55 327 aa13.21□□□□□ -0.3
BRAT1-204ENST00000469750 NBR2O15453 112 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 WNT10AQ9GZT5 417 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 TMEM133Q9H2Q1 129 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 ZNF319Q9P2F9 582 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 TRBV20OR9-2A0A075B6H5 130 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 UPK2O00526 184 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 CEACAM4O75871 244 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 PRSS8Q16651 343 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 SLC25A28Q96A46 364 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 KLK15Q9H2R5 256 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 CLDN16Q9Y5I7 305 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 IGKV1D-13A0A0B4J2D9 117 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 IGKV1-13P0DP09 117 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 CD69Q07108 199 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 LURAP1LQ8IV03 231 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 DOCK4Q8N1I0 1966 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 ESPL1Q14674 2120 aa13.2□□□□□ -0.3
BRAT1-204ENST00000469750 PEX7O00628 323 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 HLA-DRB1P01911 266 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 COX6CP09669 75 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 CLEC19AQ6UXS0 136 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 FAM89BQ8N5H3 189 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 MOB4Q9Y3A3 225 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 TRAV24A0A0B4J272 114 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 LOC107984156A0A0G2JMH3 177 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 J3QRE1 110 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 MST1P26927 711 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 MORN2Q502X0 79 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 ARL17AQ8IVW1 177 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 THBDP07204 575 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 CRYGSP22914 178 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 PAPPA-AS1Q5QFB9 102 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 ZCCHC24Q8N2G6 241 aaKnown RBP13.19□□□□□ -0.3
BRAT1-204ENST00000469750 ZNF525Q8N782 197 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 SOX21Q9Y651 276 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-204ENST00000469750 INTS1Q8N201 2190 aaKnown RBP13.19□□□□□ -0.3
BRAT1-204ENST00000469750 TRPM7Q96QT4 1865 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 A0A087WV48 116 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 EFNA2O43921 213 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 HOXA5P20719 270 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 DNLZQ5SXM8 178 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 FAM169BQ8N8A8 192 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 FGFBP3Q8TAT2 258 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 FAM131CQ96AQ9 280 aa13.19□□□□□ -0.3
BRAT1-204ENST00000469750 LGALS3P17931 250 aaKnown RBP13.18□□□□□ -0.3
BRAT1-204ENST00000469750 GGNQ86UU5 652 aa13.18□□□□□ -0.3
BRAT1-204ENST00000469750 NYNRINQ9P2P1 1898 aaKnown RBP13.18□□□□□ -0.3
BRAT1-204ENST00000469750 C9JCJ5 164 aa13.18□□□□□ -0.3
BRAT1-204ENST00000469750 RBFOX2O43251 390 aaKnown RBP eCLIP13.18□□□□□ -0.33e-6■■■■□ 21.5
BRAT1-204ENST00000469750 OR4D5Q8NGN0 318 aa13.18□□□□□ -0.3
BRAT1-204ENST00000469750 TIMP3P35625 211 aa13.18□□□□□ -0.3
BRAT1-204ENST00000469750 ADIPOQQ15848 244 aa13.18□□□□□ -0.3
BRAT1-204ENST00000469750 RNF222A6NCQ9 220 aa13.18□□□□□ -0.3
BRAT1-204ENST00000469750 TMEM144Q7Z5S9 345 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms