RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 PDLIM3Q53GG5 364 aaPredicted RBP14.04□□□□□ -0.16
MRPL28-208ENST00000469744 KLHDC1Q8N7A1 406 aa14.04□□□□□ -0.16
MRPL28-208ENST00000469744 OR52E5Q8NH55 327 aa14.04□□□□□ -0.16
MRPL28-208ENST00000469744 SCGB1C1Q8TD33 95 aa14.04□□□□□ -0.16
MRPL28-208ENST00000469744 S1PR3Q99500 378 aa14.04□□□□□ -0.16
MRPL28-208ENST00000469744 ZNF702PQ9H963 129 aa14.04□□□□□ -0.16
MRPL28-208ENST00000469744 MARCH11A6NNE9 402 aa14.03□□□□□ -0.16
MRPL28-208ENST00000469744 WIPF1O43516 503 aa14.03□□□□□ -0.16
MRPL28-208ENST00000469744 IGHV3-7P01780 117 aa14.03□□□□□ -0.16
MRPL28-208ENST00000469744 CD24P25063 80 aa14.03□□□□□ -0.16
MRPL28-208ENST00000469744 SRSF3P84103 164 aaKnown RBP14.03□□□□□ -0.16
MRPL28-208ENST00000469744 OR4S2Q8NH73 311 aa14.03□□□□□ -0.16
MRPL28-208ENST00000469744 F8W036 122 aa14.02□□□□□ -0.16
MRPL28-208ENST00000469744 H3BP45 60 aa14.02□□□□□ -0.16
MRPL28-208ENST00000469744 FCGR3BO75015 233 aa14.02□□□□□ -0.16
MRPL28-208ENST00000469744 METTL15P1P0C7V9 234 aa14.02□□□□□ -0.16
MRPL28-208ENST00000469744 NQO2P16083 231 aa14.02□□□□□ -0.16
MRPL28-208ENST00000469744 ERVK-16P61578 105 aa14.02□□□□□ -0.16
MRPL28-208ENST00000469744 ZNF616Q08AN1 781 aa14.02□□□□□ -0.16
MRPL28-208ENST00000469744 HAPLN4Q86UW8 402 aa14.02□□□□□ -0.16
MRPL28-208ENST00000469744 FAM213BQ8TBF2 198 aa14.02□□□□□ -0.16
MRPL28-208ENST00000469744 LEAP2Q969E1 77 aa14.02□□□□□ -0.16
MRPL28-208ENST00000469744 ZNF251Q9BRH9 671 aa14.02□□□□□ -0.16
MRPL28-208ENST00000469744 PBDC1Q9BVG4 233 aa14.02□□□□□ -0.16
MRPL28-208ENST00000469744 CMYA5Q8N3K9 4069 aa14.02□□□□□ -0.17
MRPL28-208ENST00000469744 SLC31A2O15432 143 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 IGLV1-47P01700 117 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 ADCYAP1P18509 176 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 SERF2P84101 59 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 DEFA5Q01523 94 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 ARL16Q0P5N6 197 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 POU2AF1Q16633 256 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 FBLN7Q53RD9 439 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 SPANXN5Q5MJ07 72 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 AKR1C8PQ5T2L2 129 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 Q6ZS46 218 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 SLC25A48Q6ZT89 311 aaKnown RBP14.01□□□□□ -0.17
MRPL28-208ENST00000469744 C8orf31Q8N9H6 132 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 ZNF596Q8TC21 504 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 DTD1Q8TEA8 209 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 SCRT1Q9BWW7 348 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 DPM3Q9P2X0 92 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 PITPNC1Q9UKF7 332 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 TIMM9Q9Y5J7 89 aa14.01□□□□□ -0.17
MRPL28-208ENST00000469744 HBE1P02100 147 aa14□□□□□ -0.17
MRPL28-208ENST00000469744 SPCS3P61009 180 aa14□□□□□ -0.17
MRPL28-208ENST00000469744 AKR1C1Q04828 323 aa14□□□□□ -0.17
MRPL28-208ENST00000469744 SLC38A11Q08AI6 406 aa14□□□□□ -0.17
MRPL28-208ENST00000469744 GUK1Q16774 197 aa14□□□□□ -0.17
MRPL28-208ENST00000469744 RPL39P5Q59GN2 51 aa14□□□□□ -0.17
MRPL28-208ENST00000469744 SLC25A24Q6NUK1 477 aa14□□□□□ -0.17
MRPL28-208ENST00000469744 CENPVQ7Z7K6 275 aaPredicted RBP14□□□□□ -0.17
MRPL28-208ENST00000469744 PUSL1Q8N0Z8 303 aaKnown RBP14□□□□□ -0.17
MRPL28-208ENST00000469744 FAM110DQ8TAY7 271 aaPredicted RBP14□□□□□ -0.17
MRPL28-208ENST00000469744 PINX1Q96BK5 328 aaKnown RBP14□□□□□ -0.17
MRPL28-208ENST00000469744 NKX6-2Q9C056 277 aaPredicted RBP14□□□□□ -0.17
MRPL28-208ENST00000469744 SERTAD4Q9NUC0 356 aa14□□□□□ -0.17
MRPL28-208ENST00000469744 SAA2-SAA4A0A096LPE2 208 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 TRAV1-1A0A0B4J248 108 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 SAA2P0DJI9 122 aaPredicted RBP13.99□□□□□ -0.17
MRPL28-208ENST00000469744 RAB2AP61019 212 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 BLCAPP62952 87 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 RPP30P78346 268 aaKnown RBP13.99□□□□□ -0.17
MRPL28-208ENST00000469744 BTN1A1Q13410 526 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 HLA-DRB5Q30154 266 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 TMEM95Q3KNT9 176 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 ZNF429Q86V71 674 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 LILRB2Q8N423 598 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 WDR61Q9GZS3 305 aaKnown RBP13.99□□□□□ -0.17
MRPL28-208ENST00000469744 A0A087X0M5 115 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 A0A1B0GX30 115 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 PMS2P5A8MQ11 134 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 BUB1B-PAK6H3BSN5 160 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 SNAPINO95295 136 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 OR9G9P0C7N8 305 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 FHITP49789 147 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 LINC00205P59089 165 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 DEFA6Q01524 100 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 TAGLNQ01995 201 aaKnown RBP13.99□□□□□ -0.17
MRPL28-208ENST00000469744 TPTE2P1Q5T6R2 138 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 FAM71F2Q6NXP2 309 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 ATRAIDQ6UW56 229 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 THNSL2Q86YJ6 484 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 LYG1Q8N1E2 194 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 Q8N2B8 174 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 OR4A16Q8NH70 328 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 OR4C12Q96R67 309 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 AIFM2Q9BRQ8 373 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 TMEM147Q9BVK8 224 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 PRSS22Q9GZN4 317 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 TMEM231Q9H6L2 316 aa13.99□□□□□ -0.17
MRPL28-208ENST00000469744 CEBPZOSA8MTT3 80 aa13.98□□□□□ -0.17
MRPL28-208ENST00000469744 AGPAT2O15120 278 aa13.98□□□□□ -0.17
MRPL28-208ENST00000469744 H2AFB1P0C5Y9 115 aa13.98□□□□□ -0.17
MRPL28-208ENST00000469744 GNG10P50151 68 aa13.98□□□□□ -0.17
MRPL28-208ENST00000469744 RUNX1Q01196 453 aa13.98□□□□□ -0.17
MRPL28-208ENST00000469744 VWC2Q2TAL6 325 aa13.98□□□□□ -0.17
MRPL28-208ENST00000469744 ARSJQ5FYB0 599 aaPredicted RBP13.98□□□□□ -0.17
MRPL28-208ENST00000469744 SPSB3Q6PJ21 355 aa13.98□□□□□ -0.17
MRPL28-208ENST00000469744 LINC00311Q8N616 119 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms