RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 MED13Q9UHV7 2174 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 OR51F1A6NGY5 319 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 TNNC2P02585 160 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 SULT1A3P0DMM9 295 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 SULT1A4P0DMN0 295 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 AKR1C3P42330 323 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 OMPP47874 163 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 SULT1A1P50225 295 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 SERPINB9P50453 376 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 DR1Q01658 176 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 PMAIP1Q13794 54 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 GUK1Q16774 197 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 GLT8D1Q68CQ7 371 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 STX12Q86Y82 276 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 TMEM86AQ8N2M4 240 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 CISHQ9NSE2 258 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 DCCP43146 1447 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 ADGRL3Q9HAR2 1447 aa1.3□□□□□ -2.2
VPS8-220ENST00000469713 RALGAPA2Q2PPJ7 1873 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 HEATR5AQ86XA9 2040 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 A0A0J9YY10 115 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 TRBV6-5A0A0K0K1A5 114 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 A0A1B0GX78 115 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 MEIS3P1A6NDR6 274 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 SMIM9A6NGZ8 99 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 TMEM238C9JI98 176 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 CNIH1O95406 144 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 SERPINA1P01009 418 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 IGHV3-7P01780 117 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 CRPP02741 224 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 FGF6P10767 208 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 SPCS3P61009 180 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 SRSF6Q13247 344 aaKnown RBP1.29□□□□□ -2.2
VPS8-220ENST00000469713 TAF1AQ15573 450 aaPredicted RBP1.29□□□□□ -2.2
VPS8-220ENST00000469713 ACOT6Q3I5F7 207 aaPredicted RBP1.29□□□□□ -2.2
VPS8-220ENST00000469713 ARHGAP11BQ3KRB8 267 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 HIST2H3PS2Q5TEC6 136 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 HACD4Q5VWC8 232 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 SPOPLQ6IQ16 392 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 FP248Q71RG6 208 aaPredicted RBP1.29□□□□□ -2.2
VPS8-220ENST00000469713 C9orf163Q8N9P6 203 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 SELENOSQ9BQE4 189 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 KRTAP4-1Q9BYQ7 146 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 EFCAB1Q9HAE3 211 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 IL36BQ9NZH7 164 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 VPS29Q9UBQ0 182 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 TTC21AQ8NDW8 1320 aa1.29□□□□□ -2.2
VPS8-220ENST00000469713 FREM1Q5H8C1 2179 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 TRBV20OR9-2A0A075B6H5 130 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 A0A087WUJ7 227 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 MEIKINA0A087WXM9 373 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 A0A1B0GV50 99 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 EEF1E1-BLOC1S5C9J1V9 151 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 PGRMC1O00264 195 aaKnown RBP1.28□□□□□ -2.2
VPS8-220ENST00000469713 SLC22A1O15245 554 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 FADS1O60427 444 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 NOS1APO75052 506 aaPredicted RBP1.28□□□□□ -2.2
VPS8-220ENST00000469713 FABP1P07148 127 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 ARF6P62330 175 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 RPL18Q07020 188 aaKnown RBP1.28□□□□□ -2.2
VPS8-220ENST00000469713 GRK1Q15835 563 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 NNATQ16517 81 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 Q1T7F1 81 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 PPP1R2P1Q96PQ5 205 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 TLNRD1Q9H1K6 362 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 MRPL40Q9NQ50 206 aaKnown RBP1.28□□□□□ -2.2
VPS8-220ENST00000469713 CMTM6Q9NX76 183 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 WRNQ14191 1432 aaPredicted RBP eCLIP1.28□□□□□ -2.2
VPS8-220ENST00000469713 PCDH15Q96QU1 1955 aa1.28□□□□□ -2.2
VPS8-220ENST00000469713 BAZ2BQ9UIF8 2168 aaKnown RBP1.27□□□□□ -2.21
VPS8-220ENST00000469713 MAST2Q6P0Q8 1798 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 PCF11O94913 1555 aaKnown RBP1.27□□□□□ -2.21
VPS8-220ENST00000469713 CCDC144AA2RUR9 1427 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 MTUS2Q5JR59 1369 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 KIF24Q5T7B8 1368 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 TRBV10-2A0A0K0K1G8 114 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 IBA57-AS1B1ANH7 110 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 HAND1O96004 215 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 C1QAP02745 245 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 PRM2P04554 102 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 RPSAP08865 295 aaKnown RBP1.27□□□□□ -2.21
VPS8-220ENST00000469713 HIST1H1TP22492 207 aaPredicted RBP1.27□□□□□ -2.21
VPS8-220ENST00000469713 RUNX1Q01196 453 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 TMED2Q15363 201 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 SNCBQ16143 134 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 OR6V1Q8N148 313 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 MBD3L1Q8WWY6 194 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 AP3S1Q92572 193 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 CEP19Q96LK0 163 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 OR52E6Q96RD3 313 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 HOPXQ9BPY8 73 aaPredicted RBP1.27□□□□□ -2.21
VPS8-220ENST00000469713 GID8Q9NWU2 228 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 MRPL27Q9P0M9 148 aaKnown RBP1.27□□□□□ -2.21
VPS8-220ENST00000469713 PKIGQ9Y2B9 76 aa1.27□□□□□ -2.21
VPS8-220ENST00000469713 HECW2Q9P2P5 1572 aa1.26□□□□□ -2.21
VPS8-220ENST00000469713 PQLC2LA1A4F0 135 aa1.26□□□□□ -2.21
VPS8-220ENST00000469713 E5RI56 91 aa1.26□□□□□ -2.21
VPS8-220ENST00000469713 PSMD12O00232 456 aaPredicted RBP1.26□□□□□ -2.21
VPS8-220ENST00000469713 OR4E1P0C645 316 aa1.26□□□□□ -2.21
VPS8-220ENST00000469713 LYNX1P0DP58 116 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms