RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 NPIPB11E5RHQ5 1161 aa11.47□□□□□ -0.57
GPC1-208ENST00000469694 K7EN84 100 aa11.47□□□□□ -0.57
GPC1-208ENST00000469694 ZNF324O75467 553 aaPredicted RBP11.47□□□□□ -0.57
GPC1-208ENST00000469694 RPS16P62249 146 aaKnown RBP11.47□□□□□ -0.57
GPC1-208ENST00000469694 PNKDQ8N490 385 aa11.47□□□□□ -0.57
GPC1-208ENST00000469694 NUDT10Q8NFP7 164 aa11.47□□□□□ -0.57
GPC1-208ENST00000469694 VPS25Q9BRG1 176 aa11.47□□□□□ -0.57
GPC1-208ENST00000469694 PIEZO1Q92508 2521 aa11.47□□□□□ -0.57
GPC1-208ENST00000469694 A0A0G2JNJ9 132 aa11.47□□□□□ -0.57
GPC1-208ENST00000469694 MMD2Q8IY49 270 aa11.47□□□□□ -0.57
GPC1-208ENST00000469694 Q9UFV3 132 aa11.47□□□□□ -0.57
GPC1-208ENST00000469694 A0A1W2PPV4 95 aa11.46□□□□□ -0.57
GPC1-208ENST00000469694 J3QW42 95 aa11.46□□□□□ -0.57
GPC1-208ENST00000469694 RPEL1Q2QD12 228 aa11.46□□□□□ -0.57
GPC1-208ENST00000469694 MAJINQ3KP22 176 aa11.46□□□□□ -0.57
GPC1-208ENST00000469694 FAM53AQ6NSI3 398 aaPredicted RBP11.46□□□□□ -0.57
GPC1-208ENST00000469694 TMEM204Q9BSN7 226 aa11.46□□□□□ -0.57
GPC1-208ENST00000469694 RBM7Q9Y580 266 aaKnown RBP11.46□□□□□ -0.57
GPC1-208ENST00000469694 S1PR2O95136 353 aa11.46□□□□□ -0.57
GPC1-208ENST00000469694 C19orf35Q6ZS72 473 aa11.46□□□□□ -0.57
GPC1-208ENST00000469694 OR4F17Q8NGA8 305 aa11.46□□□□□ -0.57
GPC1-208ENST00000469694 NAT8BQ9UHF3 227 aa11.46□□□□□ -0.57
GPC1-208ENST00000469694 KCNS2Q9ULS6 477 aa11.46□□□□□ -0.57
GPC1-208ENST00000469694 LRRC30A6NM36 301 aa11.46□□□□□ -0.58
GPC1-208ENST00000469694 PRRG2O14669 202 aa11.46□□□□□ -0.58
GPC1-208ENST00000469694 ZG16O60844 167 aa11.46□□□□□ -0.58
GPC1-208ENST00000469694 RHOGP84095 191 aa11.46□□□□□ -0.58
GPC1-208ENST00000469694 HTD2P86397 168 aa11.46□□□□□ -0.58
GPC1-208ENST00000469694 ATOH7Q8N100 152 aa11.46□□□□□ -0.58
GPC1-208ENST00000469694 PKIBQ9C010 78 aa11.46□□□□□ -0.58
GPC1-208ENST00000469694 CA2P00918 260 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 MT-ND6P03923 174 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 RPS20P60866 119 aaKnown RBP11.45□□□□□ -0.58
GPC1-208ENST00000469694 VAMP3Q15836 100 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 KIAA1644Q3SXP7 199 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 OCIAD2Q56VL3 154 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 SPRNQ5BIV9 151 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 OR8I2Q8N0Y5 310 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 CST9LQ9H4G1 147 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 RNF24Q9Y225 148 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 OR2H2O95918 312 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 PMCHL1Q16048 86 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 STUMQ69YW2 141 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 C11orf53Q8IXP5 236 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 MUC15Q8N387 334 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 DRAM1Q8N682 238 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 CSTL1Q9H114 145 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.45□□□□□ -0.58
GPC1-208ENST00000469694 V9GYV3 84 aa11.45□□□□□ -0.58
GPC1-208ENST00000469694 P0C879 139 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 ARL14EPLP0DKL9 152 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 ERVK11-1P61568 191 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 ZNF718Q3SXZ3 478 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 TIMM23BQ5SRD1 257 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 LDLRAD2Q5SZI1 272 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 Q6P435 159 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 WDR73Q6P4I2 378 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 CORO2AQ92828 525 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 ZDHHC16Q969W1 377 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 MRPL27Q9P0M9 148 aaKnown RBP11.44□□□□□ -0.58
GPC1-208ENST00000469694 WDR83OSQ9Y284 106 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 ODAMA1E959 279 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 G6PCP35575 357 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 EDDM3BP56851 147 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 TMEM136Q6ZRR5 245 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 FAM19A2Q8N3H0 131 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 SLC24A4Q8NFF2 622 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 OR2Z1Q8NG97 314 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 TSKUQ8WUA8 353 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 BORCS7Q96B45 105 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 CLEC7AQ9BXN2 247 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 COL6A6A6NMZ7 2263 aa11.44□□□□□ -0.58
GPC1-208ENST00000469694 RNF212BA8MTL3 300 aa11.43□□□□□ -0.58
GPC1-208ENST00000469694 STAG3L2P0CL84 134 aa11.43□□□□□ -0.58
GPC1-208ENST00000469694 STAG3L3P0CL85 134 aa11.43□□□□□ -0.58
GPC1-208ENST00000469694 RPL31P62899 125 aaKnown RBP11.43□□□□□ -0.58
GPC1-208ENST00000469694 RPL19P84098 196 aaKnown RBP11.43□□□□□ -0.58
GPC1-208ENST00000469694 LINC00596Q86U02 117 aa11.43□□□□□ -0.58
GPC1-208ENST00000469694 LY96Q9Y6Y9 160 aa11.43□□□□□ -0.58
GPC1-208ENST00000469694 ITPR1Q14643 2758 aa11.43□□□□□ -0.58
GPC1-208ENST00000469694 RAMP3O60896 148 aa11.43□□□□□ -0.58
GPC1-208ENST00000469694 CX3CL1P78423 397 aa11.43□□□□□ -0.58
GPC1-208ENST00000469694 LCN12Q6JVE5 192 aa11.43□□□□□ -0.58
GPC1-208ENST00000469694 POLDIP2Q9Y2S7 368 aa11.43□□□□□ -0.58
GPC1-208ENST00000469694 PKDREJQ9NTG1 2253 aa11.43□□□□□ -0.58
GPC1-208ENST00000469694 TRAV9-2A0A087WT02 112 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 C9JCJ5 164 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 PSPNO60542 156 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 LRRC10Q5BKY1 277 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 OR4P4Q8NGL7 312 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 EAF1Q96JC9 268 aaPredicted RBP11.42□□□□□ -0.58
GPC1-208ENST00000469694 YTHDF2Q9Y5A9 579 aaKnown RBP11.42□□□□□ -0.58
GPC1-208ENST00000469694 POLEQ07864 2286 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 RRHO14718 337 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 SPINK4O60575 86 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 CXorf1O96002 111 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 CD1BP29016 333 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 SRIP30626 198 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 TMPRSS3P57727 454 aa11.42□□□□□ -0.58
GPC1-208ENST00000469694 RHOBP62745 196 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms