RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 ZNF714Q96N38 554 aa15.52■□□□□ 0.08
VIM-203ENST00000469543 PLAUP00749 431 aa15.52■□□□□ 0.07
VIM-203ENST00000469543 LINC00869P0C866 280 aa15.52■□□□□ 0.07
VIM-203ENST00000469543 APELAP0DMC3 54 aa15.52■□□□□ 0.07
VIM-203ENST00000469543 NBL1P41271 181 aa15.52■□□□□ 0.07
VIM-203ENST00000469543 OR2T6Q8NHC8 308 aa15.52■□□□□ 0.07
VIM-203ENST00000469543 HARBI1Q96MB7 349 aa15.52■□□□□ 0.07
VIM-203ENST00000469543 FUT9Q9Y231 359 aa15.52■□□□□ 0.07
VIM-203ENST00000469543 AKAP6Q13023 2319 aa15.52■□□□□ 0.07
VIM-203ENST00000469543 TRAV20A0A0B4J274 112 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 DVL1O14640 695 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 SSBP2P81877 361 aaPredicted RBP15.51■□□□□ 0.07
VIM-203ENST00000469543 GAMTQ14353 236 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 RTL8BQ17RB0 113 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 ASPHD1Q5U4P2 390 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 OCC1Q8TAD7 63 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 SRD5A3Q9H8P0 318 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 MAP1AP78559 2803 aaPredicted RBP15.51■□□□□ 0.07
VIM-203ENST00000469543 E7EQL1 145 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 CXorf1O96002 111 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 OR10J4P0C629 311 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 GCHFRP30047 84 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 PRCDQ00LT1 54 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 RNASE6Q93091 150 aaKnown RBP15.51■□□□□ 0.07
VIM-203ENST00000469543 PYGO2Q9BRQ0 406 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 OR51M1Q9H341 326 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 TMEM106BQ9NUM4 274 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 ZFHX3Q15911 3703 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 PDE6DO43924 150 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 TBR1Q16650 682 aa15.51■□□□□ 0.07
VIM-203ENST00000469543 H0YJW9 148 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 GRNP28799 593 aaKnown RBP15.5■□□□□ 0.07
VIM-203ENST00000469543 LGALS4P56470 323 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 CTAG1AP78358 180 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 PRR20EP86478 221 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 PRR20CP86479 221 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 PRR20DP86480 221 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 PRR20BP86481 221 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 PRR20AP86496 221 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 LHFPL4Q7Z7J7 247 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 OR2T10Q8NGZ9 312 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 ADTRPQ96IZ2 230 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 TPSG1Q9NRR2 321 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 KCNIP2Q9NS61 270 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 ELOVL5Q9NYP7 299 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 PRNDQ9UKY0 176 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 NKX6-3A6NJ46 265 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 IGHV2-70P01814 119 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 MORN5Q5VZ52 161 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 ZNF833PQ6ZTB9 187 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 OR10X1Q8NGY0 326 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 HIST1H2BLQ99880 126 aa15.5■□□□□ 0.07
VIM-203ENST00000469543 A0A1B0GUS0 222 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 SHISA9B4DS77 424 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 OR10J1P30954 320 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 POU2AF1Q16633 256 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 HLA-DRB5Q30154 266 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 DMRTC2Q8IXT2 367 aaPredicted RBP15.49■□□□□ 0.07
VIM-203ENST00000469543 LINC01560Q8TB33 94 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 NABP2Q9BQ15 211 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 RAB9BQ9NP90 201 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 JKAMPQ9P055 326 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 REG1AP05451 166 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 PSG5Q15238 335 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 RUSC1-AS1Q66K80 236 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 C19orf35Q6ZS72 473 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 ACY3Q96HD9 319 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 GAL3ST2Q9H3Q3 398 aa15.49■□□□□ 0.07
VIM-203ENST00000469543 SLC17A3O00476 420 aa15.48■□□□□ 0.07
VIM-203ENST00000469543 RPL29P47914 159 aaKnown RBP15.48■□□□□ 0.07
VIM-203ENST00000469543 S100A12P80511 92 aa15.48■□□□□ 0.07
VIM-203ENST00000469543 SGMS2Q8NHU3 365 aa15.48■□□□□ 0.07
VIM-203ENST00000469543 K7EN84 100 aa15.48■□□□□ 0.07
VIM-203ENST00000469543 VENTXO95231 258 aa15.48■□□□□ 0.07
VIM-203ENST00000469543 FRMD6-AS1P0C7T7 363 aa15.48■□□□□ 0.07
VIM-203ENST00000469543 RNASE2P10153 161 aaKnown RBP15.48■□□□□ 0.07
VIM-203ENST00000469543 OR5I1Q13606 314 aa15.48■□□□□ 0.07
VIM-203ENST00000469543 SPTAN1Q13813 2472 aaKnown RBP15.48■□□□□ 0.07
VIM-203ENST00000469543 C9orf152Q5JTZ5 239 aa15.48■□□□□ 0.07
VIM-203ENST00000469543 ANAPC16Q96DE5 110 aa15.48■□□□□ 0.07
VIM-203ENST00000469543 ZNF503Q96F45 646 aa15.48■□□□□ 0.07
VIM-203ENST00000469543 COMMD5Q9GZQ3 224 aa15.48■□□□□ 0.07
VIM-203ENST00000469543 DYNLRB1Q9NP97 96 aa15.48■□□□□ 0.07
VIM-203ENST00000469543 SLC45A2Q9UMX9 530 aa15.48■□□□□ 0.07
VIM-203ENST00000469543 VPS13CQ709C8 3753 aa15.47■□□□□ 0.07
VIM-203ENST00000469543 TRAV5A0A0B4J249 113 aa15.47■□□□□ 0.07
VIM-203ENST00000469543 IL3RAP26951 378 aa15.47■□□□□ 0.07
VIM-203ENST00000469543 RHOBP62745 196 aa15.47■□□□□ 0.07
VIM-203ENST00000469543 FLYWCH2Q96CP2 140 aaKnown RBP15.47■□□□□ 0.07
VIM-203ENST00000469543 ZNF320A2RRD8 509 aa15.47■□□□□ 0.07
VIM-203ENST00000469543 XKRY2A2RUG3 117 aa15.47■□□□□ 0.07
VIM-203ENST00000469543 CGB1A6NKQ9 187 aa15.47■□□□□ 0.07
VIM-203ENST00000469543 NDUFB3O43676 98 aa15.47■□□□□ 0.07
VIM-203ENST00000469543 NUBP1P53384 320 aa15.47■□□□□ 0.07
VIM-203ENST00000469543 WT1-ASQ06250 92 aa15.47■□□□□ 0.07
VIM-203ENST00000469543 SFRP2Q96HF1 295 aa15.47■□□□□ 0.07
VIM-203ENST00000469543 PACRGQ96M98 296 aaPredicted RBP15.47■□□□□ 0.07
VIM-203ENST00000469543 LY86O95711 162 aa15.46■□□□□ 0.07
VIM-203ENST00000469543 LOXP28300 417 aaPredicted RBP15.46■□□□□ 0.07
VIM-203ENST00000469543 OR5AN1Q8NGI8 311 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms