RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ITGB1BP1O14713 200 aa11.42□□□□□ -0.58
COL27A1-203ENST00000468565 BTNL8Q6UX41 500 aa11.42□□□□□ -0.58
COL27A1-203ENST00000468565 Q6ZRG5 221 aa11.42□□□□□ -0.58
COL27A1-203ENST00000468565 SLC35E3Q7Z769 313 aa11.42□□□□□ -0.58
COL27A1-203ENST00000468565 SVBPQ8N300 66 aa11.42□□□□□ -0.58
COL27A1-203ENST00000468565 GPHA2Q96T91 129 aa11.42□□□□□ -0.58
COL27A1-203ENST00000468565 IFI27L2Q9H2X8 130 aa11.42□□□□□ -0.58
COL27A1-203ENST00000468565 WRBO00258 174 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 SSSCA1O60232 199 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 SLC25A6P12236 298 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 RAB5CP51148 216 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 AKR1C2P52895 323 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 ID3Q02535 119 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 NHLH2Q02577 135 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 AKR1C1Q04828 323 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 OR51H1Q8NH63 302 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 S1PR3Q99500 378 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 NABP2Q9BQ15 211 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 NKX6-2Q9C056 277 aaPredicted RBP11.41□□□□□ -0.58
COL27A1-203ENST00000468565 SAV1Q9H4B6 383 aaPredicted RBP11.41□□□□□ -0.58
COL27A1-203ENST00000468565 BIN3Q9NQY0 253 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 STRAPQ9Y3F4 350 aaKnown RBP11.41□□□□□ -0.58
COL27A1-203ENST00000468565 SAA2-SAA4A0A096LPE2 208 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 A0A1B0GU03 582 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 FAM24AA6NFZ4 105 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 A6NJY4 79 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 H7C2Y5 167 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 J3QL48 77 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 PITX3O75364 302 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 SAA2P0DJI9 122 aaPredicted RBP11.41□□□□□ -0.58
COL27A1-203ENST00000468565 SPP1P10451 314 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 MEOX2P50222 304 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 ZNF266Q14584 549 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 CXorf66Q5JRM2 361 aaPredicted RBP11.41□□□□□ -0.58
COL27A1-203ENST00000468565 ATRAIDQ6UW56 229 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 C10orf99Q6UWK7 81 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 LILRB2Q8N423 598 aa11.41□□□□□ -0.58
COL27A1-203ENST00000468565 RNASE11Q8TAA1 199 aaKnown RBP11.41□□□□□ -0.58
COL27A1-203ENST00000468565 LYRM2Q9NU23 88 aaPredicted RBP11.41□□□□□ -0.58
COL27A1-203ENST00000468565 CARHSP1Q9Y2V2 147 aaKnown RBP11.41□□□□□ -0.58
COL27A1-203ENST00000468565 GPR12P47775 334 aa11.4□□□□□ -0.58
COL27A1-203ENST00000468565 FAM209BQ5JX69 171 aa11.4□□□□□ -0.58
COL27A1-203ENST00000468565 C10orf91Q5T1B1 145 aa11.4□□□□□ -0.58
COL27A1-203ENST00000468565 COMMD1Q8N668 190 aa11.4□□□□□ -0.58
COL27A1-203ENST00000468565 EDARADDQ8WWZ3 215 aa11.4□□□□□ -0.58
COL27A1-203ENST00000468565 RASL11BQ9BPW5 248 aa11.4□□□□□ -0.58
COL27A1-203ENST00000468565 MRPL20Q9BYC9 149 aaKnown RBP11.4□□□□□ -0.58
COL27A1-203ENST00000468565 MAGT1Q9H0U3 335 aa11.4□□□□□ -0.58
COL27A1-203ENST00000468565 ZFAND3Q9H8U3 227 aa11.4□□□□□ -0.58
COL27A1-203ENST00000468565 UQCC1Q9NVA1 299 aa11.4□□□□□ -0.58
COL27A1-203ENST00000468565 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
COL27A1-203ENST00000468565 A0A1W2PRX2 142 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 IGSF23A1L1A6 192 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 AP4M1O00189 453 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 RAB29O14966 203 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 ST8SIA5O15466 376 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 H2AFB1P0C5Y9 115 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 CEACAM6P40199 344 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 SLC35B1P78383 322 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 SRSF3P84103 164 aaKnown RBP11.39□□□□□ -0.59
COL27A1-203ENST00000468565 BAXQ07812 192 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 PDLIM3Q53GG5 364 aaPredicted RBP11.39□□□□□ -0.59
COL27A1-203ENST00000468565 SAMD5Q5TGI4 173 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 TMEM252Q8N6L7 170 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 LSM10Q969L4 123 aaKnown RBP11.39□□□□□ -0.59
COL27A1-203ENST00000468565 NOL4LQ96MY1 436 aaPredicted RBP11.39□□□□□ -0.59
COL27A1-203ENST00000468565 ZNF251Q9BRH9 671 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 SEC11CQ9BY50 192 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 COA4Q9NYJ1 87 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 NOTCH3Q9UM47 2321 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 PF4V1P10720 104 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 CAMLGP49069 296 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 LYPD6BQ8NI32 183 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 GPR146Q96CH1 333 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 AGMATQ9BSE5 352 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 TMEM231Q9H6L2 316 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 ZNF580Q9UK33 172 aa11.39□□□□□ -0.59
COL27A1-203ENST00000468565 DNASE2O00115 360 aaPredicted RBP11.38□□□□□ -0.59
COL27A1-203ENST00000468565 PRH1P02810 166 aa11.38□□□□□ -0.59
COL27A1-203ENST00000468565 OR8U9P0C7N5 309 aa11.38□□□□□ -0.59
COL27A1-203ENST00000468565 SMIM6P0DI80 62 aa11.38□□□□□ -0.59
COL27A1-203ENST00000468565 KPRPQ5T749 579 aaPredicted RBP11.38□□□□□ -0.59
COL27A1-203ENST00000468565 ZNF329Q86UD4 541 aa11.38□□□□□ -0.59
COL27A1-203ENST00000468565 C1QL4Q86Z23 238 aa11.38□□□□□ -0.59
COL27A1-203ENST00000468565 HSD17B11Q8NBQ5 300 aa11.38□□□□□ -0.59
COL27A1-203ENST00000468565 ZBTB34Q8NCN2 500 aa11.38□□□□□ -0.59
COL27A1-203ENST00000468565 OR8U1Q8NH10 309 aa11.38□□□□□ -0.59
COL27A1-203ENST00000468565 TOLLIPQ9H0E2 274 aa11.38□□□□□ -0.59
COL27A1-203ENST00000468565 PARP12Q9H0J9 701 aaKnown RBP11.38□□□□□ -0.59
COL27A1-203ENST00000468565 CACFD1Q9UGQ2 172 aa11.38□□□□□ -0.59
COL27A1-203ENST00000468565 LINC01548A6NM66 108 aa11.37□□□□□ -0.59
COL27A1-203ENST00000468565 G3V4G9 280 aa11.37□□□□□ -0.59
COL27A1-203ENST00000468565 IGLV2-14P01704 120 aa11.37□□□□□ -0.59
COL27A1-203ENST00000468565 ADCYAP1P18509 176 aa11.37□□□□□ -0.59
COL27A1-203ENST00000468565 AKR1D1P51857 326 aa11.37□□□□□ -0.59
COL27A1-203ENST00000468565 RPL23AP62750 156 aaKnown RBP11.37□□□□□ -0.59
COL27A1-203ENST00000468565 MMDQ15546 238 aa11.37□□□□□ -0.59
COL27A1-203ENST00000468565 BEAN1Q3B7T3 259 aa11.37□□□□□ -0.59
COL27A1-203ENST00000468565 KHDC1LQ5JSQ8 128 aa11.37□□□□□ -0.59
COL27A1-203ENST00000468565 RAB40CQ96S21 281 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms