RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 LPAR6P43657 344 aa14.46□□□□□ -0.09
COL7A1-207ENST00000467985 OR51S1Q8NGJ8 323 aa14.46□□□□□ -0.09
COL7A1-207ENST00000467985 OR1L8Q8NGR8 309 aa14.46□□□□□ -0.09
COL7A1-207ENST00000467985 TUBA4BQ9H853 241 aa14.46□□□□□ -0.09
COL7A1-207ENST00000467985 SNAPC5O75971 98 aa14.45□□□□□ -0.1
COL7A1-207ENST00000467985 KRASP01116 189 aa14.45□□□□□ -0.1
COL7A1-207ENST00000467985 IGHV3-23P01764 117 aa14.45□□□□□ -0.1
COL7A1-207ENST00000467985 RPA2P15927 270 aa14.45□□□□□ -0.1
COL7A1-207ENST00000467985 DEFA1P59665 94 aa14.45□□□□□ -0.1
COL7A1-207ENST00000467985 DEFA3P59666 94 aa14.45□□□□□ -0.1
COL7A1-207ENST00000467985 CD300EQ496F6 205 aaPredicted RBP14.45□□□□□ -0.1
COL7A1-207ENST00000467985 ADAMTSL5Q6ZMM2 481 aa14.45□□□□□ -0.1
COL7A1-207ENST00000467985 FKBP11Q9NYL4 201 aa14.45□□□□□ -0.1
COL7A1-207ENST00000467985 TEX50A0A1B0GTY4 177 aa14.44□□□□□ -0.1
COL7A1-207ENST00000467985 A8MWP6 167 aa14.44□□□□□ -0.1
COL7A1-207ENST00000467985 CLEC3BP05452 202 aa14.44□□□□□ -0.1
COL7A1-207ENST00000467985 SERPINE2P07093 398 aa14.44□□□□□ -0.1
COL7A1-207ENST00000467985 UCP3P55916 312 aa14.44□□□□□ -0.1
COL7A1-207ENST00000467985 DEFB114Q30KQ6 69 aa14.44□□□□□ -0.1
COL7A1-207ENST00000467985 ZNF585BQ52M93 769 aa14.44□□□□□ -0.1
COL7A1-207ENST00000467985 MZT2BQ6NZ67 158 aa14.44□□□□□ -0.1
COL7A1-207ENST00000467985 SLC38A6Q8IZM9 456 aa14.44□□□□□ -0.1
COL7A1-207ENST00000467985 TERB2Q8NHR7 220 aa14.44□□□□□ -0.1
COL7A1-207ENST00000467985 NDUFA4L2Q9NRX3 87 aa14.44□□□□□ -0.1
COL7A1-207ENST00000467985 SLC2A8Q9NY64 477 aa14.44□□□□□ -0.1
COL7A1-207ENST00000467985 PRNDQ9UKY0 176 aa14.44□□□□□ -0.1
COL7A1-207ENST00000467985 S4R3C0 116 aa14.44□□□□□ -0.1
COL7A1-207ENST00000467985 MFSD2BA6NFX1 497 aa14.43□□□□□ -0.1
COL7A1-207ENST00000467985 LYRM1O43325 122 aa14.43□□□□□ -0.1
COL7A1-207ENST00000467985 OR13C7P0DN81 318 aa14.43□□□□□ -0.1
COL7A1-207ENST00000467985 G6PCP35575 357 aa14.43□□□□□ -0.1
COL7A1-207ENST00000467985 PHLDA2Q53GA4 152 aa14.43□□□□□ -0.1
COL7A1-207ENST00000467985 OR10W1Q8NGF6 305 aa14.43□□□□□ -0.1
COL7A1-207ENST00000467985 ZNF502Q8TBZ5 544 aa14.43□□□□□ -0.1
COL7A1-207ENST00000467985 VN1R17PQ8TDU5 208 aa14.43□□□□□ -0.1
COL7A1-207ENST00000467985 LSM10Q969L4 123 aaKnown RBP14.43□□□□□ -0.1
COL7A1-207ENST00000467985 ZC4H2Q9NQZ6 224 aa14.43□□□□□ -0.1
COL7A1-207ENST00000467985 C14orf166Q9Y224 244 aaKnown RBP14.43□□□□□ -0.1
COL7A1-207ENST00000467985 OR51B2Q9Y5P1 312 aa14.43□□□□□ -0.1
COL7A1-207ENST00000467985 ZNF320A2RRD8 509 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 CBLN1P23435 193 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 CD81P60033 236 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 WT1-ASQ06250 92 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 TBC1D26Q86UD7 250 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 OR1L6Q8NGR2 347 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 OR5B3Q8NH48 314 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 MUC7Q8TAX7 377 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 ZFAND1Q8TCF1 268 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 MARCH1Q8TCQ1 289 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 TMEM56Q96MV1 263 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 SCGB3A2Q96PL1 93 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 ATP6V0BQ99437 205 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 SPATA25Q9BR10 227 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 HINT2Q9BX68 163 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 PALMDQ9NP74 551 aa14.42□□□□□ -0.1
COL7A1-207ENST00000467985 RYR3Q15413 4870 aa14.41□□□□□ -0.1
COL7A1-207ENST00000467985 ZNF785A8K8V0 405 aa14.41□□□□□ -0.1
COL7A1-207ENST00000467985 GPR183P32249 361 aa14.41□□□□□ -0.1
COL7A1-207ENST00000467985 LHFPL1Q86WI0 220 aa14.41□□□□□ -0.1
COL7A1-207ENST00000467985 MARC2Q969Z3 335 aa14.41□□□□□ -0.1
COL7A1-207ENST00000467985 NEURL2Q9BR09 285 aa14.41□□□□□ -0.1
COL7A1-207ENST00000467985 TMEM14BQ9NUH8 114 aa14.41□□□□□ -0.1
COL7A1-207ENST00000467985 F11RQ9Y624 299 aaKnown RBP14.41□□□□□ -0.1
COL7A1-207ENST00000467985 TMEM213A2RRL7 107 aa14.4□□□□□ -0.1
COL7A1-207ENST00000467985 PLA2G10O15496 165 aa14.4□□□□□ -0.1
COL7A1-207ENST00000467985 CCR6P51684 374 aa14.4□□□□□ -0.1
COL7A1-207ENST00000467985 ASAH1Q13510 395 aa14.4□□□□□ -0.1
COL7A1-207ENST00000467985 RBMS2Q15434 407 aaKnown RBP14.4□□□□□ -0.1
COL7A1-207ENST00000467985 SURF2Q15527 256 aaPredicted RBP14.4□□□□□ -0.1
COL7A1-207ENST00000467985 GUCA2BQ16661 112 aa14.4□□□□□ -0.1
COL7A1-207ENST00000467985 HAGHQ16775 308 aa14.4□□□□□ -0.1
COL7A1-207ENST00000467985 SLC25A24Q6NUK1 477 aa14.4□□□□□ -0.1
COL7A1-207ENST00000467985 PLET1Q6UQ28 207 aa14.4□□□□□ -0.1
COL7A1-207ENST00000467985 OR13C8Q8NGS7 320 aa14.4□□□□□ -0.1
COL7A1-207ENST00000467985 ENKURQ8TC29 256 aa14.4□□□□□ -0.1
COL7A1-207ENST00000467985 ZNF486Q96H40 463 aaPredicted RBP14.4□□□□□ -0.1
COL7A1-207ENST00000467985 CITED4Q96RK1 184 aa14.4□□□□□ -0.1
COL7A1-207ENST00000467985 NSG2Q9Y328 171 aa14.4□□□□□ -0.1
COL7A1-207ENST00000467985 FAM240BA0A1B0GVZ2 78 aa14.39□□□□□ -0.11
COL7A1-207ENST00000467985 C15orf61A6NNL5 157 aa14.39□□□□□ -0.11
COL7A1-207ENST00000467985 ELLP55199 621 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-207ENST00000467985 CCDC71LQ8N9Z2 235 aa14.39□□□□□ -0.11
COL7A1-207ENST00000467985 SLC25A21Q9BQT8 299 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-207ENST00000467985 COPZ2Q9P299 210 aa14.39□□□□□ -0.11
COL7A1-207ENST00000467985 TBC1D24Q9ULP9 559 aa14.39□□□□□ -0.11
COL7A1-207ENST00000467985 UFC1Q9Y3C8 167 aa14.39□□□□□ -0.11
COL7A1-207ENST00000467985 TGOLN2O43493 480 aa14.38□□□□□ -0.11
COL7A1-207ENST00000467985 PI3P19957 117 aa14.38□□□□□ -0.11
COL7A1-207ENST00000467985 IFITM3Q01628 133 aa14.38□□□□□ -0.11
COL7A1-207ENST00000467985 SPSB3Q6PJ21 355 aa14.38□□□□□ -0.11
COL7A1-207ENST00000467985 SLC16A13Q7RTY0 426 aa14.38□□□□□ -0.11
COL7A1-207ENST00000467985 H2BFWTQ7Z2G1 175 aa14.38□□□□□ -0.11
COL7A1-207ENST00000467985 UXS1Q8NBZ7 420 aa14.38□□□□□ -0.11
COL7A1-207ENST00000467985 OR4A16Q8NH70 328 aa14.38□□□□□ -0.11
COL7A1-207ENST00000467985 CACNG8Q8WXS5 425 aa14.38□□□□□ -0.11
COL7A1-207ENST00000467985 BSCL2Q96G97 398 aaPredicted RBP14.38□□□□□ -0.11
COL7A1-207ENST00000467985 SEC22AQ96IW7 307 aa14.38□□□□□ -0.11
COL7A1-207ENST00000467985 PLEKHA3Q9HB20 300 aa14.38□□□□□ -0.11
COL7A1-207ENST00000467985 TENM2Q9NT68 2774 aa14.38□□□□□ -0.11
COL7A1-207ENST00000467985 CTSDP07339 412 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms