RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 RPL35AP18077 110 aaKnown RBP15.62■□□□□ 0.09
COL9A3-207ENST00000467819 ADMP35318 185 aa15.62■□□□□ 0.09
COL9A3-207ENST00000467819 TAS2R46P59540 309 aa15.62■□□□□ 0.09
COL9A3-207ENST00000467819 CROCCP3Q8IVE0 287 aa15.62■□□□□ 0.09
COL9A3-207ENST00000467819 OR4C46A6NHA9 309 aa15.61■□□□□ 0.09
COL9A3-207ENST00000467819 DBX1A6NMT0 343 aa15.61■□□□□ 0.09
COL9A3-207ENST00000467819 CTSDP07339 412 aaPredicted RBP15.61■□□□□ 0.09
COL9A3-207ENST00000467819 LSM3P62310 102 aaKnown RBP15.61■□□□□ 0.09
COL9A3-207ENST00000467819 TNFRSF9Q07011 255 aa15.61■□□□□ 0.09
COL9A3-207ENST00000467819 PHLDA2Q53GA4 152 aa15.61■□□□□ 0.09
COL9A3-207ENST00000467819 OR6F1Q8NGZ6 308 aa15.61■□□□□ 0.09
COL9A3-207ENST00000467819 TMEM56Q96MV1 263 aa15.61■□□□□ 0.09
COL9A3-207ENST00000467819 ATP6V0BQ99437 205 aa15.61■□□□□ 0.09
COL9A3-207ENST00000467819 PRNDQ9UKY0 176 aa15.61■□□□□ 0.09
COL9A3-207ENST00000467819 NUPR2A6NF83 97 aa15.6■□□□□ 0.09
COL9A3-207ENST00000467819 UBE2CO00762 179 aa15.6■□□□□ 0.09
COL9A3-207ENST00000467819 NAT1P18440 290 aa15.6■□□□□ 0.09
COL9A3-207ENST00000467819 HLA-DMAP28067 261 aa15.6■□□□□ 0.09
COL9A3-207ENST00000467819 PRSS3P35030 304 aa15.6■□□□□ 0.09
COL9A3-207ENST00000467819 HRH1P35367 487 aa15.6■□□□□ 0.09
COL9A3-207ENST00000467819 RPS19P39019 145 aaKnown RBP15.6■□□□□ 0.09
COL9A3-207ENST00000467819 KCTD21Q4G0X4 260 aa15.6■□□□□ 0.09
COL9A3-207ENST00000467819 STPG3Q8N7X2 389 aa15.6■□□□□ 0.09
COL9A3-207ENST00000467819 OR5B3Q8NH48 314 aa15.6■□□□□ 0.09
COL9A3-207ENST00000467819 KIR2DL5BA0A0G2JN68 375 aa15.59■□□□□ 0.09
COL9A3-207ENST00000467819 KIR2DL5BA0A0G2JPC4 375 aa15.59■□□□□ 0.09
COL9A3-207ENST00000467819 C15orf61A6NNL5 157 aa15.59■□□□□ 0.09
COL9A3-207ENST00000467819 K7EMT4 169 aa15.59■□□□□ 0.09
COL9A3-207ENST00000467819 KIR2DL5AQ8N109 375 aa15.59■□□□□ 0.09
COL9A3-207ENST00000467819 CADM3Q8N126 398 aa15.59■□□□□ 0.09
COL9A3-207ENST00000467819 KIR2DL5BQ8NHK3 375 aa15.59■□□□□ 0.09
COL9A3-207ENST00000467819 RNF183Q96D59 192 aa15.59■□□□□ 0.09
COL9A3-207ENST00000467819 MISP3Q96FF7 219 aa15.59■□□□□ 0.09
COL9A3-207ENST00000467819 TMEM14BQ9NUH8 114 aa15.59■□□□□ 0.09
COL9A3-207ENST00000467819 FKBP11Q9NYL4 201 aa15.59■□□□□ 0.09
COL9A3-207ENST00000467819 C15orf62A8K5M9 175 aa15.58■□□□□ 0.08
COL9A3-207ENST00000467819 CTSGP08311 255 aa15.58■□□□□ 0.08
COL9A3-207ENST00000467819 APRG1Q8IVJ8 170 aa15.58■□□□□ 0.08
COL9A3-207ENST00000467819 OR1P1Q8NH06 330 aa15.58■□□□□ 0.08
COL9A3-207ENST00000467819 GALNT14Q96FL9 552 aa15.58■□□□□ 0.08
COL9A3-207ENST00000467819 RNF2Q99496 336 aa15.58■□□□□ 0.08
COL9A3-207ENST00000467819 TSC22D3Q99576 134 aa15.58■□□□□ 0.08
COL9A3-207ENST00000467819 SMPXQ9UHP9 88 aa15.58■□□□□ 0.08
COL9A3-207ENST00000467819 IGHV3-49A0A0A0MS15 119 aa15.57■□□□□ 0.08
COL9A3-207ENST00000467819 NUPL2O15504 423 aaKnown RBP15.57■□□□□ 0.08
COL9A3-207ENST00000467819 YIF1AO95070 293 aa15.57■□□□□ 0.08
COL9A3-207ENST00000467819 TFPI2P48307 235 aa15.57■□□□□ 0.08
COL9A3-207ENST00000467819 TSPAN5P62079 268 aa15.57■□□□□ 0.08
COL9A3-207ENST00000467819 CEMP1Q6PRD7 247 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-207ENST00000467819 LYSMD2Q8IV50 215 aa15.57■□□□□ 0.08
COL9A3-207ENST00000467819 SLC25A46Q96AG3 418 aa15.57■□□□□ 0.08
COL9A3-207ENST00000467819 ZNF414Q96IQ9 312 aa15.57■□□□□ 0.08
COL9A3-207ENST00000467819 FRAS1Q86XX4 4008 aa15.57■□□□□ 0.08
COL9A3-207ENST00000467819 IGKV3-7A0A075B6H7 116 aa15.56■□□□□ 0.08
COL9A3-207ENST00000467819 IGHV7-4-1A0A0J9YVY3 117 aa15.56■□□□□ 0.08
COL9A3-207ENST00000467819 EIF4EP06730 217 aaKnown RBP15.56■□□□□ 0.08
COL9A3-207ENST00000467819 S100GP29377 79 aa15.56■□□□□ 0.08
COL9A3-207ENST00000467819 FCGR2BP31994 310 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-207ENST00000467819 RELQ04864 619 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-207ENST00000467819 ZNF124Q15973 351 aa15.56■□□□□ 0.08
COL9A3-207ENST00000467819 TBC1D26Q86UD7 250 aa15.56■□□□□ 0.08
COL9A3-207ENST00000467819 YIPF6Q96EC8 236 aa15.56■□□□□ 0.08
COL9A3-207ENST00000467819 RHPN1-AS1Q9BWJ2 59 aa15.56■□□□□ 0.08
COL9A3-207ENST00000467819 MAP6D1Q9H9H5 199 aa15.56■□□□□ 0.08
COL9A3-207ENST00000467819 CHEK1O14757 476 aa15.55■□□□□ 0.08
COL9A3-207ENST00000467819 IGHV3-48P01763 117 aa15.55■□□□□ 0.08
COL9A3-207ENST00000467819 MFAP4P55083 255 aa15.55■□□□□ 0.08
COL9A3-207ENST00000467819 H2BFWTQ7Z2G1 175 aa15.55■□□□□ 0.08
COL9A3-207ENST00000467819 TMEM116Q8NCL8 245 aa15.55■□□□□ 0.08
COL9A3-207ENST00000467819 OR4A16Q8NH70 328 aa15.55■□□□□ 0.08
COL9A3-207ENST00000467819 SEC22AQ96IW7 307 aa15.55■□□□□ 0.08
COL9A3-207ENST00000467819 KMT2AQ03164 3969 aa15.54■□□□□ 0.08
COL9A3-207ENST00000467819 I3L2K1 104 aa15.54■□□□□ 0.08
COL9A3-207ENST00000467819 IGKV1-39P01597 117 aa15.54■□□□□ 0.08
COL9A3-207ENST00000467819 IGKV1D-39P04432 117 aa15.54■□□□□ 0.08
COL9A3-207ENST00000467819 LPCAT3Q6P1A2 487 aa15.54■□□□□ 0.08
COL9A3-207ENST00000467819 SNX29P2Q8IUI4 249 aa15.54■□□□□ 0.08
COL9A3-207ENST00000467819 GPX8Q8TED1 209 aa15.54■□□□□ 0.08
COL9A3-207ENST00000467819 MRGPRFQ96AM1 343 aa15.54■□□□□ 0.08
COL9A3-207ENST00000467819 PINX1Q96BK5 328 aaKnown RBP15.54■□□□□ 0.08
COL9A3-207ENST00000467819 C6orf62Q9GZU0 229 aaPredicted RBP15.54■□□□□ 0.08
COL9A3-207ENST00000467819 COMMD3Q9UBI1 195 aa15.54■□□□□ 0.08
COL9A3-207ENST00000467819 KLK5Q9Y337 293 aaPredicted RBP15.54■□□□□ 0.08
COL9A3-207ENST00000467819 IGHV3OR16-13A0A075B7E8 117 aa15.53■□□□□ 0.08
COL9A3-207ENST00000467819 IGHV3-74A0A0B4J1X5 117 aa15.53■□□□□ 0.08
COL9A3-207ENST00000467819 MT-CO2P00403 227 aa15.53■□□□□ 0.08
COL9A3-207ENST00000467819 PRCDQ00LT1 54 aa15.53■□□□□ 0.08
COL9A3-207ENST00000467819 GBGT1Q8N5D6 347 aa15.53■□□□□ 0.08
COL9A3-207ENST00000467819 TMEM217Q8N7C4 229 aa15.53■□□□□ 0.08
COL9A3-207ENST00000467819 OR10C1Q96KK4 312 aa15.53■□□□□ 0.08
COL9A3-207ENST00000467819 NXF2Q9GZY0 626 aaKnown RBP15.53■□□□□ 0.08
COL9A3-207ENST00000467819 FAM212BQ9NTI7 297 aaPredicted RBP15.53■□□□□ 0.08
COL9A3-207ENST00000467819 GNG7O60262 68 aa15.52■□□□□ 0.08
COL9A3-207ENST00000467819 ATF4P18848 351 aaPredicted RBP15.52■□□□□ 0.08
COL9A3-207ENST00000467819 SPINK9Q5DT21 86 aa15.52■□□□□ 0.08
COL9A3-207ENST00000467819 CMTM3Q96MX0 182 aa15.52■□□□□ 0.08
COL9A3-207ENST00000467819 TXN2Q99757 166 aa15.52■□□□□ 0.08
COL9A3-207ENST00000467819 VCX3AQ9NNX9 186 aa15.52■□□□□ 0.08
COL9A3-207ENST00000467819 TRAV14DV4A0A0A6YYC5 116 aa15.51■□□□□ 0.07
COL9A3-207ENST00000467819 SMIM31A0A1B0GVY4 71 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms