RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 SOX21Q9Y651 276 aaPredicted RBP5.54□□□□□ -1.52
SCAF4-204ENST00000467731 TNCP24821 2201 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 IGHV1-3A0A0C4DH29 117 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 CRYM-AS1A6NIL9 109 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 MPPED1O15442 326 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 VSIG10L2P0DP72 767 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 S100GP29377 79 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 CEACAM3P40198 252 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 RND3P61587 244 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 SUPT4H1P63272 117 aaKnown RBP5.53□□□□□ -1.52
SCAF4-204ENST00000467731 PPP1R1AQ13522 171 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 COL5A1-AS1Q5SY13 56 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 EIF5AL1Q6IS14 154 aaKnown RBP5.53□□□□□ -1.52
SCAF4-204ENST00000467731 ZNF66Q6ZN08 573 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 CCDC71LQ8N9Z2 235 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 ORAOV1Q8WV07 137 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 HSD17B10Q99714 261 aaKnown RBP5.53□□□□□ -1.52
SCAF4-204ENST00000467731 TMED3Q9Y3Q3 217 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 PLXNB1O43157 2135 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 FN1P02751 2386 aaKnown RBP5.53□□□□□ -1.52
SCAF4-204ENST00000467731 A0A1W2PPI3 338 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 HLA-AP01891 365 aaKnown RBP5.53□□□□□ -1.52
SCAF4-204ENST00000467731 GAPDHP04406 335 aaKnown RBP5.53□□□□□ -1.52
SCAF4-204ENST00000467731 HKR1P10072 659 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 GZMBP10144 247 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 F2RP25116 425 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 ZNF816Q0VGE8 651 aaPredicted RBP5.53□□□□□ -1.52
SCAF4-204ENST00000467731 Q71RC1 249 aaPredicted RBP5.53□□□□□ -1.52
SCAF4-204ENST00000467731 SGPP2Q8IWX5 399 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 OR52B4Q8NGK2 314 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 OR5M8Q8NGP6 311 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 RNASEH2CQ8TDP1 164 aaKnown RBP5.53□□□□□ -1.52
SCAF4-204ENST00000467731 TP53RKQ96S44 253 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 NABP2Q9BQ15 211 aa5.53□□□□□ -1.52
SCAF4-204ENST00000467731 IGHV3-72A0A0B4J1Y9 119 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 C3orf85A0A1B0GTC6 90 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 RAMP3O60896 148 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 OR5AC1P0C628 307 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 FABP4P15090 132 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 BRWD1-AS2P59051 145 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 TAS2R31P59538 309 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 CATR1Q13166 79 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 DHRS2Q13268 280 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 UBE2V1Q13404 147 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 C5orf64Q2M2E5 130 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 SP6Q3SY56 376 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 BCL6BQ8N143 479 aaPredicted RBP5.52□□□□□ -1.53
SCAF4-204ENST00000467731 DDB2Q92466 427 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 NAA60Q9H7X0 242 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 RPS10P5Q9NQ39 176 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 LIN7CQ9NUP9 197 aaKnown RBP5.52□□□□□ -1.53
SCAF4-204ENST00000467731 PRR13Q9NZ81 148 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 MGAT4CQ9UBM8 478 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 H0YJW9 148 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 TIMM23O14925 209 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 GCGP01275 180 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 IGKV1-16P04430 117 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 STAG3L2P0CL84 134 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 THBS3P49746 956 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 CCDC144NLQ6NUI1 221 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 MOB3BQ86TA1 216 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 OR5AN1Q8NGI8 311 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 GALNT14Q96FL9 552 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 FAM96BQ9Y3D0 163 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 MDFIC2A0A1B0GVS7 189 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 RNF212BA8MTL3 300 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 F6UZH7 168 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 FCGR3BO75015 233 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 CD24P25063 80 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 UBE2MP61081 183 aaKnown RBP5.52□□□□□ -1.53
SCAF4-204ENST00000467731 GGNBP1Q5YKI7 109 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 IL34Q6ZMJ4 242 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 LYG2Q86SG7 212 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 LINC01551Q86U37 167 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 OR10W1Q8NGF6 305 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 CASTOR1Q8WTX7 329 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 CFHR4Q92496 578 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 SAT2Q96F10 170 aaPredicted RBP5.52□□□□□ -1.53
SCAF4-204ENST00000467731 ADTRPQ96IZ2 230 aa5.52□□□□□ -1.53
SCAF4-204ENST00000467731 PGPEP1LA6NFU8 196 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 OOSP1A8MZH6 123 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 H0Y980 276 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 MBPP02686 304 aaPredicted RBP5.51□□□□□ -1.53
SCAF4-204ENST00000467731 SRP14P37108 136 aaKnown RBP5.51□□□□□ -1.53
SCAF4-204ENST00000467731 DLK1P80370 383 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 FBLN7Q53RD9 439 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 FAM24BQ8N5W8 94 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 TEX29Q8N6K0 151 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 TMEM222Q9H0R3 208 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 TMEM160Q9NX00 188 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 FXYD6-FXYD2A0A087WZ82 144 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 A0A0D9SG52 128 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 DFFBO76075 338 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 SFT2D2O95562 160 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 APOA2P02652 100 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 IL5P05113 134 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 TMEM187Q14656 261 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 RTL8BQ17RB0 113 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 DEFB112Q30KQ8 113 aa5.51□□□□□ -1.53
SCAF4-204ENST00000467731 BSXQ3C1V8 233 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms