RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 STX19Q8N4C7 294 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 GBGT1Q8N5D6 347 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 LINC00311Q8N616 119 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 HSD17B11Q8NBQ5 300 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 OR2T33Q8NG76 320 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 OR9Q2Q8NGE9 314 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 PLPPR1Q8TBJ4 325 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 RTN4IP1Q8WWV3 396 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-207ENST00000467273 TLCD1Q96CP7 247 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 CENPNQ96H22 339 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-207ENST00000467273 Q96MT0 163 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 NEURL2Q9BR09 285 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 OVOL2Q9BRP0 275 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 C2orf88Q9BSF0 95 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 BTBD10Q9BSF8 475 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 MROQ9BYG7 248 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 PBOV1Q9GZY1 135 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 COMMD4Q9H0A8 199 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 OR51M1Q9H341 326 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 EXOSC4Q9NPD3 245 aaKnown RBP4.05□□□□□ -1.76
PTCD3-207ENST00000467273 CMC2Q9NRP2 79 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-207ENST00000467273 IMPAD1Q9NX62 359 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 CALYQ9NYX4 217 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 IDI2-AS1Q9NZ38 188 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 SAMD4AQ9UPU9 718 aaKnown RBP4.05□□□□□ -1.76
PTCD3-207ENST00000467273 HERC1Q15751 4861 aa4.05□□□□□ -1.76
PTCD3-207ENST00000467273 DMBT1Q9UGM3 2413 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-207ENST00000467273 IGLV5-37A0A075B6J1 123 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 E5RGE8 158 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 F5H768 121 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 G3V318 75 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 OR2H2O95918 312 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 TTRP02766 147 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 ISG15P05161 165 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 HTR1FP30939 366 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 GPX4P36969 197 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-207ENST00000467273 RBP2P50120 134 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 NUDT2P50583 147 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 AP2S1P53680 142 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-207ENST00000467273 TMEM267Q0VDI3 215 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-207ENST00000467273 PNRC1Q12796 327 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-207ENST00000467273 PLA2G7Q13093 441 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 SOHLH1Q5JUK2 328 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 DMKNQ6E0U4 476 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-207ENST00000467273 FAM53AQ6NSI3 398 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-207ENST00000467273 CD200R1LQ6Q8B3 271 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 IL34Q6ZMJ4 242 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 SLC25A26Q70HW3 274 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 OR51T1Q8NGJ9 327 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 PHLDA1Q8WV24 401 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-207ENST00000467273 ASB17Q8WXJ9 295 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 UHRF2Q96PU4 802 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 SPACA5Q96QH8 159 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 ACTR3CQ9C0K3 210 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-207ENST00000467273 PLEKHA3Q9HB20 300 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 HMG20AQ9NP66 347 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 PARP11Q9NR21 331 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 CLN6Q9NWW5 311 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 SDHAF2Q9NX18 166 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 MLXQ9UH92 298 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 NSG2Q9Y328 171 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 TMED3Q9Y3Q3 217 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 ETV7Q9Y603 341 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 TMEM14AQ9Y6G1 99 aa4.04□□□□□ -1.76
PTCD3-207ENST00000467273 IGKV1-27A0A075B6S5 117 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 IGHV7-81A0A0B4J1V7 117 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 IGHV3-72A0A0B4J1Y9 119 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 A0A0G2JLM5 398 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 KIR2DL5BA0A0G2JN68 375 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 KIR2DL5BA0A0G2JPC4 375 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 A0A0J9YWU9 116 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 OR11H12B2RN74 326 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 LOC110117498-PIK3R3F6TDL0 507 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 TSTD3H0UI37 97 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 PRKYO43930 277 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 SOX15O60248 233 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 OR2A4O95047 310 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 HLA-AP01891 365 aaKnown RBP4.03□□□□□ -1.76
PTCD3-207ENST00000467273 C8orf88P0DMB2 117 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 COX4I1P13073 169 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 CELP19835 753 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 GZMHP20718 246 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 CCL1P22362 96 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 DUTP33316 252 aaKnown RBP4.03□□□□□ -1.76
PTCD3-207ENST00000467273 MEOX2P50222 304 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 MMDQ15546 238 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 ATP6V1FQ16864 119 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 TMEM30BQ3MIR4 351 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 SLC35D3Q5M8T2 416 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 ZNF660Q6AZW8 331 aaPredicted RBP4.03□□□□□ -1.76
PTCD3-207ENST00000467273 KIR2DL5AQ8N109 375 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 GVQW1Q8N7I0 195 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 ADAD2Q8NCV1 583 aaKnown RBP4.03□□□□□ -1.76
PTCD3-207ENST00000467273 OR8D4Q8NGM9 314 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 KIR2DL5BQ8NHK3 375 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 PP6455Q8WZ26 134 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 BORCS8Q96FH0 119 aa4.03□□□□□ -1.76
PTCD3-207ENST00000467273 MRPL48Q96GC5 212 aaKnown RBP4.03□□□□□ -1.76
PTCD3-207ENST00000467273 SFRP2Q96HF1 295 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms