RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 RASL11BQ9BPW5 248 aa10.28□□□□□ -0.76
COL4A1-202ENST00000467182 SRSF8Q9BRL6 282 aaKnown RBP10.28□□□□□ -0.76
COL4A1-202ENST00000467182 ZNF471Q9BX82 626 aaPredicted RBP10.28□□□□□ -0.76
COL4A1-202ENST00000467182 TMEM160Q9NX00 188 aa10.28□□□□□ -0.76
COL4A1-202ENST00000467182 CSPG4Q6UVK1 2322 aa10.28□□□□□ -0.76
COL4A1-202ENST00000467182 RGS13O14921 159 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 LY6G6DO95868 133 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 REG1AP05451 166 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 OR8U8P0C7N1 319 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 OR13C7P0DN81 318 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 MFAP2P55001 183 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 ATP5IP56385 69 aaPredicted RBP10.27□□□□□ -0.77
COL4A1-202ENST00000467182 UBA52P62987 128 aaKnown RBP10.27□□□□□ -0.77
COL4A1-202ENST00000467182 RPP30P78346 268 aaKnown RBP10.27□□□□□ -0.77
COL4A1-202ENST00000467182 ERHP84090 104 aaKnown RBP10.27□□□□□ -0.77
COL4A1-202ENST00000467182 SLC38A11Q08AI6 406 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 CLINT1Q14677 625 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 VWC2Q2TAL6 325 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 OR8G2PQ6IF36 304 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 TEX261Q6UWH6 196 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 C19orf35Q6ZS72 473 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 C16orf82Q7Z2V1 217 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 SSMEM1Q8WWF3 244 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 ARPC1AQ92747 370 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 ATP5SQ99766 215 aa10.27□□□□□ -0.77
COL4A1-202ENST00000467182 FAM103A1Q9BTL3 118 aaKnown RBP10.27□□□□□ -0.77
COL4A1-202ENST00000467182 LINC01548A6NM66 108 aa10.26□□□□□ -0.77
COL4A1-202ENST00000467182 CNIH1O95406 144 aa10.26□□□□□ -0.77
COL4A1-202ENST00000467182 APELAP0DMC3 54 aa10.26□□□□□ -0.77
COL4A1-202ENST00000467182 CTRB1P17538 263 aa10.26□□□□□ -0.77
COL4A1-202ENST00000467182 MDKP21741 143 aaPredicted RBP10.26□□□□□ -0.77
COL4A1-202ENST00000467182 CTRB2Q6GPI1 263 aa10.26□□□□□ -0.77
COL4A1-202ENST00000467182 ETV3LQ6ZN32 361 aa10.26□□□□□ -0.77
COL4A1-202ENST00000467182 HSD17B13Q7Z5P4 300 aaPredicted RBP10.26□□□□□ -0.77
COL4A1-202ENST00000467182 UBAC2Q8NBM4 344 aa10.26□□□□□ -0.77
COL4A1-202ENST00000467182 OR5R1Q8NH85 324 aa10.26□□□□□ -0.77
COL4A1-202ENST00000467182 PITPNC1Q9UKF7 332 aa10.26□□□□□ -0.77
COL4A1-202ENST00000467182 PAIP2BQ9ULR5 123 aaKnown RBP10.26□□□□□ -0.77
COL4A1-202ENST00000467182 DMRT1Q9Y5R6 373 aa10.26□□□□□ -0.77
COL4A1-202ENST00000467182 NAV3Q8IVL0 2385 aa10.26□□□□□ -0.77
COL4A1-202ENST00000467182 CYSRT1A8MQ03 144 aa10.25□□□□□ -0.77
COL4A1-202ENST00000467182 FBXO24O75426 580 aa10.25□□□□□ -0.77
COL4A1-202ENST00000467182 JTBO76095 146 aa10.25□□□□□ -0.77
COL4A1-202ENST00000467182 SCAF4O95104 1147 aaKnown RBP10.25□□□□□ -0.77
COL4A1-202ENST00000467182 CRYGCP07315 174 aa10.25□□□□□ -0.77
COL4A1-202ENST00000467182 TPT1P13693 172 aaKnown RBP10.25□□□□□ -0.77
COL4A1-202ENST00000467182 RAB11AP62491 216 aa10.25□□□□□ -0.77
COL4A1-202ENST00000467182 HBG1P69891 147 aa10.25□□□□□ -0.77
COL4A1-202ENST00000467182 HBG2P69892 147 aa10.25□□□□□ -0.77
COL4A1-202ENST00000467182 EXOSC2Q13868 293 aaKnown RBP10.25□□□□□ -0.77
COL4A1-202ENST00000467182 ATP6V1FQ16864 119 aa10.25□□□□□ -0.77
COL4A1-202ENST00000467182 BAP18Q8IXM2 172 aa10.25□□□□□ -0.77
COL4A1-202ENST00000467182 SIGLECL1Q8N7X8 197 aa10.25□□□□□ -0.77
COL4A1-202ENST00000467182 ZNF680Q8NEM1 530 aa10.25□□□□□ -0.77
COL4A1-202ENST00000467182 OR10P1Q8NGE3 313 aa10.25□□□□□ -0.77
COL4A1-202ENST00000467182 GINS3Q9BRX5 216 aa10.25□□□□□ -0.77
COL4A1-202ENST00000467182 PARD6GQ9BYG4 376 aaPredicted RBP10.25□□□□□ -0.77
COL4A1-202ENST00000467182 PLA2G2EQ9NZK7 142 aa10.25□□□□□ -0.77
COL4A1-202ENST00000467182 F11RQ9Y624 299 aaKnown RBP10.25□□□□□ -0.77
COL4A1-202ENST00000467182 ATP6V0E1O15342 81 aa10.24□□□□□ -0.77
COL4A1-202ENST00000467182 HOXA3O43365 443 aaPredicted RBP10.24□□□□□ -0.77
COL4A1-202ENST00000467182 DFFBO76075 338 aa10.24□□□□□ -0.77
COL4A1-202ENST00000467182 SNCAP37840 140 aa10.24□□□□□ -0.77
COL4A1-202ENST00000467182 CRIP2P52943 208 aaPredicted RBP10.24□□□□□ -0.77
COL4A1-202ENST00000467182 DLK1P80370 383 aa10.24□□□□□ -0.77
COL4A1-202ENST00000467182 C19orf54Q5BKX5 351 aa10.24□□□□□ -0.77
COL4A1-202ENST00000467182 ARSJQ5FYB0 599 aaPredicted RBP10.24□□□□□ -0.77
COL4A1-202ENST00000467182 Q6ZS46 218 aa10.24□□□□□ -0.77
COL4A1-202ENST00000467182 LILRB2Q8N423 598 aa10.24□□□□□ -0.77
COL4A1-202ENST00000467182 TTC9CQ8N5M4 171 aa10.24□□□□□ -0.77
COL4A1-202ENST00000467182 OR1P1Q8NH06 330 aa10.24□□□□□ -0.77
COL4A1-202ENST00000467182 SGMS2Q8NHU3 365 aa10.24□□□□□ -0.77
COL4A1-202ENST00000467182 ABHD5Q8WTS1 349 aa10.24□□□□□ -0.77
COL4A1-202ENST00000467182 PINX1Q96BK5 328 aaKnown RBP10.24□□□□□ -0.77
COL4A1-202ENST00000467182 TMEM147Q9BVK8 224 aa10.24□□□□□ -0.77
COL4A1-202ENST00000467182 VPREB3Q9UKI3 123 aa10.24□□□□□ -0.77
COL4A1-202ENST00000467182 ACANP16112 2415 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 BORCS7-ASMTA0A0B4J1R7 106 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 NPIPB5A8MRT5 1133 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 M0QZK8 103 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 IGHG2P01859 326 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 IFNA4P05014 189 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 CD99P14209 185 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 FOSL1P15407 271 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 SRP14P37108 136 aaKnown RBP10.23□□□□□ -0.77
COL4A1-202ENST00000467182 BLCAPP62952 87 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 ZNF266Q14584 549 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 MLANAQ16655 118 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 KLK9Q2XQG4 91 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 MRPL41Q8IXM3 137 aaKnown RBP10.23□□□□□ -0.77
COL4A1-202ENST00000467182 PHYHIPLQ96FC7 376 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 GGACTQ9BVM4 153 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 FNDC4Q9H6D8 234 aaPredicted RBP10.23□□□□□ -0.77
COL4A1-202ENST00000467182 PARP11Q9NR21 331 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 KLK9Q9UKQ9 250 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 RFNGQ9Y644 331 aa10.23□□□□□ -0.77
COL4A1-202ENST00000467182 BAHCC1Q9P281 2608 aa10.22□□□□□ -0.77
COL4A1-202ENST00000467182 UBE2L5PA0A1B0GUS4 154 aa10.22□□□□□ -0.77
COL4A1-202ENST00000467182 FNDC10F2Z333 226 aa10.22□□□□□ -0.77
COL4A1-202ENST00000467182 SPP1P10451 314 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms