RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 NACADO15069 1562 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 PLXNB1O43157 2135 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 ATG2BQ96BY7 2078 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 ZNF532Q9HCE3 1301 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 WDR90Q96KV7 1748 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 IRGMA1A4Y4 181 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 FNDC10F2Z333 226 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 PGRMC1O00264 195 aaKnown RBP0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 ATG12O94817 140 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 S1PR2O95136 353 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 ZNF682O95780 498 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 C1QAP02745 245 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 C8GP07360 202 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 SULT1A3P0DMM9 295 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 SULT1A4P0DMN0 295 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 SMIM10L2AP0DMW4 78 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 SMIM10L2BP0DMW5 78 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 MSNP26038 577 aaKnown RBP0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 PSMB8P28062 276 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 RPL28P46779 137 aaKnown RBP0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 TPI1P60174 286 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 RAB14P61106 215 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 HIST1H4AP62805 103 aaKnown RBP0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 ARHGAP11BQ3KRB8 267 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 PABPC1L2AQ5JQF8 200 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 IBA57Q5T440 356 aaKnown RBP0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 LYZL1Q6UWQ5 148 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 SLC35E3Q7Z769 313 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 SMIM20Q8N5G0 67 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 RPP25LQ8N5L8 163 aaKnown RBP0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 OR11H6Q8NGC7 330 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 OR4X2Q8NGF9 303 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 OR51T1Q8NGJ9 327 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 OR13C4Q8NGS5 318 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 GNPDA2Q8TDQ7 276 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 H1FXQ92522 213 aaKnown RBP0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 TOMM6Q96B49 74 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 DERL1Q9BUN8 251 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 OR8D2Q9GZM6 311 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 C20orf27Q9GZN8 174 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 TRABDQ9H4I3 376 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 SS18L2Q9UHA2 77 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 HHLA3Q9XRX5 114 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 CYSLTR1Q9Y271 337 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 UTP11Q9Y3A2 253 aaKnown RBP0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 TIMM22Q9Y584 194 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 SIPA1L1O43166 1804 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 COL11A1P12107 1806 aaPredicted RBP0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 RTL1A6NKG5 1358 aa0.93□□□□□ -2.26
GTF3C3-209ENST00000466862 DENND4BO75064 1496 aaPredicted RBP0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 SORL1Q92673 2214 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 MIA2Q96PC5 1412 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 PBRM1Q86U86 1689 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 IGHV3-64A0A075B6Q5 118 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 TRAV7A0A075B6U4 112 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 TRAV38-1A0A0B4J264 116 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 TRAV41A0A0B4J266 112 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 MUC21A0A0G2JKD1 596 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 MUC21A0A140T8X8 626 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 TRAPPC13A5PLN9 417 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 RFPL4AA6NLU0 287 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 CLDN25C9JDP6 229 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 RFPL4AL1F8VTS6 287 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 H7C2G1 150 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 SLC22A1O15245 554 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 IFNA10P01566 189 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 IGHV3-7P01780 117 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 LGALS1P09382 135 aaKnown RBP0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 OR4E1P0C645 316 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 SMIM17P0DL12 118 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 DEFA4P12838 97 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 RPS4Y1P22090 263 aaKnown RBP0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 PPIBP23284 216 aaKnown RBP0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 ERP29P30040 261 aaKnown RBP0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 EVX1P49640 407 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 HINT1P49773 126 aaPredicted RBP0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 CRYBA4P53673 196 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 EMP1P54849 157 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 TAS2R41P59536 307 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 HSPE1P61604 102 aaKnown RBP0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 DR1Q01658 176 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 TNFRSF9Q07011 255 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 POU6F1Q14863 301 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 KISS1Q15726 138 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 MOGQ16653 247 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 TRIQKQ629K1 86 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 GOLT1AQ6ZVE7 132 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 BPIFA4PQ86YQ2 179 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 C12orf45Q8N5I9 185 aaPredicted RBP0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 SLC25A40Q8TBP6 338 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 FAM172AQ8WUF8 416 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 SLC7A6Q92536 515 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 Q9BRP9 147 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 PARVBQ9HBI1 364 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 MRPL40Q9NQ50 206 aaKnown RBP0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 MED29Q9NX70 200 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 TVP23BQ9NYZ1 205 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 V9GYQ6 96 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 RALGAPA2Q2PPJ7 1873 aa0.92□□□□□ -2.26
GTF3C3-209ENST00000466862 NEO1Q92859 1461 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms