RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 HIST1H2BHQ93079 126 aa4.47□□□□□ -1.69
LRCH3-212ENST00000466845 SLC25A44Q96H78 314 aaPredicted RBP4.47□□□□□ -1.69
LRCH3-212ENST00000466845 C4orf45Q96LM5 186 aa4.47□□□□□ -1.69
LRCH3-212ENST00000466845 HIST1H2BNQ99877 126 aa4.47□□□□□ -1.69
LRCH3-212ENST00000466845 HIST1H2BMQ99879 126 aa4.47□□□□□ -1.69
LRCH3-212ENST00000466845 SLIRPQ9GZT3 109 aaKnown RBP4.47□□□□□ -1.69
LRCH3-212ENST00000466845 TMEM191AQ9H0A3 160 aa4.47□□□□□ -1.69
LRCH3-212ENST00000466845 BANF2Q9H503 90 aa4.47□□□□□ -1.69
LRCH3-212ENST00000466845 POMKQ9H5K3 350 aa4.47□□□□□ -1.69
LRCH3-212ENST00000466845 MAP6D1Q9H9H5 199 aa4.47□□□□□ -1.69
LRCH3-212ENST00000466845 PNRC2Q9NPJ4 139 aaKnown RBP4.47□□□□□ -1.69
LRCH3-212ENST00000466845 RBM12B-AS1Q9P1G2 102 aa4.47□□□□□ -1.69
LRCH3-212ENST00000466845 MTFP1Q9UDX5 166 aa4.47□□□□□ -1.69
LRCH3-212ENST00000466845 FUT9Q9Y231 359 aa4.47□□□□□ -1.69
LRCH3-212ENST00000466845 PAM16Q9Y3D7 125 aa4.47□□□□□ -1.69
LRCH3-212ENST00000466845 GBF1Q92538 1859 aa4.47□□□□□ -1.69
LRCH3-212ENST00000466845 VWA8A3KMH1 1905 aa4.46□□□□□ -1.69
LRCH3-212ENST00000466845 SCN5AQ14524 2016 aa4.46□□□□□ -1.69
LRCH3-212ENST00000466845 ZNF638Q14966 1978 aaKnown RBP4.46□□□□□ -1.7
LRCH3-212ENST00000466845 NUP210LQ5VU65 1888 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 TEX48A0A1B0GUV7 120 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 TRDV1A0A1B0GX56 115 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 IGLC7A0M8Q6 106 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 ODAMA1E959 279 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 PLAC8L1A1L4L8 177 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 J3QT63 122 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 RER1O15258 196 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 NCR2O95944 276 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 OR9G9P0C7N8 305 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 CA6P23280 308 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 PFN2P35080 140 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 RND2P52198 227 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 SLC18A1P54219 525 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 HMGN3Q15651 99 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 CD226Q15762 336 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 DUSP5Q16690 384 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 ECSCRQ19T08 205 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 PAPPA-AS1Q5QFB9 102 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 LYRM7Q5U5X0 104 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 ZNF324BQ6AW86 544 aaPredicted RBP4.46□□□□□ -1.7
LRCH3-212ENST00000466845 CGB2Q6NT52 195 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 Q6ZUT4 128 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 TMEM179BQ7Z7N9 219 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 NPWQ8N729 165 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 FGF11Q92914 225 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 SLC25A38Q96DW6 304 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 IGF2BP2-AS1Q96M15 143 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 Q9HAA7 133 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 PLAC1Q9HBJ0 212 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 EXOSC3Q9NQT5 275 aaKnown RBP4.46□□□□□ -1.7
LRCH3-212ENST00000466845 CLCF1Q9UBD9 225 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 PYGO1Q9Y3Y4 419 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 ARID2Q68CP9 1835 aa4.46□□□□□ -1.7
LRCH3-212ENST00000466845 CUL9Q8IWT3 2517 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 SZT2Q5T011 3432 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 LAMA3Q16787 3333 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 CROCCQ5TZA2 2017 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 A0A087X0T9 212 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 TRGV10A0A0A0MS01 117 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 TRAV4A0A0B4J268 109 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 LOC101059948A0A1B0GTJ6 334 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 FAM236AA0A1B0GUQ0 79 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 FAM236BA0A1B0GV22 79 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 KNCNA6PVL3 124 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 K7EP34 96 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 WNT9BO14905 357 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 CA2P00918 260 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 HRASP01112 189 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 KRASP01116 189 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 IFITM1P13164 125 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 ZNF93P35789 620 aaPredicted RBP4.45□□□□□ -1.7
LRCH3-212ENST00000466845 MYCNOSP40205 109 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 OPRK1P41145 380 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 HERVK_113P63121 156 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 DEFB103AP81534 67 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 DIAPH2-AS1Q14236 149 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 SLC25A30Q5SVS4 291 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 GFI1BQ5VTD9 330 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 Q6AWC8 147 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 LRP11Q86VZ4 500 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 KCNRGQ8N5I3 272 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 OR52N5Q8NH56 324 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 OR4A5Q8NH83 315 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 PHLDA1Q8WV24 401 aaPredicted RBP4.45□□□□□ -1.7
LRCH3-212ENST00000466845 ZC2HC1AQ96GY0 325 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 KXD1Q9BQD3 176 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 RPUSD1Q9UJJ7 312 aaKnown RBP4.45□□□□□ -1.7
LRCH3-212ENST00000466845 WASHC3Q9Y3C0 194 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 MPC1Q9Y5U8 109 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 DOCK5Q9H7D0 1870 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 COL4A4P53420 1690 aaPredicted RBP4.45□□□□□ -1.7
LRCH3-212ENST00000466845 RALGAPA1Q6GYQ0 2036 aa4.45□□□□□ -1.7
LRCH3-212ENST00000466845 TRIP12Q14669 1992 aaPredicted RBP4.44□□□□□ -1.7
LRCH3-212ENST00000466845 A0A087WZ39 114 aa4.44□□□□□ -1.7
LRCH3-212ENST00000466845 TRAV8-2A0A0B4J237 113 aa4.44□□□□□ -1.7
LRCH3-212ENST00000466845 TCRBV3S1A0A5B6 114 aa4.44□□□□□ -1.7
LRCH3-212ENST00000466845 PDCD6O75340 191 aa4.44□□□□□ -1.7
LRCH3-212ENST00000466845 KLF7O75840 302 aaPredicted RBP4.44□□□□□ -1.7
LRCH3-212ENST00000466845 SIX6O95475 246 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms