RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 BMPR1BO00238 502 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 TRBV12-3P01733 135 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 OR13C7P0DN81 318 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 BTCP35070 178 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 AKR1C2P52895 323 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 MFAP2P55001 183 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 RAB25P57735 213 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 KRTAP10-11P60412 298 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 UBE2MP61081 183 aaKnown RBP7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 RBMS2Q15434 407 aaKnown RBP7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 IZUMO4Q1ZYL8 232 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 TMEM128Q5BJH2 165 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 TRIQKQ629K1 86 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 ZNF57Q68EA5 555 aaPredicted RBP7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 PVRIGQ6DKI7 326 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 ACSM6Q6P461 480 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 Q6ZRM9 215 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 OR2C3Q8N628 320 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 LRTM2Q8N967 370 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 OR1L6Q8NGR2 347 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 OR1P1Q8NH06 330 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 OR52E5Q8NH55 327 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 VN1R17PQ8TDU5 208 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 CXorf58Q96LI9 332 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 CCDC140Q96MF4 163 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 PTTG2Q9NZH5 202 aa7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 ZMAT5Q9UDW3 170 aaKnown RBP7.26□□□□□ -1.25
SDCCAG3-208ENST00000466579 TRBV7-1A0A0A6YYK4 115 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 A0A0B4J2A0 478 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 ANKRD34BA5PLL1 514 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 PLA2G10O15496 165 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 CYB5BO43169 146 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 ST8SIA3O43173 380 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 NDUFB6O95139 128 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 DEFA4P12838 97 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 SRPXP78539 464 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 NMSQ5H8A3 153 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 IL34Q6ZMJ4 242 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 ZNF502Q8TBZ5 544 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 S100ZQ8WXG8 99 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 EEF1AKMT3Q96AZ1 226 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 RRNAD1Q96FB5 475 aaKnown RBP7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 CCDC32Q9BV29 185 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 AURKAIP1Q9NWT8 199 aaPredicted RBP7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 SIGLEC8Q9NYZ4 499 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 THYN1Q9P016 225 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 SHPKQ9UHJ6 478 aa7.25□□□□□ -1.25
SDCCAG3-208ENST00000466579 PIGBOS1A0A0B4J2F0 54 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 DUXBA0A1W2PPF3 345 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 MFSD2BA6NFX1 497 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 K7EIM0 57 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 SFT2D2O95562 160 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 HLA-AP01891 365 aaKnown RBP7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 ANXA3P12429 323 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 AKR1C4P17516 323 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 CCR6P51684 374 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 BSXQ3C1V8 233 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 TMEM268Q5VZI3 342 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 GPHB5Q86YW7 130 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 LGI3Q8N145 548 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 SLC35G3Q8N808 338 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 GPR146Q96CH1 333 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 HINT2Q9BX68 163 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 PLEKHA3Q9HB20 300 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 CACFD1Q9UGQ2 172 aa7.24□□□□□ -1.25
SDCCAG3-208ENST00000466579 SORL1Q92673 2214 aa7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 CENPXA8MT69 81 aa7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 F8W735 103 aaPredicted RBP7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 I3L2K1 104 aa7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 LGALS9O00182 355 aa7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 GGCTO75223 188 aaKnown RBP7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 FCGR2BP31994 310 aaPredicted RBP7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 INPP1P49441 399 aa7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 MECP2P51608 486 aaKnown RBP7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 SYNJ2BPP57105 145 aa7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 SPCS3P61009 180 aa7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 ERHP84090 104 aaKnown RBP7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 PPP1R1AQ13522 171 aa7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 RPEL1Q2QD12 228 aa7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 SLC25A24Q6NUK1 477 aa7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 TMED4Q7Z7H5 227 aa7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 CENPSQ8N2Z9 138 aa7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 OR9G4Q8NGQ1 327 aa7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 CACNG5Q9UF02 275 aa7.23□□□□□ -1.25
SDCCAG3-208ENST00000466579 PPP5D1E7EU14 171 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 K7EIL1 84 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 LYRM1O43325 122 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 PITX3O75364 302 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 IFNA17P01571 189 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 IGLV1-51P01701 117 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 PRB2P02812 416 aaPredicted RBP7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 CSN3P07498 182 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 SULT1A3P0DMM9 295 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 SULT1A4P0DMN0 295 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 RNASE2P10153 161 aaKnown RBP7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 SLC25A6P12236 298 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 TATDN3Q17R31 274 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 ANKRD55Q3KP44 614 aa7.22□□□□□ -1.25
SDCCAG3-208ENST00000466579 CLEC19AQ6UXS0 136 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms