RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 PLEKHA3Q9HB20 300 aa15.69■□□□□ 0.1
PTCD3-206ENST00000465560 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.69■□□□□ 0.1
PTCD3-206ENST00000465560 NOTCH3Q9UM47 2321 aa15.69■□□□□ 0.1
PTCD3-206ENST00000465560 FAM240BA0A1B0GVZ2 78 aa15.68■□□□□ 0.1
PTCD3-206ENST00000465560 C9orf170A2RU37 121 aa15.68■□□□□ 0.1
PTCD3-206ENST00000465560 IFNA17P01571 189 aa15.68■□□□□ 0.1
PTCD3-206ENST00000465560 HLA-AP01891 365 aaKnown RBP15.68■□□□□ 0.1
PTCD3-206ENST00000465560 OR4E1P0C645 316 aa15.68■□□□□ 0.1
PTCD3-206ENST00000465560 OR8U8P0C7N1 319 aa15.68■□□□□ 0.1
PTCD3-206ENST00000465560 RAB25P57735 213 aa15.68■□□□□ 0.1
PTCD3-206ENST00000465560 ATP5G2Q06055 141 aa15.68■□□□□ 0.1
PTCD3-206ENST00000465560 C15orf32Q32M92 178 aa15.68■□□□□ 0.1
PTCD3-206ENST00000465560 ZNF343Q6P1L6 599 aa15.68■□□□□ 0.1
PTCD3-206ENST00000465560 DPF1Q92782 380 aa15.68■□□□□ 0.1
PTCD3-206ENST00000465560 FBXL7Q9UJT9 491 aa15.68■□□□□ 0.1
PTCD3-206ENST00000465560 F11RQ9Y624 299 aaKnown RBP15.68■□□□□ 0.1
PTCD3-206ENST00000465560 IGHV4OR15-8A0A075B7B6 117 aa15.67■□□□□ 0.1
PTCD3-206ENST00000465560 A0A087WW49 117 aa15.67■□□□□ 0.1
PTCD3-206ENST00000465560 INS-IGF2F8WCM5 200 aa15.67■□□□□ 0.1
PTCD3-206ENST00000465560 LINC01619G3V211 115 aa15.67■□□□□ 0.1
PTCD3-206ENST00000465560 CYB5BO43169 146 aa15.67■□□□□ 0.1
PTCD3-206ENST00000465560 HSPB1P04792 205 aaKnown RBP15.67■□□□□ 0.1
PTCD3-206ENST00000465560 SULT1A3P0DMM9 295 aa15.67■□□□□ 0.1
PTCD3-206ENST00000465560 SULT1A4P0DMN0 295 aa15.67■□□□□ 0.1
PTCD3-206ENST00000465560 DHRS2Q13268 280 aa15.67■□□□□ 0.1
PTCD3-206ENST00000465560 EXOSC2Q13868 293 aaKnown RBP15.67■□□□□ 0.1
PTCD3-206ENST00000465560 LYG2Q86SG7 212 aa15.67■□□□□ 0.1
PTCD3-206ENST00000465560 OR2C3Q8N628 320 aa15.67■□□□□ 0.1
PTCD3-206ENST00000465560 OR52E5Q8NH55 327 aa15.67■□□□□ 0.1
PTCD3-206ENST00000465560 NUDT15Q9NV35 164 aa15.67■□□□□ 0.1
PTCD3-206ENST00000465560 DMRT1Q9Y5R6 373 aa15.67■□□□□ 0.1
PTCD3-206ENST00000465560 NDUFB8O95169 186 aa15.66■□□□□ 0.1
PTCD3-206ENST00000465560 C4orf46Q504U0 113 aa15.66■□□□□ 0.1
PTCD3-206ENST00000465560 PDLIM3Q53GG5 364 aaPredicted RBP15.66■□□□□ 0.1
PTCD3-206ENST00000465560 SPINK9Q5DT21 86 aa15.66■□□□□ 0.1
PTCD3-206ENST00000465560 ZNF114Q8NC26 417 aa15.66■□□□□ 0.1
PTCD3-206ENST00000465560 RANGRFQ9HD47 186 aaPredicted RBP15.66■□□□□ 0.1
PTCD3-206ENST00000465560 THYN1Q9P016 225 aa15.66■□□□□ 0.1
PTCD3-206ENST00000465560 FBN3Q75N90 2809 aa15.66■□□□□ 0.1
PTCD3-206ENST00000465560 TRAV6A0A075B6T7 132 aa15.65■□□□□ 0.1
PTCD3-206ENST00000465560 DUS4LO95620 317 aaKnown RBP15.65■□□□□ 0.1
PTCD3-206ENST00000465560 SPCS3P61009 180 aa15.65■□□□□ 0.1
PTCD3-206ENST00000465560 ERHP84090 104 aaKnown RBP15.65■□□□□ 0.1
PTCD3-206ENST00000465560 SMCO1Q147U7 214 aa15.65■□□□□ 0.1
PTCD3-206ENST00000465560 OR1L6Q8NGR2 347 aa15.65■□□□□ 0.1
PTCD3-206ENST00000465560 OR1P1Q8NH06 330 aa15.65■□□□□ 0.1
PTCD3-206ENST00000465560 RCC1LQ96I51 464 aaKnown RBP15.65■□□□□ 0.1
PTCD3-206ENST00000465560 PEF1Q9UBV8 284 aaKnown RBP15.65■□□□□ 0.1
PTCD3-206ENST00000465560 CACFD1Q9UGQ2 172 aa15.65■□□□□ 0.1
PTCD3-206ENST00000465560 TMED3Q9Y3Q3 217 aa15.65■□□□□ 0.1
PTCD3-206ENST00000465560 ANKRD34BA5PLL1 514 aa15.64■□□□□ 0.09
PTCD3-206ENST00000465560 HOXA1P49639 335 aaPredicted RBP15.64■□□□□ 0.09
PTCD3-206ENST00000465560 MFAP2P55001 183 aa15.64■□□□□ 0.09
PTCD3-206ENST00000465560 FAM209BQ5JX69 171 aa15.64■□□□□ 0.09
PTCD3-206ENST00000465560 SLC25A24Q6NUK1 477 aa15.64■□□□□ 0.09
PTCD3-206ENST00000465560 COQ8AQ8NI60 647 aa15.64■□□□□ 0.09
PTCD3-206ENST00000465560 ENKURQ8TC29 256 aa15.64■□□□□ 0.09
PTCD3-206ENST00000465560 ENY2Q9NPA8 101 aa15.64■□□□□ 0.09
PTCD3-206ENST00000465560 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.63■□□□□ 0.09
PTCD3-206ENST00000465560 A0A1B0GU03 582 aa15.63■□□□□ 0.09
PTCD3-206ENST00000465560 TRBV12-3P01733 135 aa15.63■□□□□ 0.09
PTCD3-206ENST00000465560 H2AFB2P0C5Z0 115 aa15.63■□□□□ 0.09
PTCD3-206ENST00000465560 SLC25A6P12236 298 aa15.63■□□□□ 0.09
PTCD3-206ENST00000465560 SLURP1P55000 103 aa15.63■□□□□ 0.09
PTCD3-206ENST00000465560 DEFA1P59665 94 aa15.63■□□□□ 0.09
PTCD3-206ENST00000465560 DEFA3P59666 94 aa15.63■□□□□ 0.09
PTCD3-206ENST00000465560 EEF1AKMT3Q96AZ1 226 aa15.63■□□□□ 0.09
PTCD3-206ENST00000465560 CXorf58Q96LI9 332 aa15.63■□□□□ 0.09
PTCD3-206ENST00000465560 MFSD2BA6NFX1 497 aa15.62■□□□□ 0.09
PTCD3-206ENST00000465560 HOXB5P09067 269 aa15.62■□□□□ 0.09
PTCD3-206ENST00000465560 ZP3P21754 424 aa15.62■□□□□ 0.09
PTCD3-206ENST00000465560 SAMD5Q5TGI4 173 aa15.62■□□□□ 0.09
PTCD3-206ENST00000465560 OR52B4Q8NGK2 314 aa15.62■□□□□ 0.09
PTCD3-206ENST00000465560 NOTCH1P46531 2555 aa15.62■□□□□ 0.09
PTCD3-206ENST00000465560 PITX3O75364 302 aa15.61■□□□□ 0.09
PTCD3-206ENST00000465560 IGLL1P15814 213 aa15.61■□□□□ 0.09
PTCD3-206ENST00000465560 HOXD3P31249 432 aaPredicted RBP15.61■□□□□ 0.09
PTCD3-206ENST00000465560 SNCAP37840 140 aa15.61■□□□□ 0.09
PTCD3-206ENST00000465560 GGNBP1Q5YKI7 109 aa15.61■□□□□ 0.09
PTCD3-206ENST00000465560 OR1S1Q8NH92 325 aa15.61■□□□□ 0.09
PTCD3-206ENST00000465560 VN1R17PQ8TDU5 208 aa15.61■□□□□ 0.09
PTCD3-206ENST00000465560 MITD1Q8WV92 249 aa15.61■□□□□ 0.09
PTCD3-206ENST00000465560 DCUN1D4Q92564 292 aa15.61■□□□□ 0.09
PTCD3-206ENST00000465560 CCDC140Q96MF4 163 aa15.61■□□□□ 0.09
PTCD3-206ENST00000465560 MCRIP2Q9BUT9 160 aaKnown RBP15.61■□□□□ 0.09
PTCD3-206ENST00000465560 HSPB7Q9UBY9 170 aa15.61■□□□□ 0.09
PTCD3-206ENST00000465560 TRBV7-1A0A0A6YYK4 115 aa15.6■□□□□ 0.09
PTCD3-206ENST00000465560 G3V4G9 280 aa15.6■□□□□ 0.09
PTCD3-206ENST00000465560 NXPH3O95157 252 aa15.6■□□□□ 0.09
PTCD3-206ENST00000465560 IGHV3-23P01764 117 aa15.6■□□□□ 0.09
PTCD3-206ENST00000465560 TNFRSF9Q07011 255 aa15.6■□□□□ 0.09
PTCD3-206ENST00000465560 OXLD1Q5BKU9 147 aa15.6■□□□□ 0.09
PTCD3-206ENST00000465560 NRARPQ7Z6K4 114 aa15.6■□□□□ 0.09
PTCD3-206ENST00000465560 DUSP18Q8NEJ0 188 aa15.6■□□□□ 0.09
PTCD3-206ENST00000465560 DLX4Q92988 240 aaPredicted RBP15.6■□□□□ 0.09
PTCD3-206ENST00000465560 S4R3C0 116 aa15.6■□□□□ 0.09
PTCD3-206ENST00000465560 CEBPZOSA8MTT3 80 aa15.59■□□□□ 0.09
PTCD3-206ENST00000465560 BMPR1BO00238 502 aa15.59■□□□□ 0.09
PTCD3-206ENST00000465560 ADAP1O75689 374 aa15.59■□□□□ 0.09
PTCD3-206ENST00000465560 RNASE2P10153 161 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms