RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 ZNF596Q8TC21 504 aa11.73□□□□□ -0.53
COL5A1-205ENST00000464187 GATAD1Q8WUU5 269 aa11.73□□□□□ -0.53
COL5A1-205ENST00000464187 BIN3Q9NQY0 253 aa11.73□□□□□ -0.53
COL5A1-205ENST00000464187 GCN1Q92616 2671 aaKnown RBP11.72□□□□□ -0.53
COL5A1-205ENST00000464187 ARHGAP32A7KAX9 2087 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 IGHV2-26A0A0B4J1V2 119 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 C1orf196B1AJZ1 125 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 CYB5BO43169 146 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 IFNA4P05014 189 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 MEF2BQ02080 365 aaPredicted RBP11.72□□□□□ -0.53
COL5A1-205ENST00000464187 PAX2Q02962 417 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 DEFB113Q30KQ7 82 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 LINC00311Q8N616 119 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 C1orf159Q96HA4 380 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 GGTLC1Q9BX51 225 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 ENY2Q9NPA8 101 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 MANBALQ9NQG1 85 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 BEX4Q9NWD9 120 aaPredicted RBP11.72□□□□□ -0.53
COL5A1-205ENST00000464187 PRNDQ9UKY0 176 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 H0YJW9 148 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 FOXH1O75593 365 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 YIF1AO95070 293 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 CA2P00918 260 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 SAA1P0DJI8 122 aaPredicted RBP11.72□□□□□ -0.53
COL5A1-205ENST00000464187 OPRK1P41145 380 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 PSMB3P49720 205 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 ARSJQ5FYB0 599 aaPredicted RBP11.72□□□□□ -0.53
COL5A1-205ENST00000464187 MALSU1Q96EH3 234 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 SIRT7Q9NRC8 400 aa11.72□□□□□ -0.53
COL5A1-205ENST00000464187 NAV2Q8IVL1 2488 aa11.71□□□□□ -0.53
COL5A1-205ENST00000464187 IGHV2-70DA0A0C4DH43 119 aa11.71□□□□□ -0.54
COL5A1-205ENST00000464187 SOX15O60248 233 aa11.71□□□□□ -0.54
COL5A1-205ENST00000464187 APOA2P02652 100 aa11.71□□□□□ -0.54
COL5A1-205ENST00000464187 COX7A1P24310 79 aa11.71□□□□□ -0.54
COL5A1-205ENST00000464187 PRCDQ00LT1 54 aa11.71□□□□□ -0.54
COL5A1-205ENST00000464187 PNRC1Q12796 327 aaPredicted RBP11.71□□□□□ -0.54
COL5A1-205ENST00000464187 TNFRSF14Q92956 283 aa11.71□□□□□ -0.54
COL5A1-205ENST00000464187 HINT2Q9BX68 163 aa11.71□□□□□ -0.54
COL5A1-205ENST00000464187 CLEC7AQ9BXN2 247 aa11.71□□□□□ -0.54
COL5A1-205ENST00000464187 LPAR2Q9HBW0 351 aa11.71□□□□□ -0.54
COL5A1-205ENST00000464187 SDF2L1Q9HCN8 221 aa11.71□□□□□ -0.54
COL5A1-205ENST00000464187 BET1LQ9NYM9 111 aa11.71□□□□□ -0.54
COL5A1-205ENST00000464187 ZNF257Q9Y2Q1 563 aa11.71□□□□□ -0.54
COL5A1-205ENST00000464187 LSM4Q9Y4Z0 139 aaKnown RBP11.71□□□□□ -0.54
COL5A1-205ENST00000464187 APCP25054 2843 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 B4DEV8 164 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 IGLV1-47P01700 117 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 REG1BP48304 166 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 MIC13Q5XKP0 118 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 ZNF343Q6P1L6 599 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 C1orf122Q6ZSJ8 110 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 IQCF2Q8IXL9 164 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 KIR3DL3Q8N743 410 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 TMEM186Q96B77 213 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 PLEKHA3Q9HB20 300 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 PXMP4Q9Y6I8 212 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 ANKRD17O75179 2603 aaKnown RBP11.7□□□□□ -0.54
COL5A1-205ENST00000464187 TEX50A0A1B0GTY4 177 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 KBTBD11O94819 623 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 SLC25A16P16260 332 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 PRTN3P24158 256 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 ZNF137PP52743 207 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 PRRX1P54821 245 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 DIAPH2-AS1Q14236 149 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 ELOBQ15370 118 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 HLA-DRB5Q30154 266 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 LRRC75A-AS1Q8N1F1 130 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 PNKDQ8N490 385 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 OR5AN1Q8NGI8 311 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 OSR1Q8TAX0 266 aaPredicted RBP11.7□□□□□ -0.54
COL5A1-205ENST00000464187 Q8WTZ3 238 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 HARBI1Q96MB7 349 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 NPVFQ9HCQ7 196 aa11.7□□□□□ -0.54
COL5A1-205ENST00000464187 POLR3KQ9Y2Y1 108 aaPredicted RBP11.7□□□□□ -0.54
COL5A1-205ENST00000464187 FASNP49327 2511 aaKnown RBP11.69□□□□□ -0.54
COL5A1-205ENST00000464187 MAP1AP78559 2803 aaPredicted RBP11.69□□□□□ -0.54
COL5A1-205ENST00000464187 TMEM250H0YL14 139 aa11.69□□□□□ -0.54
COL5A1-205ENST00000464187 PAGE4O60829 102 aa11.69□□□□□ -0.54
COL5A1-205ENST00000464187 NDUFS6O75380 124 aaKnown RBP11.69□□□□□ -0.54
COL5A1-205ENST00000464187 OPN1MWP04001 364 aa11.69□□□□□ -0.54
COL5A1-205ENST00000464187 OPN1MW2P0DN77 364 aa11.69□□□□□ -0.54
COL5A1-205ENST00000464187 OPN1MW3P0DN78 364 aa11.69□□□□□ -0.54
COL5A1-205ENST00000464187 TMEM177Q53S58 311 aa11.69□□□□□ -0.54
COL5A1-205ENST00000464187 FAM71F2Q6NXP2 309 aa11.69□□□□□ -0.54
COL5A1-205ENST00000464187 BEND2Q8NDZ0 799 aa11.69□□□□□ -0.54
COL5A1-205ENST00000464187 ST6GALNAC6Q969X2 333 aa11.69□□□□□ -0.54
COL5A1-205ENST00000464187 NABP2Q9BQ15 211 aa11.69□□□□□ -0.54
COL5A1-205ENST00000464187 SMIM7Q9BQ49 75 aa11.69□□□□□ -0.54
COL5A1-205ENST00000464187 PRELID1Q9Y255 219 aa11.69□□□□□ -0.54
COL5A1-205ENST00000464187 CXorf65A6NEN9 183 aa11.68□□□□□ -0.54
COL5A1-205ENST00000464187 USF1P22415 310 aaPredicted RBP11.68□□□□□ -0.54
COL5A1-205ENST00000464187 TMEM249Q2WGJ8 235 aa11.68□□□□□ -0.54
COL5A1-205ENST00000464187 VMO1Q7Z5L0 202 aa11.68□□□□□ -0.54
COL5A1-205ENST00000464187 OR4P4Q8NGL7 312 aa11.68□□□□□ -0.54
COL5A1-205ENST00000464187 OR4F5Q8NH21 305 aa11.68□□□□□ -0.54
COL5A1-205ENST00000464187 SSMEM1Q8WWF3 244 aa11.68□□□□□ -0.54
COL5A1-205ENST00000464187 OR4F4Q96R69 305 aa11.68□□□□□ -0.54
COL5A1-205ENST00000464187 SIRPDQ9H106 197 aa11.68□□□□□ -0.54
COL5A1-205ENST00000464187 FNDC10F2Z333 226 aa11.67□□□□□ -0.54
COL5A1-205ENST00000464187 BUB1B-PAK6H3BSN5 160 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms