RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 LCE6AA0A183 80 aa14.12□□□□□ -0.15
SF3A1-205ENST00000463818 OR2T8A6NH00 312 aa14.12□□□□□ -0.15
SF3A1-205ENST00000463818 S100GP29377 79 aa14.12□□□□□ -0.15
SF3A1-205ENST00000463818 ANKRD55Q3KP44 614 aa14.12□□□□□ -0.15
SF3A1-205ENST00000463818 RBPMS2Q6ZRY4 209 aaKnown RBP14.12□□□□□ -0.15
SF3A1-205ENST00000463818 SLIRPQ9GZT3 109 aaKnown RBP14.12□□□□□ -0.15
SF3A1-205ENST00000463818 MIXL1Q9H2W2 232 aa14.12□□□□□ -0.15
SF3A1-205ENST00000463818 FKBP11Q9NYL4 201 aa14.12□□□□□ -0.15
SF3A1-205ENST00000463818 PRNDQ9UKY0 176 aa14.12□□□□□ -0.15
SF3A1-205ENST00000463818 SACSQ9NZJ4 4579 aa14.11□□□□□ -0.15
SF3A1-205ENST00000463818 DBX1A6NMT0 343 aa14.11□□□□□ -0.15
SF3A1-205ENST00000463818 NOL3O60936 208 aaKnown RBP14.11□□□□□ -0.15
SF3A1-205ENST00000463818 TBC1D26Q86UD7 250 aa14.11□□□□□ -0.15
SF3A1-205ENST00000463818 SCARB1Q8WTV0 552 aa14.11□□□□□ -0.15
SF3A1-205ENST00000463818 TMEM56Q96MV1 263 aa14.11□□□□□ -0.15
SF3A1-205ENST00000463818 TSC22D3Q99576 134 aa14.11□□□□□ -0.15
SF3A1-205ENST00000463818 NXF2Q9GZY0 626 aaKnown RBP14.11□□□□□ -0.15
SF3A1-205ENST00000463818 C21orf62Q9NYP8 219 aa14.11□□□□□ -0.15
SF3A1-205ENST00000463818 RCVRNP35243 200 aa14.1□□□□□ -0.15
SF3A1-205ENST00000463818 UCP3P55916 312 aa14.1□□□□□ -0.15
SF3A1-205ENST00000463818 OR5B3Q8NH48 314 aa14.1□□□□□ -0.15
SF3A1-205ENST00000463818 TMEM190Q8WZ59 177 aa14.1□□□□□ -0.15
SF3A1-205ENST00000463818 BSCL2Q96G97 398 aaPredicted RBP14.1□□□□□ -0.15
SF3A1-205ENST00000463818 CHRDL1Q9BU40 450 aa14.1□□□□□ -0.15
SF3A1-205ENST00000463818 FAM212BQ9NTI7 297 aaPredicted RBP14.1□□□□□ -0.15
SF3A1-205ENST00000463818 TMEM14BQ9NUH8 114 aa14.1□□□□□ -0.15
SF3A1-205ENST00000463818 CSMD3Q7Z407 3707 aa14.09□□□□□ -0.15
SF3A1-205ENST00000463818 K7EIM0 57 aa14.09□□□□□ -0.15
SF3A1-205ENST00000463818 SPSB3Q6PJ21 355 aa14.09□□□□□ -0.15
SF3A1-205ENST00000463818 SLC38A6Q8IZM9 456 aa14.09□□□□□ -0.15
SF3A1-205ENST00000463818 OR1L6Q8NGR2 347 aa14.09□□□□□ -0.15
SF3A1-205ENST00000463818 C15orf40Q8WUR7 153 aa14.09□□□□□ -0.15
SF3A1-205ENST00000463818 SEC22AQ96IW7 307 aa14.09□□□□□ -0.15
SF3A1-205ENST00000463818 ATP6V0BQ99437 205 aa14.09□□□□□ -0.15
SF3A1-205ENST00000463818 C5orf66Q9H5L9 145 aa14.09□□□□□ -0.15
SF3A1-205ENST00000463818 C15orf61A6NNL5 157 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 FAM25AB3EWG3 89 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 FAM25CB3EWG5 89 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 FAM25GB3EWG6 89 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 F8W735 103 aaPredicted RBP14.08□□□□□ -0.16
SF3A1-205ENST00000463818 M0QYG6 137 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 NDUFA4O00483 81 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 IGKV1-39P01597 117 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 IGKV1D-39P04432 117 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 ADMP35318 185 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 H2BFWTQ7Z2G1 175 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 OR2C3Q8N628 320 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 UBAC2Q8NBM4 344 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 OR4A16Q8NH70 328 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 IL17DQ8TAD2 202 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 GGTLC1Q9BX51 225 aa14.08□□□□□ -0.16
SF3A1-205ENST00000463818 LOC102724200A0A096LPH7 203 aaPredicted RBP14.07□□□□□ -0.16
SF3A1-205ENST00000463818 Q56UQ5 140 aa14.07□□□□□ -0.16
SF3A1-205ENST00000463818 OR1P1Q8NH06 330 aa14.07□□□□□ -0.16
SF3A1-205ENST00000463818 C20orf24Q9BUV8 137 aa14.07□□□□□ -0.16
SF3A1-205ENST00000463818 DAZ1Q9NQZ3 744 aaKnown RBP14.07□□□□□ -0.16
SF3A1-205ENST00000463818 RABL2AQ9UBK7 228 aaPredicted RBP14.07□□□□□ -0.16
SF3A1-205ENST00000463818 EXTL2Q9UBQ6 330 aa14.07□□□□□ -0.16
SF3A1-205ENST00000463818 RABL2BQ9UNT1 228 aa14.07□□□□□ -0.16
SF3A1-205ENST00000463818 IGHV3OR16-8A0A075B7F1 116 aa14.06□□□□□ -0.16
SF3A1-205ENST00000463818 K7EMT4 169 aa14.06□□□□□ -0.16
SF3A1-205ENST00000463818 CTDSP2O14595 271 aa14.06□□□□□ -0.16
SF3A1-205ENST00000463818 CTSGP08311 255 aa14.06□□□□□ -0.16
SF3A1-205ENST00000463818 RNASE12Q5GAN4 147 aaKnown RBP14.06□□□□□ -0.16
SF3A1-205ENST00000463818 LAMTOR1Q6IAA8 161 aa14.06□□□□□ -0.16
SF3A1-205ENST00000463818 MRGPRFQ96AM1 343 aa14.06□□□□□ -0.16
SF3A1-205ENST00000463818 ABHD1Q96SE0 405 aa14.06□□□□□ -0.16
SF3A1-205ENST00000463818 KLK11Q9UBX7 282 aa14.06□□□□□ -0.16
SF3A1-205ENST00000463818 RSL24D1Q9UHA3 163 aaKnown RBP14.06□□□□□ -0.16
SF3A1-205ENST00000463818 TSPAN4O14817 238 aa14.05□□□□□ -0.16
SF3A1-205ENST00000463818 ZNF207O43670 478 aaKnown RBP14.05□□□□□ -0.16
SF3A1-205ENST00000463818 HSPE1P61604 102 aaKnown RBP14.05□□□□□ -0.16
SF3A1-205ENST00000463818 MRPS10P82664 201 aaKnown RBP14.05□□□□□ -0.16
SF3A1-205ENST00000463818 MISP3Q96FF7 219 aa14.05□□□□□ -0.16
SF3A1-205ENST00000463818 SPAG8Q99932 426 aaPredicted RBP14.05□□□□□ -0.16
SF3A1-205ENST00000463818 OVOL2Q9BRP0 275 aa14.05□□□□□ -0.16
SF3A1-205ENST00000463818 LYSTQ99698 3801 aa14.04□□□□□ -0.16
SF3A1-205ENST00000463818 I3L2K1 104 aa14.04□□□□□ -0.16
SF3A1-205ENST00000463818 CTDSPLO15194 276 aa14.04□□□□□ -0.16
SF3A1-205ENST00000463818 PGAM2P15259 253 aa14.04□□□□□ -0.16
SF3A1-205ENST00000463818 MFAP4P55083 255 aa14.04□□□□□ -0.16
SF3A1-205ENST00000463818 SSBP1Q04837 148 aaKnown RBP14.04□□□□□ -0.16
SF3A1-205ENST00000463818 OR52I2Q8NH67 350 aa14.04□□□□□ -0.16
SF3A1-205ENST00000463818 SOSTQ9BQB4 213 aa14.04□□□□□ -0.16
SF3A1-205ENST00000463818 MTFP1Q9UDX5 166 aa14.04□□□□□ -0.16
SF3A1-205ENST00000463818 UBQLN2Q9UHD9 624 aa14.04□□□□□ -0.16
SF3A1-205ENST00000463818 GABARAPH6UMI1 98 aa14.03□□□□□ -0.16
SF3A1-205ENST00000463818 RGS5O15539 181 aa14.03□□□□□ -0.16
SF3A1-205ENST00000463818 CD3DP04234 171 aa14.03□□□□□ -0.16
SF3A1-205ENST00000463818 PI3P19957 117 aa14.03□□□□□ -0.16
SF3A1-205ENST00000463818 RND3P61587 244 aa14.03□□□□□ -0.16
SF3A1-205ENST00000463818 PRCDQ00LT1 54 aa14.03□□□□□ -0.16
SF3A1-205ENST00000463818 RNASE10Q5GAN6 216 aaKnown RBP14.03□□□□□ -0.16
SF3A1-205ENST00000463818 C15orf62A8K5M9 175 aa14.02□□□□□ -0.17
SF3A1-205ENST00000463818 NUPL2O15504 423 aaKnown RBP14.02□□□□□ -0.17
SF3A1-205ENST00000463818 MT-CO2P00403 227 aa14.02□□□□□ -0.17
SF3A1-205ENST00000463818 IGHV3-48P01763 117 aa14.02□□□□□ -0.17
SF3A1-205ENST00000463818 TBPP20226 339 aa14.02□□□□□ -0.17
SF3A1-205ENST00000463818 FCGR2BP31994 310 aaPredicted RBP14.02□□□□□ -0.17
SF3A1-205ENST00000463818 ERHP84090 104 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms