RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 TMEM170AQ8WVE7 144 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 COQ2Q96H96 371 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 RBM14Q96PK6 669 aaKnown RBP6.33□□□□□ -1.4
USP4-207ENST00000462673 RAB40CQ96S21 281 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 TP53RKQ96S44 253 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 PARD6GQ9BYG4 376 aaPredicted RBP6.33□□□□□ -1.4
USP4-207ENST00000462673 SDF2L1Q9HCN8 221 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 MBNL3Q9NUK0 354 aaKnown RBP6.33□□□□□ -1.4
USP4-207ENST00000462673 CALYQ9NYX4 217 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 VAX2Q9UIW0 290 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 FLNAP21333 2647 aaKnown RBP6.33□□□□□ -1.4
USP4-207ENST00000462673 ABCA1O95477 2261 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 MALRD1Q5VYJ5 2156 aa6.33□□□□□ -1.4
USP4-207ENST00000462673 KIR2DL5BA0A0G2JN68 375 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 KIR2DL5BA0A0G2JPC4 375 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 XKRY2A2RUG3 117 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 MAP1LC3B2A6NCE7 125 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 ZFP92A6NM28 416 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 OOSP1A8MZH6 123 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 H7BYZ3 331 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 PHOX2AO14813 284 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 FCN3O75636 299 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 KBTBD11O94819 623 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 HRASP01112 189 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 FSHBP01225 129 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 CGB3P0DN86 165 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 CGB7P0DN87 165 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 GZMBP10144 247 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 SLC25A6P12236 298 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 VDAC1P21796 283 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 OMGP23515 440 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 UCP1P25874 307 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 GNRHRP30968 328 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 FAM3BP58499 235 aaPredicted RBP6.32□□□□□ -1.4
USP4-207ENST00000462673 RUNX1Q01196 453 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 ADIRFQ15847 76 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 TMEM41BQ5BJD5 291 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 NMSQ5H8A3 153 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 IL17RELQ6ZVW7 336 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 C16orf82Q7Z2V1 217 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 TBC1D26Q86UD7 250 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 SELENOHQ8IZQ5 122 aaKnown RBP6.32□□□□□ -1.4
USP4-207ENST00000462673 KIR2DL5AQ8N109 375 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 FGFRL1Q8N441 504 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 PNKDQ8N490 385 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 PRR18Q8N4B5 295 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 C11orf42Q8N5U0 333 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 TMEM86BQ8N661 226 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 C8orf31Q8N9H6 132 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 OR13A1Q8NGR1 328 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 OR10X1Q8NGY0 326 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 OR4X1Q8NH49 305 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 PLPPR1Q8TBJ4 325 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 ABHD5Q8WTS1 349 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 FAM216AQ8WUB2 273 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 SSMEM1Q8WWF3 244 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 MBD3L1Q8WWY6 194 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 PINX1Q96BK5 328 aaKnown RBP6.32□□□□□ -1.4
USP4-207ENST00000462673 MISP3Q96FF7 219 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 CYYR1Q96J86 154 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 SMIM7Q9BQ49 75 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 PYGO2Q9BRQ0 406 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 ABHD14AQ9BUJ0 271 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 MAP1LC3BQ9GZQ8 125 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 DPM3Q9P2X0 92 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 GNG12Q9UBI6 72 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 CELSR1Q9NYQ6 3014 aa6.32□□□□□ -1.4
USP4-207ENST00000462673 AKAP9Q99996 3911 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 IGHV2-26A0A0B4J1V2 119 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 CEBPZOSA8MTT3 80 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 J3QR06 171 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 M0QZK8 103 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 F2RL2O00254 374 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 GGCTO75223 188 aaKnown RBP6.31□□□□□ -1.4
USP4-207ENST00000462673 CST7O76096 145 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 NAPSAO96009 420 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 IGHV4-38-2P0DP08 117 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 HOXB4P17483 251 aaPredicted RBP6.31□□□□□ -1.4
USP4-207ENST00000462673 COX7A1P24310 79 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 SAA4P35542 130 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 RAB7AP51149 207 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 DLX6P56179 175 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 RPL15P61313 204 aaKnown RBP6.31□□□□□ -1.4
USP4-207ENST00000462673 HBG1P69891 147 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 HBG2P69892 147 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 PMS2P11Q13670 270 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 C17orf58Q2M2W7 97 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 KLF17Q5JT82 389 aaPredicted RBP6.31□□□□□ -1.4
USP4-207ENST00000462673 ACTL10Q5JWF8 245 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 KCNIP4Q6PIL6 250 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 BRD3OSQ6XYD6 125 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 Q6YL49 198 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 OR10J5Q8NHC4 309 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 RFESDQ8TAC1 157 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 IL1F10Q8WWZ1 152 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 TMEM158Q8WZ71 300 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 DYRK2Q92630 601 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 ANAPC16Q96DE5 110 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 MAGT1Q9H0U3 335 aa6.31□□□□□ -1.4
USP4-207ENST00000462673 MEGF9Q9H1U4 602 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms