RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 OR6F1Q8NGZ6 308 aa11.43□□□□□ -0.58
SKA3-204ENST00000462482 OR5B3Q8NH48 314 aa11.43□□□□□ -0.58
SKA3-204ENST00000462482 SCARB1Q8WTV0 552 aa11.43□□□□□ -0.58
SKA3-204ENST00000462482 MOB3AQ96BX8 217 aa11.43□□□□□ -0.58
SKA3-204ENST00000462482 RNF183Q96D59 192 aa11.43□□□□□ -0.58
SKA3-204ENST00000462482 CMTM3Q96MX0 182 aa11.43□□□□□ -0.58
SKA3-204ENST00000462482 RNF167Q9H6Y7 350 aa11.43□□□□□ -0.58
SKA3-204ENST00000462482 NDUFA4L2Q9NRX3 87 aa11.43□□□□□ -0.58
SKA3-204ENST00000462482 GPR31O00270 319 aa11.42□□□□□ -0.58
SKA3-204ENST00000462482 ZNF207O43670 478 aaKnown RBP11.42□□□□□ -0.58
SKA3-204ENST00000462482 PMP2P02689 132 aa11.42□□□□□ -0.58
SKA3-204ENST00000462482 CTSDP07339 412 aaPredicted RBP11.42□□□□□ -0.58
SKA3-204ENST00000462482 G6PCP35575 357 aa11.42□□□□□ -0.58
SKA3-204ENST00000462482 RFX2P48378 723 aa11.42□□□□□ -0.58
SKA3-204ENST00000462482 NEDD8Q15843 81 aa11.42□□□□□ -0.58
SKA3-204ENST00000462482 ODF3L2Q3SX64 289 aa11.42□□□□□ -0.58
SKA3-204ENST00000462482 UBE2NLQ5JXB2 153 aa11.42□□□□□ -0.58
SKA3-204ENST00000462482 TMEM69Q5SWH9 247 aa11.42□□□□□ -0.58
SKA3-204ENST00000462482 CADM3Q8N126 398 aa11.42□□□□□ -0.58
SKA3-204ENST00000462482 FCAMRQ8WWV6 532 aa11.42□□□□□ -0.58
SKA3-204ENST00000462482 CHRDL1Q9BU40 450 aa11.42□□□□□ -0.58
SKA3-204ENST00000462482 NSG2Q9Y328 171 aa11.42□□□□□ -0.58
SKA3-204ENST00000462482 IGHV3OR16-8A0A075B7F1 116 aa11.41□□□□□ -0.58
SKA3-204ENST00000462482 LPCAT3Q6P1A2 487 aa11.41□□□□□ -0.58
SKA3-204ENST00000462482 SMPXQ9UHP9 88 aa11.41□□□□□ -0.58
SKA3-204ENST00000462482 K7EIM0 57 aa11.4□□□□□ -0.58
SKA3-204ENST00000462482 EIF4EP06730 217 aaKnown RBP11.4□□□□□ -0.58
SKA3-204ENST00000462482 PRSS3P35030 304 aa11.4□□□□□ -0.58
SKA3-204ENST00000462482 MFAP4P55083 255 aa11.4□□□□□ -0.58
SKA3-204ENST00000462482 TSPAN5P62079 268 aa11.4□□□□□ -0.58
SKA3-204ENST00000462482 PAFAH1B2P68402 229 aa11.4□□□□□ -0.58
SKA3-204ENST00000462482 SAMD12Q8N8I0 201 aa11.4□□□□□ -0.58
SKA3-204ENST00000462482 TMEM116Q8NCL8 245 aa11.4□□□□□ -0.58
SKA3-204ENST00000462482 OR1P1Q8NH06 330 aa11.4□□□□□ -0.58
SKA3-204ENST00000462482 OR4A16Q8NH70 328 aa11.4□□□□□ -0.58
SKA3-204ENST00000462482 SLC25A46Q96AG3 418 aa11.4□□□□□ -0.58
SKA3-204ENST00000462482 MISP3Q96FF7 219 aa11.4□□□□□ -0.58
SKA3-204ENST00000462482 RHPN1-AS1Q9BWJ2 59 aa11.4□□□□□ -0.58
SKA3-204ENST00000462482 MAP6D1Q9H9H5 199 aa11.4□□□□□ -0.58
SKA3-204ENST00000462482 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
SKA3-204ENST00000462482 MPTX1A8MV57 137 aa11.39□□□□□ -0.59
SKA3-204ENST00000462482 ATP6V1G2O95670 118 aa11.39□□□□□ -0.59
SKA3-204ENST00000462482 ADMP35318 185 aa11.39□□□□□ -0.59
SKA3-204ENST00000462482 TFPI2P48307 235 aa11.39□□□□□ -0.59
SKA3-204ENST00000462482 MFAP2P55001 183 aa11.39□□□□□ -0.59
SKA3-204ENST00000462482 TAS2R20P59543 309 aa11.39□□□□□ -0.59
SKA3-204ENST00000462482 TXN2Q99757 166 aa11.39□□□□□ -0.59
SKA3-204ENST00000462482 CSTL1Q9H114 145 aa11.39□□□□□ -0.59
SKA3-204ENST00000462482 TRAV14DV4A0A0A6YYC5 116 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 SMIM31A0A1B0GVY4 71 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 C15orf61A6NNL5 157 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 CD5P06127 495 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 CTSGP08311 255 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 EWSR1Q01844 656 aaKnown RBP eCLIP11.38□□□□□ -0.59
SKA3-204ENST00000462482 PHLDA2Q53GA4 152 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 H2BFWTQ7Z2G1 175 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 APRG1Q8IVJ8 170 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 GATAD1Q8WUU5 269 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 RNF2Q99496 336 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 GINS3Q9BRX5 216 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 MFFQ9GZY8 342 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 VCX3AQ9NNX9 186 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 FAM212BQ9NTI7 297 aaPredicted RBP11.38□□□□□ -0.59
SKA3-204ENST00000462482 TMEM14BQ9NUH8 114 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 ANAPC10Q9UM13 185 aa11.38□□□□□ -0.59
SKA3-204ENST00000462482 IGKV3-7A0A075B6H7 116 aa11.37□□□□□ -0.59
SKA3-204ENST00000462482 CHEK1O14757 476 aa11.37□□□□□ -0.59
SKA3-204ENST00000462482 GNG7O60262 68 aa11.37□□□□□ -0.59
SKA3-204ENST00000462482 IFNA4P05014 189 aa11.37□□□□□ -0.59
SKA3-204ENST00000462482 NAT1P18440 290 aa11.37□□□□□ -0.59
SKA3-204ENST00000462482 HLA-DMAP28067 261 aa11.37□□□□□ -0.59
SKA3-204ENST00000462482 HRH1P35367 487 aa11.37□□□□□ -0.59
SKA3-204ENST00000462482 ERHP84090 104 aaKnown RBP11.37□□□□□ -0.59
SKA3-204ENST00000462482 PHLDA1Q8WV24 401 aaPredicted RBP11.37□□□□□ -0.59
SKA3-204ENST00000462482 RARRES2Q99969 163 aa11.37□□□□□ -0.59
SKA3-204ENST00000462482 FXYD6Q9H0Q3 95 aa11.37□□□□□ -0.59
SKA3-204ENST00000462482 ALMS1Q8TCU4 4167 aa11.37□□□□□ -0.59
SKA3-204ENST00000462482 IGHV3-49A0A0A0MS15 119 aa11.36□□□□□ -0.59
SKA3-204ENST00000462482 F8W735 103 aaPredicted RBP11.36□□□□□ -0.59
SKA3-204ENST00000462482 KCTD21Q4G0X4 260 aa11.36□□□□□ -0.59
SKA3-204ENST00000462482 PINX1Q96BK5 328 aaKnown RBP11.36□□□□□ -0.59
SKA3-204ENST00000462482 HYDINQ4G0P3 5121 aa11.35□□□□□ -0.59
SKA3-204ENST00000462482 DNASE2O00115 360 aaPredicted RBP11.35□□□□□ -0.59
SKA3-204ENST00000462482 MT-CO2P00403 227 aa11.35□□□□□ -0.59
SKA3-204ENST00000462482 FCGR2BP31994 310 aaPredicted RBP11.35□□□□□ -0.59
SKA3-204ENST00000462482 NPBWR1P48145 328 aa11.35□□□□□ -0.59
SKA3-204ENST00000462482 HSPE1P61604 102 aaKnown RBP11.35□□□□□ -0.59
SKA3-204ENST00000462482 TBC1D26Q86UD7 250 aa11.35□□□□□ -0.59
SKA3-204ENST00000462482 GBGT1Q8N5D6 347 aa11.35□□□□□ -0.59
SKA3-204ENST00000462482 DUSP18Q8NEJ0 188 aa11.35□□□□□ -0.59
SKA3-204ENST00000462482 OR10C1Q96KK4 312 aa11.35□□□□□ -0.59
SKA3-204ENST00000462482 NXF2Q9GZY0 626 aaKnown RBP11.35□□□□□ -0.59
SKA3-204ENST00000462482 DBX1A6NMT0 343 aa11.34□□□□□ -0.59
SKA3-204ENST00000462482 I3L2K1 104 aa11.34□□□□□ -0.59
SKA3-204ENST00000462482 ST8SIA3O43173 380 aa11.34□□□□□ -0.59
SKA3-204ENST00000462482 SCGB2A1O75556 95 aa11.34□□□□□ -0.59
SKA3-204ENST00000462482 SNCAP37840 140 aa11.34□□□□□ -0.59
SKA3-204ENST00000462482 RPS19P39019 145 aaKnown RBP11.34□□□□□ -0.59
SKA3-204ENST00000462482 RPL11P62913 178 aaKnown RBP11.34□□□□□ -0.59
SKA3-204ENST00000462482 PRCDQ00LT1 54 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms