RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 SLC25A6P12236 298 aa9.16□□□□□ -0.94
CPNE1-221ENST00000462352 DEFA4P12838 97 aa9.16□□□□□ -0.94
CPNE1-221ENST00000462352 HOXA1P49639 335 aaPredicted RBP9.16□□□□□ -0.94
CPNE1-221ENST00000462352 PDLIM3Q53GG5 364 aaPredicted RBP9.16□□□□□ -0.94
CPNE1-221ENST00000462352 MRPL41Q8IXM3 137 aaKnown RBP9.16□□□□□ -0.94
CPNE1-221ENST00000462352 OR2C3Q8N628 320 aa9.16□□□□□ -0.94
CPNE1-221ENST00000462352 UXS1Q8NBZ7 420 aa9.16□□□□□ -0.94
CPNE1-221ENST00000462352 OR1S1Q8NH92 325 aa9.16□□□□□ -0.94
CPNE1-221ENST00000462352 FANCD2OSQ96PS1 177 aa9.16□□□□□ -0.94
CPNE1-221ENST00000462352 GNB4Q9HAV0 340 aa9.16□□□□□ -0.94
CPNE1-221ENST00000462352 GPN1Q9HCN4 374 aaPredicted RBP9.16□□□□□ -0.94
CPNE1-221ENST00000462352 TRRAPQ9Y4A5 3859 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 IGLV11-55A0A075B6I3 123 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 A0A0G2JLM5 398 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 MPTX1A8MV57 137 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 INS-IGF2F8WCM5 200 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 OR2J3O76001 311 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 TSPAN15O95858 294 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 IGHV3-11P01762 117 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 HIST1H1BP16401 226 aaKnown RBP9.15□□□□□ -0.94
CPNE1-221ENST00000462352 ERHP84090 104 aaKnown RBP9.15□□□□□ -0.94
CPNE1-221ENST00000462352 RHOGP84095 191 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 TNFRSF9Q07011 255 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 RGS21Q2M5E4 152 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 KLK9Q2XQG4 91 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 C8orf86Q6ZUL3 223 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 C4orf3Q8WVX3 66 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 OR5B12Q96R08 314 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 P2RX4Q99571 388 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 ENY2Q9NPA8 101 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 HSPB7Q9UBY9 170 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 CACFD1Q9UGQ2 172 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 KLK9Q9UKQ9 250 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 DMRT1Q9Y5R6 373 aa9.15□□□□□ -0.94
CPNE1-221ENST00000462352 F11RQ9Y624 299 aaKnown RBP9.15□□□□□ -0.94
CPNE1-221ENST00000462352 C13orf42A0A1B0GVH6 325 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 FAM223BA6NKX1 122 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 CEBPZOSA8MTT3 80 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 SNRPGP15A8MWD9 76 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 I3L521 148 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 CCSO14618 274 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 NDUFB8O95169 186 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 LGALS1P09382 135 aaKnown RBP9.14□□□□□ -0.95
CPNE1-221ENST00000462352 MFAP2P55001 183 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 FAM223AQ8IWN6 122 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 ZNF114Q8NC26 417 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 NECAP1Q8NC96 275 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 OR4F17Q8NGA8 305 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 USMG5Q96IX5 58 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 OR10C1Q96KK4 312 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 OR4F4Q96R69 305 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 FBXL7Q9UJT9 491 aa9.14□□□□□ -0.95
CPNE1-221ENST00000462352 FAM90A26D6RGX4 464 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 CYB5BO43169 146 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 SNCAP37840 140 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 RUNX1Q01196 453 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 ATP5G2Q06055 141 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 IAH1Q2TAA2 248 aaPredicted RBP9.13□□□□□ -0.95
CPNE1-221ENST00000462352 DEFB136Q30KP8 78 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 C15orf32Q32M92 178 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 C11orf87Q6NUJ2 197 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 SLC25A24Q6NUK1 477 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 ETV3LQ6ZN32 361 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 OR1L6Q8NGR2 347 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 OR1P1Q8NH06 330 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 DTD1Q8TEA8 209 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 RBKSQ9H477 322 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 HEYLQ9NQ87 328 aaPredicted RBP9.13□□□□□ -0.95
CPNE1-221ENST00000462352 VWFP04275 2813 aa9.13□□□□□ -0.95
CPNE1-221ENST00000462352 FAM25EA8MYX2 175 aa9.12□□□□□ -0.95
CPNE1-221ENST00000462352 RNASE2P10153 161 aaKnown RBP9.12□□□□□ -0.95
CPNE1-221ENST00000462352 EXOSC2Q13868 293 aaKnown RBP9.12□□□□□ -0.95
CPNE1-221ENST00000462352 OXA1LQ15070 435 aa9.12□□□□□ -0.95
CPNE1-221ENST00000462352 TATDN3Q17R31 274 aa9.12□□□□□ -0.95
CPNE1-221ENST00000462352 BSXQ3C1V8 233 aa9.12□□□□□ -0.95
CPNE1-221ENST00000462352 ZBTB8BQ8NAP8 495 aaPredicted RBP9.12□□□□□ -0.95
CPNE1-221ENST00000462352 OR11H1Q8NG94 326 aa9.12□□□□□ -0.95
CPNE1-221ENST00000462352 OR4D5Q8NGN0 318 aa9.12□□□□□ -0.95
CPNE1-221ENST00000462352 RAX2Q96IS3 184 aa9.12□□□□□ -0.95
CPNE1-221ENST00000462352 DUX3Q96PT4 197 aa9.12□□□□□ -0.95
CPNE1-221ENST00000462352 HIPK2Q9H2X6 1198 aa9.12□□□□□ -0.95
CPNE1-221ENST00000462352 THYN1Q9P016 225 aa9.12□□□□□ -0.95
CPNE1-221ENST00000462352 C7orf66A4D0T2 115 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 ANKRD34BA5PLL1 514 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 C5orf51A6NDU8 294 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 MFSD2BA6NFX1 497 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 CCL24O00175 119 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 SYNGR2O43760 224 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 PF4P02776 101 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 MYCNOSP40205 109 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 HTR2BP41595 481 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 NKX2-1P43699 371 aaPredicted RBP9.11□□□□□ -0.95
CPNE1-221ENST00000462352 SUB1P53999 127 aaKnown RBP eCLIP9.11□□□□□ -0.951e-12■■■■□ 22.8
CPNE1-221ENST00000462352 PRR31Q5SQ13 230 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 ZNF343Q6P1L6 599 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 OR1N2Q8NGR9 330 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 CXorf58Q96LI9 332 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 MAGT1Q9H0U3 335 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 GSKIPQ9P0R6 139 aa9.11□□□□□ -0.95
CPNE1-221ENST00000462352 S4R3C0 116 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms