RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 KPRPQ5T749 579 aaPredicted RBP4.43□□□□□ -1.7
VPS36-202ENST00000462289 CTRB2Q6GPI1 263 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 ZNF329Q86UD4 541 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 SLC25A42Q86VD7 318 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 FAM219AQ8IW50 185 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 VKORC1L1Q8N0U8 176 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 ZNF491Q8N8L2 437 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 ZNF114Q8NC26 417 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 OR4X2Q8NGF9 303 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 OR5B3Q8NH48 314 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 FAM110DQ8TAY7 271 aaPredicted RBP4.43□□□□□ -1.7
VPS36-202ENST00000462289 C4orf3Q8WVX3 66 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 LSM10Q969L4 123 aaKnown RBP4.43□□□□□ -1.7
VPS36-202ENST00000462289 R3HDM4Q96D70 268 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 ZNF414Q96IQ9 312 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 SCGB3A2Q96PL1 93 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 ATP6V0BQ99437 205 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 SLA2Q9H6Q3 261 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 NAA60Q9H7X0 242 aa4.43□□□□□ -1.7
VPS36-202ENST00000462289 FOXA2Q9Y261 457 aaPredicted RBP4.43□□□□□ -1.7
VPS36-202ENST00000462289 TSSC4Q9Y5U2 329 aaPredicted RBP4.43□□□□□ -1.7
VPS36-202ENST00000462289 IGLV11-55A0A075B6I3 123 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 A0A0B4J2A0 478 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 A0A0G2JRQ6 117 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 TEX13DA0A0J9YY54 714 aaPredicted RBP4.42□□□□□ -1.7
VPS36-202ENST00000462289 DUXBA0A1W2PPF3 345 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
VPS36-202ENST00000462289 OR5AC1P0C628 307 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 OR9G9P0C7N8 305 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 SLC25A6P12236 298 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 S100GP29377 79 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 FCGR2BP31994 310 aaPredicted RBP4.42□□□□□ -1.7
VPS36-202ENST00000462289 LPAR6P43657 344 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 RAB9AP51151 201 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 SLC35B1P78383 322 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 WT1-ASQ06250 92 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 TMEM267Q0VDI3 215 aaPredicted RBP4.42□□□□□ -1.7
VPS36-202ENST00000462289 C2orf68Q2NKX9 166 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 SCGB2B2Q4G0G5 96 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 OR2B11Q5JQS5 317 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 C10orf55Q5SWW7 151 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 HSD17B13Q7Z5P4 300 aaPredicted RBP4.42□□□□□ -1.7
VPS36-202ENST00000462289 CENPVQ7Z7K6 275 aaPredicted RBP4.42□□□□□ -1.7
VPS36-202ENST00000462289 SELENOHQ8IZQ5 122 aaKnown RBP4.42□□□□□ -1.7
VPS36-202ENST00000462289 CCDC71LQ8N9Z2 235 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 POC5Q8NA72 575 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 DUSP18Q8NEJ0 188 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 LFNGQ8NES3 379 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 OR52E5Q8NH55 327 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 RBPMSQ93062 196 aaKnown RBP4.42□□□□□ -1.7
VPS36-202ENST00000462289 TSC22D3Q99576 134 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 SPIN2AQ99865 258 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 SPIN2BQ9BPZ2 258 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 WDR12Q9GZL7 423 aaKnown RBP4.42□□□□□ -1.7
VPS36-202ENST00000462289 PARP11Q9NR21 331 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 SHPKQ9UHJ6 478 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 LINC00527Q9UJ94 153 aa4.42□□□□□ -1.7
VPS36-202ENST00000462289 TRGV11A0A075B6L2 103 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 TEX50A0A1B0GTY4 177 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 MSGN1A6NI15 193 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 M0QZ24 198 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 LYRM1O43325 122 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 PEX14O75381 377 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 KRASP01116 189 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 AREGP15514 252 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 VDAC1P21796 283 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 PSMB6P28072 239 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 G6PCP35575 357 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 RPL27AP46776 148 aaKnown RBP4.41□□□□□ -1.7
VPS36-202ENST00000462289 MFAP2P55001 183 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 SRPXP78539 464 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 PRCDQ00LT1 54 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 ZNF846Q147U1 533 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 CXorf66Q5JRM2 361 aaPredicted RBP4.41□□□□□ -1.7
VPS36-202ENST00000462289 ZNF343Q6P1L6 599 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 C18orf65Q6ZTR6 163 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 ZNF695Q8IW36 515 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 OR1L8Q8NGR8 309 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 SCARB1Q8WTV0 552 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 FYTTD1Q96QD9 318 aaKnown RBP4.41□□□□□ -1.7
VPS36-202ENST00000462289 FAM103A1Q9BTL3 118 aaKnown RBP4.41□□□□□ -1.7
VPS36-202ENST00000462289 QTRT1Q9BXR0 403 aaKnown RBP4.41□□□□□ -1.7
VPS36-202ENST00000462289 FKBP11Q9NYL4 201 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 COPZ2Q9P299 210 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 PRNDQ9UKY0 176 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 C14orf166Q9Y224 244 aaKnown RBP4.41□□□□□ -1.7
VPS36-202ENST00000462289 WSB1Q9Y6I7 421 aa4.41□□□□□ -1.7
VPS36-202ENST00000462289 PIGBOS1A0A0B4J2F0 54 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 A0A1W2PN81 502 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 TCRBV4S1A1TA0A5B7 111 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 FAM223BA6NKX1 122 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 SFT2D2O95562 160 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 DUS4LO95620 317 aaKnown RBP4.4□□□□□ -1.71
VPS36-202ENST00000462289 HLA-AP01891 365 aaKnown RBP4.4□□□□□ -1.71
VPS36-202ENST00000462289 TCRBP04435 133 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 SERPINE2P07093 398 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 LGALS1P09382 135 aaKnown RBP4.4□□□□□ -1.71
VPS36-202ENST00000462289 MYOD1P15172 320 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 PGAM2P15259 253 aa4.4□□□□□ -1.71
VPS36-202ENST00000462289 CHRNA7P36544 502 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms