RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 MMD2Q8IY49 270 aa12.24□□□□□ -0.45
SF3A3-203ENST00000461869 QTRT1Q9BXR0 403 aaKnown RBP12.24□□□□□ -0.45
SF3A3-203ENST00000461869 SLC25A31Q9H0C2 315 aa12.24□□□□□ -0.45
SF3A3-203ENST00000461869 MAGT1Q9H0U3 335 aa12.24□□□□□ -0.45
SF3A3-203ENST00000461869 ZC4H2Q9NQZ6 224 aa12.24□□□□□ -0.45
SF3A3-203ENST00000461869 RYR3Q15413 4870 aa12.24□□□□□ -0.45
SF3A3-203ENST00000461869 WI2-2373I1.2A0A1W2PRP0 233 aa12.23□□□□□ -0.45
SF3A3-203ENST00000461869 CEBPZOSA8MTT3 80 aa12.23□□□□□ -0.45
SF3A3-203ENST00000461869 NBR2O15453 112 aa12.23□□□□□ -0.45
SF3A3-203ENST00000461869 TSC22D2O75157 780 aa12.23□□□□□ -0.45
SF3A3-203ENST00000461869 MAS1LP35410 378 aa12.23□□□□□ -0.45
SF3A3-203ENST00000461869 KRTAP10-11P60412 298 aa12.23□□□□□ -0.45
SF3A3-203ENST00000461869 HSPE1P61604 102 aaKnown RBP12.23□□□□□ -0.45
SF3A3-203ENST00000461869 PSG5Q15238 335 aa12.23□□□□□ -0.45
SF3A3-203ENST00000461869 MMDQ15546 238 aa12.23□□□□□ -0.45
SF3A3-203ENST00000461869 CENPVQ7Z7K6 275 aaPredicted RBP12.23□□□□□ -0.45
SF3A3-203ENST00000461869 MRPL41Q8IXM3 137 aaKnown RBP12.23□□□□□ -0.45
SF3A3-203ENST00000461869 KCNRGQ8N5I3 272 aa12.23□□□□□ -0.45
SF3A3-203ENST00000461869 DTD1Q8TEA8 209 aa12.23□□□□□ -0.45
SF3A3-203ENST00000461869 RCC1LQ96I51 464 aaKnown RBP12.23□□□□□ -0.45
SF3A3-203ENST00000461869 EAF1Q96JC9 268 aaPredicted RBP12.23□□□□□ -0.45
SF3A3-203ENST00000461869 COMMD5Q9GZQ3 224 aa12.23□□□□□ -0.45
SF3A3-203ENST00000461869 RBKSQ9H477 322 aa12.23□□□□□ -0.45
SF3A3-203ENST00000461869 C11orf1Q9H5F2 150 aa12.23□□□□□ -0.45
SF3A3-203ENST00000461869 LYRM2Q9NU23 88 aaPredicted RBP12.23□□□□□ -0.45
SF3A3-203ENST00000461869 OR51B2Q9Y5P1 312 aa12.23□□□□□ -0.45
SF3A3-203ENST00000461869 TRAV3A0A0B4J244 114 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 TCRBV4S1A1TA0A5B7 111 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 RNF222A6NCQ9 220 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 RRHO14718 337 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 ACTL6BO94805 426 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 NDUFA3O95167 84 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 TMEM11P17152 192 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 RPL12P30050 165 aaKnown RBP12.22□□□□□ -0.45
SF3A3-203ENST00000461869 S100A11P31949 105 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 CAV2P51636 162 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 RPP30P78346 268 aaKnown RBP12.22□□□□□ -0.45
SF3A3-203ENST00000461869 BAXQ07812 192 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 PLGLAQ15195 96 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 LGALSLQ3ZCW2 172 aaPredicted RBP12.22□□□□□ -0.45
SF3A3-203ENST00000461869 LAMTOR1Q6IAA8 161 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 OR2C3Q8N628 320 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 NPBQ8NG41 125 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 SMIM8Q96KF7 97 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 WWC2-AS2Q96NR7 200 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 ARL6Q9H0F7 186 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 HIPK2Q9H2X6 1198 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 ENY2Q9NPA8 101 aa12.22□□□□□ -0.45
SF3A3-203ENST00000461869 METTL1Q9UBP6 276 aaKnown RBP12.22□□□□□ -0.45
SF3A3-203ENST00000461869 TSSC4Q9Y5U2 329 aaPredicted RBP12.22□□□□□ -0.45
SF3A3-203ENST00000461869 NBEAL2Q6ZNJ1 2754 aa12.21□□□□□ -0.45
SF3A3-203ENST00000461869 KANTRA0A1W2PQU2 76 aa12.21□□□□□ -0.45
SF3A3-203ENST00000461869 CXCL2P19875 107 aa12.21□□□□□ -0.45
SF3A3-203ENST00000461869 HOXA1P49639 335 aaPredicted RBP12.21□□□□□ -0.45
SF3A3-203ENST00000461869 PRCDQ00LT1 54 aa12.21□□□□□ -0.45
SF3A3-203ENST00000461869 CD69Q07108 199 aa12.21□□□□□ -0.45
SF3A3-203ENST00000461869 TCTEX1D4Q5JR98 221 aa12.21□□□□□ -0.45
SF3A3-203ENST00000461869 PPP1R27Q86WC6 154 aa12.21□□□□□ -0.45
SF3A3-203ENST00000461869 STX12Q86Y82 276 aa12.21□□□□□ -0.45
SF3A3-203ENST00000461869 Q8N6K4 173 aa12.21□□□□□ -0.45
SF3A3-203ENST00000461869 OR1L8Q8NGR8 309 aa12.21□□□□□ -0.45
SF3A3-203ENST00000461869 PLEKHA3Q9HB20 300 aa12.21□□□□□ -0.45
SF3A3-203ENST00000461869 PSENENQ9NZ42 101 aa12.21□□□□□ -0.45
SF3A3-203ENST00000461869 A0A1W2PN81 502 aa12.2□□□□□ -0.46
SF3A3-203ENST00000461869 CRYGBP07316 175 aa12.2□□□□□ -0.46
SF3A3-203ENST00000461869 IAPPP10997 89 aa12.2□□□□□ -0.46
SF3A3-203ENST00000461869 CHRNA7P36544 502 aa12.2□□□□□ -0.46
SF3A3-203ENST00000461869 AP2S1P53680 142 aaPredicted RBP12.2□□□□□ -0.46
SF3A3-203ENST00000461869 F2RL1P55085 397 aa12.2□□□□□ -0.46
SF3A3-203ENST00000461869 PRSS8Q16651 343 aa12.2□□□□□ -0.46
SF3A3-203ENST00000461869 TMUB2Q71RG4 321 aa12.2□□□□□ -0.46
SF3A3-203ENST00000461869 ZNF430Q9H8G1 570 aaPredicted RBP12.2□□□□□ -0.46
SF3A3-203ENST00000461869 TAAR5O14804 337 aa12.19□□□□□ -0.46
SF3A3-203ENST00000461869 BCL2L11O43521 198 aa12.19□□□□□ -0.46
SF3A3-203ENST00000461869 HOXD3P31249 432 aaPredicted RBP12.19□□□□□ -0.46
SF3A3-203ENST00000461869 C5orf64Q2M2E5 130 aa12.19□□□□□ -0.46
SF3A3-203ENST00000461869 RITA1Q96K30 269 aa12.19□□□□□ -0.46
SF3A3-203ENST00000461869 ARPC5LQ9BPX5 153 aa12.19□□□□□ -0.46
SF3A3-203ENST00000461869 FBXL15Q9H469 300 aa12.19□□□□□ -0.46
SF3A3-203ENST00000461869 HEYLQ9NQ87 328 aaPredicted RBP12.19□□□□□ -0.46
SF3A3-203ENST00000461869 STRAPQ9Y3F4 350 aaKnown RBP12.19□□□□□ -0.46
SF3A3-203ENST00000461869 TEX50A0A1B0GTY4 177 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 MSGN1A6NI15 193 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 INS-IGF2F8WCM5 200 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 CNTFRP26992 372 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 PAX9P55771 341 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 ATP5IP56385 69 aaPredicted RBP12.18□□□□□ -0.46
SF3A3-203ENST00000461869 HBG1P69891 147 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 HBG2P69892 147 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 EWSR1Q01844 656 aaKnown RBP eCLIP12.18□□□□□ -0.46
SF3A3-203ENST00000461869 EGFEM1PQ0D2K5 195 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 HNF4GQ14541 408 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 OPCMLQ14982 345 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 KHDC1LQ5JSQ8 128 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 HSD17B13Q7Z5P4 300 aaPredicted RBP12.18□□□□□ -0.46
SF3A3-203ENST00000461869 TMEM252Q8N6L7 170 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 OR4X2Q8NGF9 303 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 B9D2Q9BPU9 175 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 HINT2Q9BX68 163 aa12.18□□□□□ -0.46
SF3A3-203ENST00000461869 GON7Q9BXV9 100 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms