RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 TLNRD1Q9H1K6 362 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 ENY2Q9NPA8 101 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 C14orf105Q9NVL8 296 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 CMTM6Q9NX76 183 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 UTP11Q9Y3A2 253 aaKnown RBP1.25□□□□□ -2.21
HDAC6-212ENST00000461608 ARHGEF11O15085 1522 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 ADGRB3O60242 1522 aa1.25□□□□□ -2.21
HDAC6-212ENST00000461608 NYNRINQ9P2P1 1898 aaKnown RBP1.24□□□□□ -2.21
HDAC6-212ENST00000461608 ICE1Q9Y2F5 2266 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 PRDM2Q13029 1718 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 MPDZO75970 2070 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 TRBV20OR9-2A0A075B6H5 130 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 TRAV7A0A075B6U4 112 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 TMSB15BA0A087X1C1 80 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 TRAV38-1A0A0B4J264 116 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 IGHV1-18A0A0C4DH31 117 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 FAM236DA0A1B0GTK5 79 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 PQLC2LA1A4F0 135 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 OR4C46A6NHA9 309 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 I3L521 148 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 OVOL1O14753 267 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 LEPROTO15243 131 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 HAND1O96004 215 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 IFNA21P01568 189 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 PRM2P04554 102 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 SERPINA7P05543 415 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 FAM236CP0DP71 79 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 PEBP1P30086 187 aaKnown RBP1.24□□□□□ -2.21
HDAC6-212ENST00000461608 PSMD8P48556 350 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 FXYD2P54710 66 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 DEFA3P59666 94 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 EDDM3AQ14507 147 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 CDK10Q15131 360 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 ZNF791Q3KP31 576 aaPredicted RBP1.24□□□□□ -2.21
HDAC6-212ENST00000461608 PCOTHQ58A44 107 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 TMEM97Q5BJF2 176 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 IBA57Q5T440 356 aaKnown RBP1.24□□□□□ -2.21
HDAC6-212ENST00000461608 C3orf33Q6P1S2 294 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 ALKAL1Q6UXT8 129 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 RNASE11Q8TAA1 199 aaKnown RBP1.24□□□□□ -2.21
HDAC6-212ENST00000461608 PYDC1Q8WXC3 89 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 ERMAPQ96PL5 475 aaPredicted RBP1.24□□□□□ -2.21
HDAC6-212ENST00000461608 IMMP2LQ96T52 175 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 TIMM21Q9BVV7 248 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 KIFC1Q9BW19 673 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 TTTY13Q9BZ97 58 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 ULBP3Q9BZM4 244 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 COMMD5Q9GZQ3 224 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 DCSTAMPQ9H295 470 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 PRTFDC1Q9NRG1 225 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 C19orf12Q9NSK7 152 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 UQCC1Q9NVA1 299 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 OPTCQ9UBM4 332 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 SS18L2Q9UHA2 77 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 NDUFAF1Q9Y375 327 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 UFC1Q9Y3C8 167 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 KDM5BQ9UGL1 1544 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 SNAPC4Q5SXM2 1469 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 CEP164Q9UPV0 1460 aa1.24□□□□□ -2.21
HDAC6-212ENST00000461608 CHD1O14646 1710 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 COL4A2P08572 1712 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 PLXNA3P51805 1871 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 A0A1B0GV72 72 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 PCNX2A6NKB5 2137 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 RFPL4AA6NLU0 287 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 SIGLEC16A6NMB1 481 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 FABP5P3A8MUU1 101 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 ZNF705FA8MVS1 300 aaPredicted RBP1.23□□□□□ -2.21
HDAC6-212ENST00000461608 RFPL4AL1F8VTS6 287 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 INMT-MINDY4F8WBC2 141 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 SLC22A1O15245 554 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 HLA-DRB1P01911 266 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 TTRP02766 147 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 LGALS1P09382 135 aaKnown RBP1.23□□□□□ -2.21
HDAC6-212ENST00000461608 TFPTP0C1Z6 253 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 SULT1A3P0DMM9 295 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 SULT1A4P0DMN0 295 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 CCL5P13501 91 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 HIST1H1TP22492 207 aaPredicted RBP1.23□□□□□ -2.21
HDAC6-212ENST00000461608 RPL28P46779 137 aaKnown RBP1.23□□□□□ -2.21
HDAC6-212ENST00000461608 EVX1P49640 407 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 KCNJ8Q15842 424 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 NDUFA5Q16718 116 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 KRTAP13-4Q3LI77 160 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 LIN52Q52LA3 116 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 LPCAT3Q6P1A2 487 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 RPL22L1Q6P5R6 122 aaKnown RBP1.23□□□□□ -2.21
HDAC6-212ENST00000461608 TMEM86AQ8N2M4 240 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 ZNF676Q8N7Q3 588 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 OR10K1Q8NGX5 313 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 OR10J5Q8NHC4 309 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 GRPEL2Q8TAA5 225 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 BORCS7Q96B45 105 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 CMSS1Q9BQ75 279 aaKnown RBP1.23□□□□□ -2.21
HDAC6-212ENST00000461608 NMNAT1Q9HAN9 279 aaPredicted RBP1.23□□□□□ -2.21
HDAC6-212ENST00000461608 ARMC1Q9NVT9 282 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 IDI2-AS1Q9NZ38 188 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 IL36BQ9NZH7 164 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 DOK5Q9P104 306 aa1.23□□□□□ -2.21
HDAC6-212ENST00000461608 FUT9Q9Y231 359 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms