RNA–Protein interactions for RNA: ENST00000461520.5

USP54-208, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best)

Gene USP54, Length 1,212 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-208ENST00000461520 PLECQ15149 4684 aaKnown RBP5.45□□□□□ -1.54
USP54-208ENST00000461520 HMX3A6NHT5 357 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 E7EUB6 86 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 RBFOX2O43251 390 aaKnown RBP eCLIP5.45□□□□□ -1.54
USP54-208ENST00000461520 HIST1H1BP16401 226 aaKnown RBP5.45□□□□□ -1.54
USP54-208ENST00000461520 PSMB6P28072 239 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 SDC2P34741 201 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 BRWD1-AS2P59051 145 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 ARPC4P59998 168 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 CD81P60033 236 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 RPL8P62917 257 aaKnown RBP5.45□□□□□ -1.54
USP54-208ENST00000461520 DEFB114Q30KQ6 69 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 ADAMTSL5Q6ZMM2 481 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 HOGA1Q86XE5 327 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 GPHB5Q86YW7 130 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 BEST4Q8NFU0 473 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 OR4A5Q8NH83 315 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 DYNLRB2Q8TF09 96 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 NEURL2Q9BR09 285 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 ZC4H2Q9NQZ6 224 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 BET1LQ9NYM9 111 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 TAS2R8Q9NYW2 309 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 TECRQ9NZ01 308 aaKnown RBP5.45□□□□□ -1.54
USP54-208ENST00000461520 CEPT1Q9Y6K0 416 aa5.45□□□□□ -1.54
USP54-208ENST00000461520 TRAV18A0A075B6X5 111 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 C2orf70A6NJV1 201 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 PPP5D1E7EU14 171 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 TPPPO94811 219 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 OR2C1O95371 312 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 ATP6V1G2O95670 118 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 HPRT1P00492 218 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 PPYP01298 95 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 FOLR2P14207 255 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 CTRB1P17538 263 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 FCGR2CP31995 323 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 ARL3P36405 182 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 TAS2R31P59538 309 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 MXD1Q05195 221 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 CATR1Q13166 79 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 TIMM50Q3ZCQ8 353 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 FAM106AQ4KMX7 169 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 CTRB2Q6GPI1 263 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 OR4A47Q6IF82 309 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 ZNF773Q6PK81 442 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 SSX9Q7RTT3 188 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 SPAG16Q8N0X2 631 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 TMEM217Q8N7C4 229 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 GVQW1Q8N7I0 195 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 OR13F1Q8NGS4 319 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 SECTM1Q8WVN6 248 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 EEF1AKMT3Q96AZ1 226 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 SLC25A38Q96DW6 304 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 CXorf58Q96LI9 332 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 PLEKHA3Q9HB20 300 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 DIABLOQ9NR28 239 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 CCL28Q9NRJ3 127 aa5.44□□□□□ -1.54
USP54-208ENST00000461520 IGLV11-55A0A075B6I3 123 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 TRBV7-1A0A0A6YYK4 115 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 A0A1B0GW64 132 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 A8MWP6 167 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 OR11H12B2RN74 326 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 TNFSF12O43508 249 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 HLA-AP01891 365 aaKnown RBP5.43□□□□□ -1.54
USP54-208ENST00000461520 CD7P09564 240 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 DEFA4P12838 97 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 AREGP15514 252 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 NQO2P16083 231 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 HLA-GP17693 338 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 CBLN1P23435 193 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 TNFSF8P32971 234 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 CBX5P45973 191 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 POU2AF1Q16633 256 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 IDNKQ5T6J7 187 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 CLEC19AQ6UXS0 136 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 C19orf35Q6ZS72 473 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 SLC16A13Q7RTY0 426 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 CADM3Q8N126 398 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 DEFB125Q8N687 156 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 OR5AP2Q8NGF4 316 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 OR5H6Q8NGV6 325 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 CD300LFQ8TDQ1 290 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 GIMAP1Q8WWP7 306 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 BORCS5Q969J3 196 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 SRSF8Q9BRL6 282 aaKnown RBP5.43□□□□□ -1.54
USP54-208ENST00000461520 SLC5A7Q9GZV3 580 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 RNF167Q9H6Y7 350 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 AUNIPQ9H7T9 357 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 HRASLSQ9HDD0 168 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 THYN1Q9P016 225 aa5.43□□□□□ -1.54
USP54-208ENST00000461520 LOC100506127A0A0U1RQW1 187 aa5.42□□□□□ -1.54
USP54-208ENST00000461520 ZNF320A2RRD8 509 aa5.42□□□□□ -1.54
USP54-208ENST00000461520 TMEM213A2RRL7 107 aa5.42□□□□□ -1.54
USP54-208ENST00000461520 RBMY1BA6NDE4 496 aaKnown RBP5.42□□□□□ -1.54
USP54-208ENST00000461520 RBMY1EA6NEQ0 496 aaKnown RBP5.42□□□□□ -1.54
USP54-208ENST00000461520 SULT1C2O00338 296 aa5.42□□□□□ -1.54
USP54-208ENST00000461520 UPK2O00526 184 aa5.42□□□□□ -1.54
USP54-208ENST00000461520 CYB5BO43169 146 aa5.42□□□□□ -1.54
USP54-208ENST00000461520 XRCC3O43542 346 aa5.42□□□□□ -1.54
USP54-208ENST00000461520 IGHV3-23P01764 117 aa5.42□□□□□ -1.54
USP54-208ENST00000461520 REG1AP05451 166 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms