RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 TRAPPC2BP0DI82 140 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 C8orf88P0DMB2 117 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 OR13C7P0DN81 318 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 F2RP25116 425 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 S100GP29377 79 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 GNRHRP30968 328 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 KCTD21Q4G0X4 260 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 ZNF585BQ52M93 769 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 TM4SF20Q53R12 229 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 UBE2NLQ5JXB2 153 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 TMEM69Q5SWH9 247 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 DHRS11Q6UWP2 260 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 UNQ9165/PRO28630Q6UXU0 137 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 SLC38A6Q8IZM9 456 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 CADM3Q8N126 398 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 TSPAN14Q8NG11 270 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 TMEM190Q8WZ59 177 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 LSM10Q969L4 123 aaKnown RBP6.5□□□□□ -1.37
HDAC9-220ENST00000461409 MOB3AQ96BX8 217 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 BSCL2Q96G97 398 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-220ENST00000461409 ATP6V0BQ99437 205 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 SPAG8Q99932 426 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-220ENST00000461409 ZNF436Q9C0F3 470 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-220ENST00000461409 C5orf66Q9H5L9 145 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 DAZ1Q9NQZ3 744 aaKnown RBP6.5□□□□□ -1.37
HDAC9-220ENST00000461409 TRAV3A0A0B4J244 114 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 IGHV3-35A0A0C4DH35 117 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 MEIS3P1A6NDR6 274 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 OR2T8A6NH00 312 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 TGOLN2O43493 480 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 PGLYRP1O75594 196 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-220ENST00000461409 SNAPC5O75971 98 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 RLN1P04808 185 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 APOC4P55056 127 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 LAMTOR1Q6IAA8 161 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 SLC25A24Q6NUK1 477 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 OR2C3Q8N628 320 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 OR10W1Q8NGF6 305 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 OR5H2Q8NGV7 314 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 DGCR14Q96DF8 476 aaKnown RBP6.49□□□□□ -1.37
HDAC9-220ENST00000461409 ZNF2Q9BSG1 426 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-220ENST00000461409 HINT2Q9BX68 163 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 VCX3AQ9NNX9 186 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 NDUFA4L2Q9NRX3 87 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 FKBP11Q9NYL4 201 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 PRNDQ9UKY0 176 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 ANAPC10Q9UM13 185 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 OR51B2Q9Y5P1 312 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 F11RQ9Y624 299 aaKnown RBP6.49□□□□□ -1.37
HDAC9-220ENST00000461409 SELENOKQ9Y6D0 94 aa6.49□□□□□ -1.37
HDAC9-220ENST00000461409 DNAH1Q9P2D7 4330 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 TEX50A0A1B0GTY4 177 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 GPR31O00270 319 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 NDUFA4O00483 81 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 TSPAN4O14817 238 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 KRASP01116 189 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 RPA2P15927 270 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 NAT1P18440 290 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 PRSS3P35030 304 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 RFX2P48378 723 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 TAS2R20P59543 309 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 WT1-ASQ06250 92 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 LPCAT3Q6P1A2 487 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 Q6ZWC4 215 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 SAMD12Q8N8I0 201 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 OR6F1Q8NGZ6 308 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 OR5B3Q8NH48 314 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 FCAMRQ8WWV6 532 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 TMEM56Q96MV1 263 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 TSC22D3Q99576 134 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 OVOL2Q9BRP0 275 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 FAM212BQ9NTI7 297 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-220ENST00000461409 C21orf62Q9NYP8 219 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 TP53TG1Q9Y2A0 90 aa6.48□□□□□ -1.37
HDAC9-220ENST00000461409 KIR2DL5BA0A0G2JN68 375 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 KIR2DL5BA0A0G2JPC4 375 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 CXorf65A6NEN9 183 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 OR4C46A6NHA9 309 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 C15orf62A8K5M9 175 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 K7EMT4 169 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 UBE2CO00762 179 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 PMP2P02689 132 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 BMI1P35226 326 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 HRH1P35367 487 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 G6PCP35575 357 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 LPAR6P43657 344 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 RELQ04864 619 aaPredicted RBP6.47□□□□□ -1.37
HDAC9-220ENST00000461409 KIR2DL5AQ8N109 375 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 SYT8Q8NBV8 401 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 KIR2DL5BQ8NHK3 375 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 SCARB1Q8WTV0 552 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 C20orf24Q9BUV8 137 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 TMEM14BQ9NUH8 114 aa6.47□□□□□ -1.37
HDAC9-220ENST00000461409 SMIM31A0A1B0GVY4 71 aa6.46□□□□□ -1.38
HDAC9-220ENST00000461409 NUPR2A6NF83 97 aa6.46□□□□□ -1.38
HDAC9-220ENST00000461409 C15orf61A6NNL5 157 aa6.46□□□□□ -1.38
HDAC9-220ENST00000461409 NUPL2O15504 423 aaKnown RBP6.46□□□□□ -1.38
HDAC9-220ENST00000461409 SPRY2O43597 315 aa6.46□□□□□ -1.38
HDAC9-220ENST00000461409 RPS19P39019 145 aaKnown RBP6.46□□□□□ -1.38
HDAC9-220ENST00000461409 MFAP2P55001 183 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms