RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-229	ENST00000460826	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	10.83	□□□□□ -0.68
HDLBP-229	ENST00000460826	KLK9	Q9UKQ9	250 aa		10.83	□□□□□ -0.68
HDLBP-229	ENST00000460826	C13orf42	A0A1B0GVH6	325 aa		10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	ADAP1	O75689	374 aa		10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	DUS4L	O95620	317 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	IFNA17	P01571	189 aa		10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	SPN	P16150	400 aa		10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	DEFA1	P59665	94 aa		10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	DEFA3	P59666	94 aa		10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	GGNBP1	Q5YKI7	109 aa		10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	C11orf87	Q6NUJ2	197 aa		10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	OR2C3	Q8N628	320 aa		10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	DUSP18	Q8NEJ0	188 aa		10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	P2RX4	Q99571	388 aa		10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	PLEKHA3	Q9HB20	300 aa		10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	FBXL7	Q9UJT9	491 aa		10.82	□□□□□ -0.68
HDLBP-229	ENST00000460826	IGHV4OR15-8	A0A075B7B6	117 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826		A0A087WW49	117 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826		A0A0G2JLM5	398 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	CCL24	O00175	119 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	PF4	P02776	101 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	DEFA4	P12838	97 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	MYCNOS	P40205	109 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	SPCS3	P61009	180 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	FHL3	Q13643	280 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	SMCO1	Q147U7	214 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	MRPL41	Q8IXM3	137 aa	Known RBP	10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	LINC00482	Q8N8I6	264 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	NECAP1	Q8NC96	275 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	OR11H1	Q8NG94	326 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	OR52E5	Q8NH55	327 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	COQ8A	Q8NI60	647 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	MITD1	Q8WV92	249 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	USMG5	Q96IX5	58 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	PDCD10	Q9BUL8	212 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826	F11R	Q9Y624	299 aa	Known RBP	10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826		S4R3C0	116 aa		10.81	□□□□□ -0.68
HDLBP-229	ENST00000460826		A0A1B0GU03	582 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	ANKRD34B	A5PLL1	514 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	FAM223B	A6NKX1	122 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	MPTX1	A8MV57	137 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	PITX3	O75364	302 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	DHFR	P00374	187 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	TRBV12-3	P01733	135 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	IGHV3-23	P01764	117 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	HIST1H1B	P16401	226 aa	Known RBP	10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	HOXA1	P49639	335 aa	Predicted RBP	10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	ATP5G2	Q06055	141 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	EXOSC2	Q13868	293 aa	Known RBP	10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	C15orf32	Q32M92	178 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	SLC25A24	Q6NUK1	477 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	ZNF343	Q6P1L6	599 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	FAM223A	Q8IWN6	122 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	OR1N2	Q8NGR9	330 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	OR1S1	Q8NH92	325 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	ZNF431	Q8TF32	576 aa	Predicted RBP	10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	TMED3	Q9Y3Q3	217 aa		10.8	□□□□□ -0.68
HDLBP-229	ENST00000460826	DNAH3	Q8TD57	4116 aa		10.79	□□□□□ -0.68
HDLBP-229	ENST00000460826	IGHV3-21	A0A0B4J1V1	117 aa		10.79	□□□□□ -0.68
HDLBP-229	ENST00000460826	MFSD2B	A6NFX1	497 aa		10.79	□□□□□ -0.68
HDLBP-229	ENST00000460826	INS-IGF2	F8WCM5	200 aa		10.79	□□□□□ -0.68
HDLBP-229	ENST00000460826	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.79	□□□□□ -0.68
HDLBP-229	ENST00000460826	ZNF114	Q8NC26	417 aa		10.79	□□□□□ -0.68
HDLBP-229	ENST00000460826	HSPB7	Q9UBY9	170 aa		10.79	□□□□□ -0.68
HDLBP-229	ENST00000460826	PIGBOS1	A0A0B4J2F0	54 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	CEBPZOS	A8MTT3	80 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	INMT-MINDY4	F8WBC2	141 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	LINC01619	G3V211	115 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	IL5	P05113	134 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	RNASE2	P10153	161 aa	Known RBP	10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	SLC25A6	P12236	298 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	SLURP1	P55000	103 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	ERH	P84090	104 aa	Known RBP	10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	TNFRSF9	Q07011	255 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	ZNF616	Q08AN1	781 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	PLET1	Q6UQ28	207 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	WFDC9	Q8NEX5	89 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	OR1P1	Q8NH06	330 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	CCDC140	Q96MF4	163 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	MARVELD1	Q9BSK0	173 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	RBKS	Q9H477	322 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	ENY2	Q9NPA8	101 aa		10.78	□□□□□ -0.68
HDLBP-229	ENST00000460826	FBN3	Q75N90	2809 aa		10.77	□□□□□ -0.68
HDLBP-229	ENST00000460826	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	10.77	□□□□□ -0.69
HDLBP-229	ENST00000460826		K7EIM0	57 aa		10.77	□□□□□ -0.69
HDLBP-229	ENST00000460826	CCS	O14618	274 aa		10.77	□□□□□ -0.69
HDLBP-229	ENST00000460826	HSPB1	P04792	205 aa	Known RBP	10.77	□□□□□ -0.69
HDLBP-229	ENST00000460826	BSX	Q3C1V8	233 aa		10.77	□□□□□ -0.69
HDLBP-229	ENST00000460826	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.77	□□□□□ -0.69
HDLBP-229	ENST00000460826	DPF1	Q92782	380 aa		10.77	□□□□□ -0.69
HDLBP-229	ENST00000460826	OR10C1	Q96KK4	312 aa		10.77	□□□□□ -0.69
HDLBP-229	ENST00000460826	HEYL	Q9NQ87	328 aa	Predicted RBP	10.77	□□□□□ -0.69
HDLBP-229	ENST00000460826	PEF1	Q9UBV8	284 aa	Known RBP	10.77	□□□□□ -0.69
HDLBP-229	ENST00000460826	PPP5D1	E7EU14	171 aa		10.76	□□□□□ -0.69
HDLBP-229	ENST00000460826	BMPR1B	O00238	502 aa		10.76	□□□□□ -0.69
HDLBP-229	ENST00000460826	IFNA21	P01568	189 aa		10.76	□□□□□ -0.69
HDLBP-229	ENST00000460826	CD33	P20138	364 aa		10.76	□□□□□ -0.69
HDLBP-229	ENST00000460826	SNCA	P37840	140 aa		10.76	□□□□□ -0.69
HDLBP-229	ENST00000460826	PVRIG	Q6DKI7	326 aa		10.76	□□□□□ -0.69

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