RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 SPANXN2Q5MJ10 180 aa10.39□□□□□ -0.75
SCAMP4-206ENST00000460767 PVRIGQ6DKI7 326 aa10.39□□□□□ -0.75
SCAMP4-206ENST00000460767 ACSM6Q6P461 480 aa10.39□□□□□ -0.75
SCAMP4-206ENST00000460767 IL34Q6ZMJ4 242 aa10.39□□□□□ -0.75
SCAMP4-206ENST00000460767 CCDC71LQ8N9Z2 235 aa10.39□□□□□ -0.75
SCAMP4-206ENST00000460767 OR1L8Q8NGR8 309 aa10.39□□□□□ -0.75
SCAMP4-206ENST00000460767 CCDC140Q96MF4 163 aa10.39□□□□□ -0.75
SCAMP4-206ENST00000460767 TMEM56Q96MV1 263 aa10.39□□□□□ -0.75
SCAMP4-206ENST00000460767 TSC22D3Q99576 134 aa10.39□□□□□ -0.75
SCAMP4-206ENST00000460767 NAA60Q9H7X0 242 aa10.39□□□□□ -0.75
SCAMP4-206ENST00000460767 COPZ2Q9P299 210 aa10.39□□□□□ -0.75
SCAMP4-206ENST00000460767 PRNDQ9UKY0 176 aa10.39□□□□□ -0.75
SCAMP4-206ENST00000460767 NSG2Q9Y328 171 aa10.39□□□□□ -0.75
SCAMP4-206ENST00000460767 TMEM56-RWDD3S4R434 201 aa10.39□□□□□ -0.75
SCAMP4-206ENST00000460767 A0A0G2JRQ6 117 aa10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 C13orf42A0A1B0GVH6 325 aa10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 BMPR1BO00238 502 aa10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 SERPINE2P07093 398 aa10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 OR5AC1P0C628 307 aa10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 TRAPPC2P0DI81 140 aa10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 TRAPPC2BP0DI82 140 aa10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 C15orf32Q32M92 178 aa10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 SP6Q3SY56 376 aa10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 Q8N1Y9 231 aa10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 ZNF114Q8NC26 417 aa10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 ZNF355PQ9NSJ1 428 aa10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 FKBP11Q9NYL4 201 aa10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 PEF1Q9UBV8 284 aaKnown RBP10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 SCP2D1Q9UJQ7 156 aa10.38□□□□□ -0.75
SCAMP4-206ENST00000460767 TEX13DA0A0J9YY54 714 aaPredicted RBP10.37□□□□□ -0.75
SCAMP4-206ENST00000460767 OR2J3O76001 311 aa10.37□□□□□ -0.75
SCAMP4-206ENST00000460767 NDUFB8O95169 186 aa10.37□□□□□ -0.75
SCAMP4-206ENST00000460767 AP3S2P59780 193 aa10.37□□□□□ -0.75
SCAMP4-206ENST00000460767 DHODHQ02127 395 aa10.37□□□□□ -0.75
SCAMP4-206ENST00000460767 Q6ZRM9 215 aa10.37□□□□□ -0.75
SCAMP4-206ENST00000460767 TOMM5Q8N4H5 51 aa10.37□□□□□ -0.75
SCAMP4-206ENST00000460767 LSM10Q969L4 123 aaKnown RBP10.37□□□□□ -0.75
SCAMP4-206ENST00000460767 ZNF414Q96IQ9 312 aa10.37□□□□□ -0.75
SCAMP4-206ENST00000460767 OR51B2Q9Y5P1 312 aa10.37□□□□□ -0.75
SCAMP4-206ENST00000460767 SNAPC5O75971 98 aa10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 REG1AP05451 166 aa10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 HIST1H1BP16401 226 aaKnown RBP10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 ZP3P21754 424 aa10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 BTCP35070 178 aa10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 HSPE1P61604 102 aaKnown RBP10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 PRCDQ00LT1 54 aa10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 ATP5G2Q06055 141 aa10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 EXOSC2Q13868 293 aaKnown RBP10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 TMEM187Q14656 261 aa10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 IZUMO4Q1ZYL8 232 aa10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 FAM209BQ5JX69 171 aa10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 H2BFWTQ7Z2G1 175 aa10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 SGPP2Q8IWX5 399 aa10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 SELENOHQ8IZQ5 122 aaKnown RBP10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 IL22RA2Q969J5 263 aa10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 SIGLEC8Q9NYZ4 499 aa10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 FBXL7Q9UJT9 491 aa10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 C14orf166Q9Y224 244 aaKnown RBP10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 F11RQ9Y624 299 aaKnown RBP10.36□□□□□ -0.75
SCAMP4-206ENST00000460767 MFSD2BA6NFX1 497 aa10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 F8W735 103 aaPredicted RBP10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 DHFRP00374 187 aa10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 OR13C7P0DN81 318 aa10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 FAUP35544 74 aaKnown RBP10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 MECP2P51608 486 aaKnown RBP10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 BSXQ3C1V8 233 aa10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 FAM219AQ8IW50 185 aa10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 OR2C3Q8N628 320 aa10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 ZNF502Q8TBZ5 544 aa10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 RBPMSQ93062 196 aaKnown RBP10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 SCGB3A2Q96PL1 93 aa10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 ATP6V0BQ99437 205 aa10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 SLC25A21Q9BQT8 299 aaPredicted RBP10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 MCUBQ9NWR8 336 aa10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 HERC2O95714 4834 aa10.35□□□□□ -0.75
SCAMP4-206ENST00000460767 ANKRD34BA5PLL1 514 aa10.34□□□□□ -0.75
SCAMP4-206ENST00000460767 K7EIM0 57 aa10.34□□□□□ -0.75
SCAMP4-206ENST00000460767 FCGR2BP31994 310 aaPredicted RBP10.34□□□□□ -0.75
SCAMP4-206ENST00000460767 CNPY1Q3B7I2 92 aa10.34□□□□□ -0.75
SCAMP4-206ENST00000460767 NMSQ5H8A3 153 aa10.34□□□□□ -0.75
SCAMP4-206ENST00000460767 OR1P1Q8NH06 330 aa10.34□□□□□ -0.75
SCAMP4-206ENST00000460767 VN1R17PQ8TDU5 208 aa10.34□□□□□ -0.75
SCAMP4-206ENST00000460767 ST8SIA3O43173 380 aa10.33□□□□□ -0.76
SCAMP4-206ENST00000460767 ATG12O94817 140 aa10.33□□□□□ -0.76
SCAMP4-206ENST00000460767 IGLV1-51P01701 117 aa10.33□□□□□ -0.76
SCAMP4-206ENST00000460767 IL7P13232 177 aa10.33□□□□□ -0.76
SCAMP4-206ENST00000460767 HAGHQ16775 308 aa10.33□□□□□ -0.76
SCAMP4-206ENST00000460767 TMEM128Q5BJH2 165 aa10.33□□□□□ -0.76
SCAMP4-206ENST00000460767 LRTM2Q8N967 370 aa10.33□□□□□ -0.76
SCAMP4-206ENST00000460767 OR52E5Q8NH55 327 aa10.33□□□□□ -0.76
SCAMP4-206ENST00000460767 OR4A16Q8NH70 328 aa10.33□□□□□ -0.76
SCAMP4-206ENST00000460767 CXorf58Q96LI9 332 aa10.33□□□□□ -0.76
SCAMP4-206ENST00000460767 ALMS1Q8TCU4 4167 aa10.32□□□□□ -0.76
SCAMP4-206ENST00000460767 TRBV7-1A0A0A6YYK4 115 aa10.32□□□□□ -0.76
SCAMP4-206ENST00000460767 NAP1L6A6NFF2 107 aa10.32□□□□□ -0.76
SCAMP4-206ENST00000460767 I3L2K1 104 aa10.32□□□□□ -0.76
SCAMP4-206ENST00000460767 LGALS9O00182 355 aa10.32□□□□□ -0.76
SCAMP4-206ENST00000460767 PLA2G10O15496 165 aa10.32□□□□□ -0.76
SCAMP4-206ENST00000460767 HLA-AP01891 365 aaKnown RBP10.32□□□□□ -0.76
SCAMP4-206ENST00000460767 CSN3P07498 182 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms