RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 KLHL30-AS1Q8NEE0 82 aa17.46■□□□□ 0.39
C9orf3-209ENST00000460573 FAM223BA6NKX1 122 aa17.45■□□□□ 0.38
C9orf3-209ENST00000460573 INS-IGF2F8WCM5 200 aa17.45■□□□□ 0.38
C9orf3-209ENST00000460573 DEFA4P12838 97 aa17.45■□□□□ 0.38
C9orf3-209ENST00000460573 SPCS3P61009 180 aa17.45■□□□□ 0.38
C9orf3-209ENST00000460573 RUNX1Q01196 453 aa17.45■□□□□ 0.38
C9orf3-209ENST00000460573 WT1-ASQ06250 92 aa17.45■□□□□ 0.38
C9orf3-209ENST00000460573 FAM223AQ8IWN6 122 aa17.45■□□□□ 0.38
C9orf3-209ENST00000460573 OR1L6Q8NGR2 347 aa17.45■□□□□ 0.38
C9orf3-209ENST00000460573 MITD1Q8WV92 249 aa17.45■□□□□ 0.38
C9orf3-209ENST00000460573 PLEKHA3Q9HB20 300 aa17.45■□□□□ 0.38
C9orf3-209ENST00000460573 C13orf42A0A1B0GVH6 325 aa17.44■□□□□ 0.38
C9orf3-209ENST00000460573 IL5P05113 134 aa17.44■□□□□ 0.38
C9orf3-209ENST00000460573 ERHP84090 104 aaKnown RBP17.44■□□□□ 0.38
C9orf3-209ENST00000460573 C1QL4Q86Z23 238 aa17.44■□□□□ 0.38
C9orf3-209ENST00000460573 NECAP1Q8NC96 275 aa17.44■□□□□ 0.38
C9orf3-209ENST00000460573 IFNA21P01568 189 aa17.43■□□□□ 0.38
C9orf3-209ENST00000460573 REG1AP05451 166 aa17.43■□□□□ 0.38
C9orf3-209ENST00000460573 ZNF431Q8TF32 576 aaPredicted RBP17.43■□□□□ 0.38
C9orf3-209ENST00000460573 ENY2Q9NPA8 101 aa17.43■□□□□ 0.38
C9orf3-209ENST00000460573 THYN1Q9P016 225 aa17.43■□□□□ 0.38
C9orf3-209ENST00000460573 I3L521 148 aa17.42■□□□□ 0.38
C9orf3-209ENST00000460573 HOXB5P09067 269 aa17.42■□□□□ 0.38
C9orf3-209ENST00000460573 RHOGP84095 191 aa17.42■□□□□ 0.38
C9orf3-209ENST00000460573 C18orf65Q6ZTR6 163 aa17.42■□□□□ 0.38
C9orf3-209ENST00000460573 C8orf86Q6ZUL3 223 aa17.42■□□□□ 0.38
C9orf3-209ENST00000460573 OR2C3Q8N628 320 aa17.42■□□□□ 0.38
C9orf3-209ENST00000460573 OR52B4Q8NGK2 314 aa17.42■□□□□ 0.38
C9orf3-209ENST00000460573 FANCD2OSQ96PS1 177 aa17.42■□□□□ 0.38
C9orf3-209ENST00000460573 GNB4Q9HAV0 340 aa17.42■□□□□ 0.38
C9orf3-209ENST00000460573 F11RQ9Y624 299 aaKnown RBP17.42■□□□□ 0.38
C9orf3-209ENST00000460573 MEGF8Q7Z7M0 2845 aa17.42■□□□□ 0.38
C9orf3-209ENST00000460573 INMT-MINDY4F8WBC2 141 aa17.41■□□□□ 0.38
C9orf3-209ENST00000460573 PRAF2O60831 178 aa17.41■□□□□ 0.38
C9orf3-209ENST00000460573 PRH1P02810 166 aa17.41■□□□□ 0.38
C9orf3-209ENST00000460573 LGALS1P09382 135 aaKnown RBP17.41■□□□□ 0.38
C9orf3-209ENST00000460573 MYCNOSP40205 109 aa17.41■□□□□ 0.38
C9orf3-209ENST00000460573 ATP5G2Q06055 141 aa17.41■□□□□ 0.38
C9orf3-209ENST00000460573 FAM209BQ5JX69 171 aa17.41■□□□□ 0.38
C9orf3-209ENST00000460573 GGNBP1Q5YKI7 109 aa17.41■□□□□ 0.38
C9orf3-209ENST00000460573 ZNF114Q8NC26 417 aa17.41■□□□□ 0.38
C9orf3-209ENST00000460573 OR1S1Q8NH92 325 aa17.41■□□□□ 0.38
C9orf3-209ENST00000460573 MARVELD1Q9BSK0 173 aa17.41■□□□□ 0.38
C9orf3-209ENST00000460573 GPN1Q9HCN4 374 aaPredicted RBP17.41■□□□□ 0.38
C9orf3-209ENST00000460573 IGLV11-55A0A075B6I3 123 aa17.4■□□□□ 0.38
C9orf3-209ENST00000460573 OR2J3O76001 311 aa17.4■□□□□ 0.38
C9orf3-209ENST00000460573 PF4P02776 101 aa17.4■□□□□ 0.38
C9orf3-209ENST00000460573 HOXA1P49639 335 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-209ENST00000460573 OR1P1Q8NH06 330 aa17.4■□□□□ 0.38
C9orf3-209ENST00000460573 SEC22CQ9BRL7 303 aa17.4■□□□□ 0.38
C9orf3-209ENST00000460573 HSPB7Q9UBY9 170 aa17.4■□□□□ 0.38
C9orf3-209ENST00000460573 FBXL7Q9UJT9 491 aa17.4■□□□□ 0.38
C9orf3-209ENST00000460573 FAM90A26D6RGX4 464 aa17.39■□□□□ 0.37
C9orf3-209ENST00000460573 PITX3O75364 302 aa17.39■□□□□ 0.37
C9orf3-209ENST00000460573 SNCAP37840 140 aa17.39■□□□□ 0.37
C9orf3-209ENST00000460573 SUB1P53999 127 aaKnown RBP eCLIP17.39■□□□□ 0.37
C9orf3-209ENST00000460573 C12orf45Q8N5I9 185 aaPredicted RBP17.39■□□□□ 0.37
C9orf3-209ENST00000460573 CEBPZOSA8MTT3 80 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 CCL24O00175 119 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 ADAP1O75689 374 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 IGHV3-11P01762 117 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 TNFRSF9Q07011 255 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 C15orf32Q32M92 178 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 SPINK9Q5DT21 86 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 SLC25A24Q6NUK1 477 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 ZNF343Q6P1L6 599 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 C19orf35Q6ZS72 473 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 OR11H1Q8NG94 326 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 RAX2Q96IS3 184 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 CXorf58Q96LI9 332 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 OR5B12Q96R08 314 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 P2RX4Q99571 388 aa17.38■□□□□ 0.37
C9orf3-209ENST00000460573 SNRPGP15A8MWD9 76 aa17.37■□□□□ 0.37
C9orf3-209ENST00000460573 HSPB1P04792 205 aaKnown RBP17.37■□□□□ 0.37
C9orf3-209ENST00000460573 OR1N2Q8NGR9 330 aa17.37■□□□□ 0.37
C9orf3-209ENST00000460573 HIPK2Q9H2X6 1198 aa17.37■□□□□ 0.37
C9orf3-209ENST00000460573 A0A1B0GVG6 124 aa17.36■□□□□ 0.37
C9orf3-209ENST00000460573 MED6O75586 246 aa17.36■□□□□ 0.37
C9orf3-209ENST00000460573 NDUFB8O95169 186 aa17.36■□□□□ 0.37
C9orf3-209ENST00000460573 SPNP16150 400 aa17.36■□□□□ 0.37
C9orf3-209ENST00000460573 ZNF616Q08AN1 781 aa17.36■□□□□ 0.37
C9orf3-209ENST00000460573 ETV3LQ6ZN32 361 aa17.36■□□□□ 0.37
C9orf3-209ENST00000460573 DPF1Q92782 380 aa17.36■□□□□ 0.37
C9orf3-209ENST00000460573 RANGRFQ9HD47 186 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-209ENST00000460573 HEYLQ9NQ87 328 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-209ENST00000460573 DMRT1Q9Y5R6 373 aa17.36■□□□□ 0.37
C9orf3-209ENST00000460573 OR8U8P0C7N1 319 aa17.35■□□□□ 0.37
C9orf3-209ENST00000460573 HTR2BP41595 481 aa17.35■□□□□ 0.37
C9orf3-209ENST00000460573 DEFA5Q01523 94 aa17.35■□□□□ 0.37
C9orf3-209ENST00000460573 FHL3Q13643 280 aa17.35■□□□□ 0.37
C9orf3-209ENST00000460573 EXOSC2Q13868 293 aaKnown RBP17.35■□□□□ 0.37
C9orf3-209ENST00000460573 DEFB136Q30KP8 78 aa17.35■□□□□ 0.37
C9orf3-209ENST00000460573 VN1R17PQ8TDU5 208 aa17.35■□□□□ 0.37
C9orf3-209ENST00000460573 DTD1Q8TEA8 209 aa17.35■□□□□ 0.37
C9orf3-209ENST00000460573 EEF1AKMT3Q96AZ1 226 aa17.35■□□□□ 0.37
C9orf3-209ENST00000460573 PEF1Q9UBV8 284 aaKnown RBP17.35■□□□□ 0.37
C9orf3-209ENST00000460573 TRBV7-1A0A0A6YYK4 115 aa17.34■□□□□ 0.37
C9orf3-209ENST00000460573 LINC01619G3V211 115 aa17.34■□□□□ 0.37
C9orf3-209ENST00000460573 MFAP2P55001 183 aa17.34■□□□□ 0.37
C9orf3-209ENST00000460573 BSXQ3C1V8 233 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms