RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 IDNKQ5T6J7 187 aa9.05□□□□□ -0.96
GPNMB-204ENST00000459927 FAM90A2PQ658T7 463 aa9.05□□□□□ -0.96
GPNMB-204ENST00000459927 TMEM116Q8NCL8 245 aa9.05□□□□□ -0.96
GPNMB-204ENST00000459927 C11orf45Q8TAV5 145 aa9.05□□□□□ -0.96
GPNMB-204ENST00000459927 FCAMRQ8WWV6 532 aa9.05□□□□□ -0.96
GPNMB-204ENST00000459927 SLC25A38Q96DW6 304 aa9.05□□□□□ -0.96
GPNMB-204ENST00000459927 COMMD9Q9P000 198 aa9.05□□□□□ -0.96
GPNMB-204ENST00000459927 OR51B2Q9Y5P1 312 aa9.05□□□□□ -0.96
GPNMB-204ENST00000459927 TRAV14DV4A0A0A6YYC5 116 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 MARCH11A6NNE9 402 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 SNAPC5O75971 98 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 PSMB9P28065 219 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 CBX5P45973 191 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 RFX2P48378 723 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 HSPA13P48723 471 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 ERVK-16P61578 105 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 Q56UQ5 140 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 IZUMO2Q6UXV1 221 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 TMEM17Q86X19 198 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 UBAC2Q8NBM4 344 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 OR11H2Q8NH07 326 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 BORCS5Q969J3 196 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 LSM10Q969L4 123 aaKnown RBP9.04□□□□□ -0.96
GPNMB-204ENST00000459927 DGCR14Q96DF8 476 aaKnown RBP9.04□□□□□ -0.96
GPNMB-204ENST00000459927 OR10C1Q96KK4 312 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 VCX3BQ9H321 246 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 RNF167Q9H6Y7 350 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 FKBP11Q9NYL4 201 aa9.04□□□□□ -0.96
GPNMB-204ENST00000459927 IGHV3-49A0A0A0MS15 119 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 MEIS3P1A6NDR6 274 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 DBX1A6NMT0 343 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 YIF1AO95070 293 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 G6PCP35575 357 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 TFPI2P48307 235 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 MFAP4P55083 255 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 GABARAPL2P60520 117 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 PRR20EP86478 221 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 PRR20CP86479 221 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 PRR20DP86480 221 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 PRR20BP86481 221 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 PRR20AP86496 221 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 OR1P1Q8NH06 330 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 TMEM56Q96MV1 263 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 TXN2Q99757 166 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 MFFQ9GZY8 342 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 PRNDQ9UKY0 176 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 RAB26Q9ULW5 256 aa9.03□□□□□ -0.96
GPNMB-204ENST00000459927 IGKV3-7A0A075B6H7 116 aa9.02□□□□□ -0.97
GPNMB-204ENST00000459927 I3L2K1 104 aa9.02□□□□□ -0.97
GPNMB-204ENST00000459927 NUPL2O15504 423 aaKnown RBP9.02□□□□□ -0.97
GPNMB-204ENST00000459927 XRCC3O43542 346 aa9.02□□□□□ -0.97
GPNMB-204ENST00000459927 TCTAP57738 103 aa9.02□□□□□ -0.97
GPNMB-204ENST00000459927 HERV-K104P61576 105 aa9.02□□□□□ -0.97
GPNMB-204ENST00000459927 RELQ04864 619 aaPredicted RBP9.02□□□□□ -0.97
GPNMB-204ENST00000459927 RBMS2Q15434 407 aaKnown RBP9.02□□□□□ -0.97
GPNMB-204ENST00000459927 LYSMD2Q8IV50 215 aa9.02□□□□□ -0.97
GPNMB-204ENST00000459927 LILRB2Q8N423 598 aa9.02□□□□□ -0.97
GPNMB-204ENST00000459927 GBGT1Q8N5D6 347 aa9.02□□□□□ -0.97
GPNMB-204ENST00000459927 C2CD4CQ8TF44 421 aa9.02□□□□□ -0.97
GPNMB-204ENST00000459927 SLC25A46Q96AG3 418 aa9.02□□□□□ -0.97
GPNMB-204ENST00000459927 MOB3AQ96BX8 217 aa9.02□□□□□ -0.97
GPNMB-204ENST00000459927 S100A16Q96FQ6 103 aaKnown RBP9.02□□□□□ -0.97
GPNMB-204ENST00000459927 CMTM3Q96MX0 182 aa9.02□□□□□ -0.97
GPNMB-204ENST00000459927 ZNF2Q9BSG1 426 aaPredicted RBP9.02□□□□□ -0.97
GPNMB-204ENST00000459927 NXF2Q9GZY0 626 aaKnown RBP9.02□□□□□ -0.97
GPNMB-204ENST00000459927 TMEM14BQ9NUH8 114 aa9.02□□□□□ -0.97
GPNMB-204ENST00000459927 FBXL17Q9UF56 701 aa9.02□□□□□ -0.97
GPNMB-204ENST00000459927 IGHV3OR16-13A0A075B7E8 117 aa9.01□□□□□ -0.97
GPNMB-204ENST00000459927 IGHV3-74A0A0B4J1X5 117 aa9.01□□□□□ -0.97
GPNMB-204ENST00000459927 PMP2P02689 132 aa9.01□□□□□ -0.97
GPNMB-204ENST00000459927 RLN1P04808 185 aa9.01□□□□□ -0.97
GPNMB-204ENST00000459927 NAT1P18440 290 aa9.01□□□□□ -0.97
GPNMB-204ENST00000459927 PAFAH1B2P68402 229 aa9.01□□□□□ -0.97
GPNMB-204ENST00000459927 OR6F1Q8NGZ6 308 aa9.01□□□□□ -0.97
GPNMB-204ENST00000459927 FCGR1BQ92637 280 aa9.01□□□□□ -0.97
GPNMB-204ENST00000459927 YTHDF1Q9BYJ9 559 aaKnown RBP9.01□□□□□ -0.97
GPNMB-204ENST00000459927 EHFQ9NZC4 300 aa9.01□□□□□ -0.97
GPNMB-204ENST00000459927 APLNQ9ULZ1 77 aa9.01□□□□□ -0.97
GPNMB-204ENST00000459927 GPR31O00270 319 aa9□□□□□ -0.97
GPNMB-204ENST00000459927 DEFB4AO15263 64 aa9□□□□□ -0.97
GPNMB-204ENST00000459927 TMEM127O75204 238 aa9□□□□□ -0.97
GPNMB-204ENST00000459927 MT-CO2P00403 227 aa9□□□□□ -0.97
GPNMB-204ENST00000459927 IGHV3-48P01763 117 aa9□□□□□ -0.97
GPNMB-204ENST00000459927 CD5P06127 495 aa9□□□□□ -0.97
GPNMB-204ENST00000459927 TMEM187Q14656 261 aa9□□□□□ -0.97
GPNMB-204ENST00000459927 TCF24Q7RTU0 167 aa9□□□□□ -0.97
GPNMB-204ENST00000459927 CMTM1Q8IZ96 169 aa9□□□□□ -0.97
GPNMB-204ENST00000459927 DUSP18Q8NEJ0 188 aa9□□□□□ -0.97
GPNMB-204ENST00000459927 TSPAN14Q8NG11 270 aa9□□□□□ -0.97
GPNMB-204ENST00000459927 MISP3Q96FF7 219 aa9□□□□□ -0.97
GPNMB-204ENST00000459927 C11orf68Q9H3H3 251 aaKnown RBP9□□□□□ -0.97
GPNMB-204ENST00000459927 LOC100506127A0A0U1RQW1 187 aa8.99□□□□□ -0.97
GPNMB-204ENST00000459927 DFFBO76075 338 aa8.99□□□□□ -0.97
GPNMB-204ENST00000459927 APOHP02749 345 aaPredicted RBP8.99□□□□□ -0.97
GPNMB-204ENST00000459927 HSPE1P61604 102 aaKnown RBP8.99□□□□□ -0.97
GPNMB-204ENST00000459927 TOMM20LQ6UXN7 152 aa8.99□□□□□ -0.97
GPNMB-204ENST00000459927 SEC22AQ96IW7 307 aa8.99□□□□□ -0.97
GPNMB-204ENST00000459927 TSC22D3Q99576 134 aa8.99□□□□□ -0.97
GPNMB-204ENST00000459927 MS4A6AQ9H2W1 248 aa8.99□□□□□ -0.97
GPNMB-204ENST00000459927 VSIRQ9H7M9 311 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms