RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 INPP1P49441 399 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 MEF2DQ14814 521 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 ZNF57Q68EA5 555 aaPredicted RBP12.22□□□□□ -0.45
COL7A1-203ENST00000459756 SLC25A24Q6NUK1 477 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 ADAMTSL5Q6ZMM2 481 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 GTSCR1Q86UQ5 136 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 SBSPONQ8IVN8 264 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 TOMM5Q8N4H5 51 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 OR1L6Q8NGR2 347 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 OR4A16Q8NH70 328 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 ZFAND1Q8TCF1 268 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 DYNLRB2Q8TF09 96 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 MRGPRFQ96AM1 343 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 SRRQ9GZT4 340 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 MCUBQ9NWR8 336 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 ZNF320A2RRD8 509 aa12.21□□□□□ -0.45
COL7A1-203ENST00000459756 IZUMO1RA6ND01 250 aa12.21□□□□□ -0.45
COL7A1-203ENST00000459756 DBX1A6NMT0 343 aa12.21□□□□□ -0.45
COL7A1-203ENST00000459756 GPR183P32249 361 aa12.21□□□□□ -0.45
COL7A1-203ENST00000459756 ETV6P41212 452 aa12.21□□□□□ -0.45
COL7A1-203ENST00000459756 CD300EQ496F6 205 aaPredicted RBP12.21□□□□□ -0.45
COL7A1-203ENST00000459756 CCDC71LQ8N9Z2 235 aa12.21□□□□□ -0.45
COL7A1-203ENST00000459756 TRIM63Q969Q1 353 aa12.21□□□□□ -0.45
COL7A1-203ENST00000459756 TECRQ9NZ01 308 aaKnown RBP12.21□□□□□ -0.45
COL7A1-203ENST00000459756 PTTG2Q9NZH5 202 aa12.21□□□□□ -0.45
COL7A1-203ENST00000459756 STAB2Q8WWQ8 2551 aa12.2□□□□□ -0.46
COL7A1-203ENST00000459756 LINC00854A0A1B0GVQ3 168 aa12.2□□□□□ -0.46
COL7A1-203ENST00000459756 A8MWP6 167 aa12.2□□□□□ -0.46
COL7A1-203ENST00000459756 ATG12O94817 140 aa12.2□□□□□ -0.46
COL7A1-203ENST00000459756 CBLN1P23435 193 aa12.2□□□□□ -0.46
COL7A1-203ENST00000459756 MFAP2P55001 183 aa12.2□□□□□ -0.46
COL7A1-203ENST00000459756 DEFB114Q30KQ6 69 aa12.2□□□□□ -0.46
COL7A1-203ENST00000459756 TRIQKQ629K1 86 aa12.2□□□□□ -0.46
COL7A1-203ENST00000459756 PLET1Q6UQ28 207 aa12.2□□□□□ -0.46
COL7A1-203ENST00000459756 OR13C8Q8NGS7 320 aa12.2□□□□□ -0.46
COL7A1-203ENST00000459756 TP53RKQ96S44 253 aa12.2□□□□□ -0.46
COL7A1-203ENST00000459756 ATP6V0BQ99437 205 aa12.2□□□□□ -0.46
COL7A1-203ENST00000459756 C19orf73Q9NVV2 129 aa12.2□□□□□ -0.46
COL7A1-203ENST00000459756 COPZ2Q9P299 210 aa12.2□□□□□ -0.46
COL7A1-203ENST00000459756 C3orf85A0A1B0GTC6 90 aa12.19□□□□□ -0.46
COL7A1-203ENST00000459756 B3GALNT1O75752 331 aa12.19□□□□□ -0.46
COL7A1-203ENST00000459756 CTSDP07339 412 aaPredicted RBP12.19□□□□□ -0.46
COL7A1-203ENST00000459756 HSPE1P61604 102 aaKnown RBP12.19□□□□□ -0.46
COL7A1-203ENST00000459756 BAK1Q16611 211 aa12.19□□□□□ -0.46
COL7A1-203ENST00000459756 OR51S1Q8NGJ8 323 aa12.19□□□□□ -0.46
COL7A1-203ENST00000459756 OR1P1Q8NH06 330 aa12.19□□□□□ -0.46
COL7A1-203ENST00000459756 MARCH1Q8TCQ1 289 aa12.19□□□□□ -0.46
COL7A1-203ENST00000459756 PALMDQ9NP74 551 aa12.19□□□□□ -0.46
COL7A1-203ENST00000459756 ZC4H2Q9NQZ6 224 aa12.19□□□□□ -0.46
COL7A1-203ENST00000459756 HUWE1Q7Z6Z7 4374 aaKnown RBP12.18□□□□□ -0.46
COL7A1-203ENST00000459756 TMEM213A2RRL7 107 aa12.18□□□□□ -0.46
COL7A1-203ENST00000459756 TGOLN2O43493 480 aa12.18□□□□□ -0.46
COL7A1-203ENST00000459756 FAUP35544 74 aaKnown RBP12.18□□□□□ -0.46
COL7A1-203ENST00000459756 AKR1C2P52895 323 aa12.18□□□□□ -0.46
COL7A1-203ENST00000459756 AP3S2P59780 193 aa12.18□□□□□ -0.46
COL7A1-203ENST00000459756 PRCDQ00LT1 54 aa12.18□□□□□ -0.46
COL7A1-203ENST00000459756 KLF9Q13886 244 aaPredicted RBP12.18□□□□□ -0.46
COL7A1-203ENST00000459756 SURF2Q15527 256 aaPredicted RBP12.18□□□□□ -0.46
COL7A1-203ENST00000459756 SPSB3Q6PJ21 355 aa12.18□□□□□ -0.46
COL7A1-203ENST00000459756 OR2C3Q8N628 320 aa12.18□□□□□ -0.46
COL7A1-203ENST00000459756 SCARB1Q8WTV0 552 aa12.18□□□□□ -0.46
COL7A1-203ENST00000459756 BSCL2Q96G97 398 aaPredicted RBP12.18□□□□□ -0.46
COL7A1-203ENST00000459756 ZMAT4Q9H898 229 aa12.18□□□□□ -0.46
COL7A1-203ENST00000459756 C21orf62Q9NYP8 219 aa12.18□□□□□ -0.46
COL7A1-203ENST00000459756 OR2T8A6NH00 312 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 ZNF785A8K8V0 405 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 IGKV1-5P01602 117 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 P0C879 139 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 EDN2P20800 178 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 UCP1P25874 307 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 ELLP55199 621 aaPredicted RBP12.17□□□□□ -0.46
COL7A1-203ENST00000459756 TRIM16LQ309B1 348 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 UNQ9165/PRO28630Q6UXU0 137 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 UXS1Q8NBZ7 420 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 ZNF114Q8NC26 417 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 CACNG8Q8WXS5 425 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 MARC2Q969Z3 335 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 RCHY1Q96PM5 261 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 SDHCQ99643 169 aaPredicted RBP12.17□□□□□ -0.46
COL7A1-203ENST00000459756 PRRT1Q99946 306 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 ZNF436Q9C0F3 470 aaPredicted RBP12.17□□□□□ -0.46
COL7A1-203ENST00000459756 PLEKHA3Q9HB20 300 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 SLC2A8Q9NY64 477 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 C14orf166Q9Y224 244 aaKnown RBP12.17□□□□□ -0.46
COL7A1-203ENST00000459756 UFC1Q9Y3C8 167 aa12.17□□□□□ -0.46
COL7A1-203ENST00000459756 K7EIM0 57 aa12.16□□□□□ -0.46
COL7A1-203ENST00000459756 CD81P60033 236 aa12.16□□□□□ -0.46
COL7A1-203ENST00000459756 ERHP84090 104 aaKnown RBP12.16□□□□□ -0.46
COL7A1-203ENST00000459756 GUCA2BQ16661 112 aa12.16□□□□□ -0.46
COL7A1-203ENST00000459756 SP6Q3SY56 376 aa12.16□□□□□ -0.46
COL7A1-203ENST00000459756 TM4SF20Q53R12 229 aa12.16□□□□□ -0.46
COL7A1-203ENST00000459756 TM2D3Q9BRN9 247 aa12.16□□□□□ -0.46
COL7A1-203ENST00000459756 TUBA4BQ9H853 241 aa12.16□□□□□ -0.46
COL7A1-203ENST00000459756 GAR1Q9NY12 217 aaKnown RBP12.16□□□□□ -0.46
COL7A1-203ENST00000459756 SCP2D1Q9UJQ7 156 aa12.16□□□□□ -0.46
COL7A1-203ENST00000459756 IGHV3-21A0A0B4J1V1 117 aa12.15□□□□□ -0.46
COL7A1-203ENST00000459756 A0A0B4J293 547 aa12.15□□□□□ -0.46
COL7A1-203ENST00000459756 IGHV3-35A0A0C4DH35 117 aa12.15□□□□□ -0.46
COL7A1-203ENST00000459756 C8orf88P0DMB2 117 aa12.15□□□□□ -0.46
COL7A1-203ENST00000459756 IL7P13232 177 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms