RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SRSF6Q13247 344 aaKnown RBP7.24□□□□□ -1.25
HDAC3-202ENST00000459727 RPEL1Q2QD12 228 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 VMA21Q3ZAQ7 101 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 PDZD11Q5EBL8 140 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 RASL11AQ6T310 242 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 REC114Q7Z4M0 266 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 MRPL52Q86TS9 123 aaKnown RBP7.24□□□□□ -1.25
HDAC3-202ENST00000459727 OR4P4Q8NGL7 312 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 TMEM167AQ8TBQ9 72 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 SSMEM1Q8WWF3 244 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 ZCCHC14Q8WYQ9 949 aaKnown RBP7.24□□□□□ -1.25
HDAC3-202ENST00000459727 FLYWCH2Q96CP2 140 aaKnown RBP7.24□□□□□ -1.25
HDAC3-202ENST00000459727 SMIM12Q96EX1 92 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 EAF1Q96JC9 268 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-202ENST00000459727 HARBI1Q96MB7 349 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 CCL13Q99616 98 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 NABP2Q9BQ15 211 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 HINT2Q9BX68 163 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 SAP30LQ9HAJ7 183 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 OSTCQ9NRP0 149 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 KAAG1Q9UBP8 84 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 PPIAL4AQ9Y536 164 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 GCN1Q92616 2671 aaKnown RBP7.23□□□□□ -1.25
HDAC3-202ENST00000459727 A0A087X0M5 115 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 TRAV3A0A0B4J244 114 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 TEX50A0A1B0GTY4 177 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 A0A1B0GX30 115 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 HELTA6NFD8 242 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 ISLRO14498 428 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 SAA1P0DJI8 122 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-202ENST00000459727 CT45A6P0DMU7 189 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 CT45A5P0DMU8 189 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 CT45A7P0DMV0 189 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 RNASE2P10153 161 aaKnown RBP7.23□□□□□ -1.25
HDAC3-202ENST00000459727 PAX1P15863 534 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 IGFBP2P18065 325 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 DDTP30046 118 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 LGALS7P47929 136 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 GNG10P50151 68 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 ZNF90Q03938 601 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 RBPJQ06330 500 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 GCSAMLQ5JQS6 135 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 GFI1BQ5VTD9 330 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 TCF23Q7RTU1 214 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 GBGT1Q8N5D6 347 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 RBMXL3Q8N7X1 1067 aaKnown RBP7.23□□□□□ -1.25
HDAC3-202ENST00000459727 BEND2Q8NDZ0 799 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 OR10X1Q8NGY0 326 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 TMEM37Q8WXS4 190 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 DOCK7Q96N67 2140 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 ELOVL1Q9BW60 279 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 GNB1LQ9BYB4 327 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 NDUFA4L2Q9NRX3 87 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 WASHC3Q9Y3C0 194 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 YTHDF2Q9Y5A9 579 aaKnown RBP7.23□□□□□ -1.25
HDAC3-202ENST00000459727 DNAJC13O75165 2243 aa7.23□□□□□ -1.25
HDAC3-202ENST00000459727 CHD3Q12873 2000 aaKnown RBP7.22□□□□□ -1.25
HDAC3-202ENST00000459727 H0YJW9 148 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 TMEM178BH3BS89 294 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 OR7C2O60412 319 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 RBP4P02753 201 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 OR4A8P0C604 315 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 C1QTNF9P0C862 333 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 LINC00869P0C866 280 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 GZMBP10144 247 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 ESDP10768 282 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 BMP5P22003 454 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 LINC00205P59089 165 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 TPPP2P59282 170 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 ERVFC1-1P60608 527 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 PAX2Q02962 417 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 GAMTQ14353 236 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 PSG5Q15238 335 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 ADIPOQQ15848 244 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 ALKBH2Q6NS38 261 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 FAM216BQ8N7L0 139 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 OR9G1Q8NH87 305 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 PLPPR2Q96GM1 343 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 RBM14Q96PK6 669 aaKnown RBP7.22□□□□□ -1.25
HDAC3-202ENST00000459727 ZNF430Q9H8G1 570 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-202ENST00000459727 SEPSECSQ9HD40 501 aaKnown RBP7.22□□□□□ -1.25
HDAC3-202ENST00000459727 JKAMPQ9P055 326 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 SSUH2Q9Y2M2 353 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 NBEAQ8NFP9 2946 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 MED13Q9UHV7 2174 aa7.22□□□□□ -1.25
HDAC3-202ENST00000459727 AHCTF1Q8WYP5 2266 aa7.21□□□□□ -1.25
HDAC3-202ENST00000459727 KLK10O43240 276 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 COX7A2P2O60397 106 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 HLA-DQA1P01909 254 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 OR10J1P30954 320 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 RAB4BP61018 213 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 FAM27E3Q08E93 113 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 Q0VG73 95 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 CENPWQ5EE01 88 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 WFDC8Q8IUA0 241 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 TEX45Q8NA69 505 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 THAP8Q8NA92 274 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 ZNF114Q8NC26 417 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 DEFB108BQ8NET1 73 aa7.21□□□□□ -1.26
HDAC3-202ENST00000459727 OR5T1Q8NG75 326 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms