RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 HES1Q14469 280 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 PSG5Q15238 335 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 MMDQ15546 238 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 SSX2Q16385 188 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 OR8G2PQ6IF36 304 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 SLC24A4Q8NFF2 622 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 CFHR4Q92496 578 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 SRSF8Q9BRL6 282 aaKnown RBP7.18□□□□□ -1.26
VPS50-207ENST00000458530 HINT2Q9BX68 163 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 REG4Q9BYZ8 158 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 ZNF430Q9H8G1 570 aaPredicted RBP7.18□□□□□ -1.26
VPS50-207ENST00000458530 KCNIP2Q9NS61 270 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 UQCC1Q9NVA1 299 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 METTL1Q9UBP6 276 aaKnown RBP7.18□□□□□ -1.26
VPS50-207ENST00000458530 TENM1Q9UKZ4 2725 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 TRAV3A0A0B4J244 114 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 IGHV1-69DA0A0B4J2H0 117 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 TEX50A0A1B0GTY4 177 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 A0A1W2PRD5 423 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 A0A1W2PRF3 423 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 A0A1W2PRM7 423 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 UMAD1C9J7I0 102 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 FNDC10F2Z333 226 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 TRIM77I1YAP6 450 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 RRHO14718 337 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 MPDU1O75352 247 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 IGKV1D-33P01593 117 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 IGKV1-33P01594 117 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 IGHV1-69P01742 117 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 IFNA4P05014 189 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 SNRNP70P08621 437 aaKnown RBP7.17□□□□□ -1.26
VPS50-207ENST00000458530 RPL27AP46776 148 aaKnown RBP7.17□□□□□ -1.26
VPS50-207ENST00000458530 COMPP49747 757 aaPredicted RBP7.17□□□□□ -1.26
VPS50-207ENST00000458530 BLOC1S1P78537 153 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 DLK1P80370 383 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 PRB3Q04118 309 aaPredicted RBP7.17□□□□□ -1.26
VPS50-207ENST00000458530 PRSS8Q16651 343 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 SPINK9Q5DT21 86 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 ETV3LQ6ZN32 361 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 LHFPL4Q7Z7J7 247 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 PPP1R27Q86WC6 154 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 THNSL2Q86YJ6 484 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 Q8N3U1 123 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 TEX29Q8N6K0 151 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 MAPK1IP1LQ8NDC0 245 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 TMED6Q8WW62 240 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 SAT2Q96F10 170 aaPredicted RBP7.17□□□□□ -1.26
VPS50-207ENST00000458530 OR4C12Q96R67 309 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 C7orf69Q9H7B7 122 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 HIF1ANQ9NWT6 349 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 TMEM160Q9NX00 188 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 SIGLEC9Q9Y336 463 aa7.17□□□□□ -1.26
VPS50-207ENST00000458530 TRAV40A0A0B4J280 105 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 CENPVL3A0A0U1RRI6 287 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 RPS10-NUDT3A0A1W2PQS6 291 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 LINC00862A6NCI5 91 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 C15orf62A8K5M9 175 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 NUDT19A8MXV4 375 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 C17orf112F2Z3M2 114 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 CORTO00230 105 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 CYB5BO43169 146 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 FBXO24O75426 580 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 NDUFA3O95167 84 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 SPP1P10451 314 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 TMEM11P17152 192 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 SULT1A2P50226 295 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 EBI3Q14213 229 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 TNXAQ16473 311 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 C2orf83Q53S99 150 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 DPPA3Q6W0C5 159 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 ZNF709Q8N972 641 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 HSD17B11Q8NBQ5 300 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 NPBQ8NG41 125 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 EAF1Q96JC9 268 aaPredicted RBP7.16□□□□□ -1.26
VPS50-207ENST00000458530 PSMG3Q9BT73 122 aaPredicted RBP7.16□□□□□ -1.26
VPS50-207ENST00000458530 C19orf24Q9BVV8 132 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 WFDC1Q9HC57 220 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 NDUFA4L2Q9NRX3 87 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 MED9Q9NWA0 146 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 FAM96BQ9Y3D0 163 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 TIMM9Q9Y5J7 89 aa7.16□□□□□ -1.26
VPS50-207ENST00000458530 UBE2L5PA0A1B0GUS4 154 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 ZNF705EA8MWA4 302 aaPredicted RBP7.15□□□□□ -1.26
VPS50-207ENST00000458530 TEX46H3BTG2 121 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 ATP6V1G1O75348 118 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 CNIH1O95406 144 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 PRH1P02810 166 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 CRYGBP07316 175 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 NMBP08949 121 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 FBP1P09467 338 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 S100A1P23297 94 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 ATP6V0CP27449 155 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 RAB2AP61019 212 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 SERF2P84101 59 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 RAB31Q13636 194 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 VWC2Q2TAL6 325 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 LRRC75BQ2VPJ9 315 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 AKR1C8PQ5T2L2 129 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 OR1L6Q8NGR2 347 aa7.15□□□□□ -1.26
VPS50-207ENST00000458530 OR2G3Q8NGZ4 309 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms