RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 SCARB1Q8WTV0 552 aa10.49□□□□□ -0.73
UPF3AP2-201ENST00000457924 CMTM3Q96MX0 182 aa10.49□□□□□ -0.73
UPF3AP2-201ENST00000457924 RHPN1-AS1Q9BWJ2 59 aa10.49□□□□□ -0.73
UPF3AP2-201ENST00000457924 RYR1P21817 5038 aa10.49□□□□□ -0.73
UPF3AP2-201ENST00000457924 IGKV3-7A0A075B6H7 116 aa10.48□□□□□ -0.73
UPF3AP2-201ENST00000457924 IGHV7-4-1A0A0J9YVY3 117 aa10.48□□□□□ -0.73
UPF3AP2-201ENST00000457924 EBAG9O00559 213 aa10.48□□□□□ -0.73
UPF3AP2-201ENST00000457924 SCGNO76038 276 aa10.48□□□□□ -0.73
UPF3AP2-201ENST00000457924 CA1P00915 261 aaPredicted RBP10.48□□□□□ -0.73
UPF3AP2-201ENST00000457924 FCGR2CP31995 323 aa10.48□□□□□ -0.73
UPF3AP2-201ENST00000457924 WT1-ASQ06250 92 aa10.48□□□□□ -0.73
UPF3AP2-201ENST00000457924 F11RQ9Y624 299 aaKnown RBP10.48□□□□□ -0.73
UPF3AP2-201ENST00000457924 TEX50A0A1B0GTY4 177 aa10.47□□□□□ -0.73
UPF3AP2-201ENST00000457924 SSX5O60225 188 aa10.47□□□□□ -0.73
UPF3AP2-201ENST00000457924 PPYP01298 95 aa10.47□□□□□ -0.73
UPF3AP2-201ENST00000457924 MED14OSP0DP75 135 aa10.47□□□□□ -0.73
UPF3AP2-201ENST00000457924 PAFAH1B2P68402 229 aa10.47□□□□□ -0.73
UPF3AP2-201ENST00000457924 RELQ04864 619 aaPredicted RBP10.47□□□□□ -0.73
UPF3AP2-201ENST00000457924 PRSS48Q7RTY5 328 aa10.47□□□□□ -0.73
UPF3AP2-201ENST00000457924 OR1L8Q8NGR8 309 aa10.47□□□□□ -0.73
UPF3AP2-201ENST00000457924 LSM10Q969L4 123 aaKnown RBP10.47□□□□□ -0.73
UPF3AP2-201ENST00000457924 HINT2Q9BX68 163 aa10.47□□□□□ -0.73
UPF3AP2-201ENST00000457924 SLC5A7Q9GZV3 580 aa10.47□□□□□ -0.73
UPF3AP2-201ENST00000457924 PLEKHA2Q9HB19 425 aa10.47□□□□□ -0.73
UPF3AP2-201ENST00000457924 TRDV1A0A1B0GX56 115 aa10.46□□□□□ -0.73
UPF3AP2-201ENST00000457924 NUPL2O15504 423 aaKnown RBP10.46□□□□□ -0.73
UPF3AP2-201ENST00000457924 YIF1AO95070 293 aa10.46□□□□□ -0.73
UPF3AP2-201ENST00000457924 CTSGP08311 255 aa10.46□□□□□ -0.73
UPF3AP2-201ENST00000457924 ERVK-16P61578 105 aa10.46□□□□□ -0.73
UPF3AP2-201ENST00000457924 AADACL3Q5VUY0 350 aa10.46□□□□□ -0.73
UPF3AP2-201ENST00000457924 ZNF773Q6PK81 442 aa10.46□□□□□ -0.73
UPF3AP2-201ENST00000457924 NR2C2APQ86WQ0 139 aa10.46□□□□□ -0.73
UPF3AP2-201ENST00000457924 GBGT1Q8N5D6 347 aa10.46□□□□□ -0.73
UPF3AP2-201ENST00000457924 BEST4Q8NFU0 473 aa10.46□□□□□ -0.73
UPF3AP2-201ENST00000457924 OR51H1Q8NH63 302 aa10.46□□□□□ -0.73
UPF3AP2-201ENST00000457924 HRH4Q9H3N8 390 aa10.46□□□□□ -0.73
UPF3AP2-201ENST00000457924 COMMD9Q9P000 198 aa10.46□□□□□ -0.73
UPF3AP2-201ENST00000457924 IGHV3-49A0A0A0MS15 119 aa10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 TRAV14DV4A0A0A6YYC5 116 aa10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 SMIM30A4D0T7 59 aa10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 C15orf61A6NNL5 157 aa10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 K7EIM0 57 aa10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 PTHLHP12272 177 aa10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 FXYD4P59646 89 aa10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 C22orf42Q6IC83 251 aa10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 ZNF367Q7RTV3 350 aa10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 CENPSQ8N2Z9 138 aa10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 OR10C1Q96KK4 312 aa10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 NDUFA4L2Q9NRX3 87 aa10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 NDUFB11Q9NX14 153 aa10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 MUC4Q99102 2169 aa10.45□□□□□ -0.74
UPF3AP2-201ENST00000457924 A0A1B0GVY2 172 aa10.44□□□□□ -0.74
UPF3AP2-201ENST00000457924 MARCH11A6NNE9 402 aa10.44□□□□□ -0.74
UPF3AP2-201ENST00000457924 NOTOA8MTQ0 251 aa10.44□□□□□ -0.74
UPF3AP2-201ENST00000457924 CD5P06127 495 aa10.44□□□□□ -0.74
UPF3AP2-201ENST00000457924 EIF4EP06730 217 aaKnown RBP10.44□□□□□ -0.74
UPF3AP2-201ENST00000457924 TBCEQ15813 527 aaPredicted RBP10.44□□□□□ -0.74
UPF3AP2-201ENST00000457924 FAM90A2PQ658T7 463 aa10.44□□□□□ -0.74
UPF3AP2-201ENST00000457924 ZNF818PQ6ZRF7 136 aa10.44□□□□□ -0.74
UPF3AP2-201ENST00000457924 OR51B2Q9Y5P1 312 aa10.44□□□□□ -0.74
UPF3AP2-201ENST00000457924 IGHV4-4A0A075B6R2 117 aa10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 IGHV3OR16-13A0A075B7E8 117 aa10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 IGHV3-74A0A0B4J1X5 117 aa10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 TRAV10A0A0B4J240 114 aa10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 DNASE2O00115 360 aaPredicted RBP10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 SNAPC5O75971 98 aa10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 DFFBO76075 338 aa10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 HLA-DMBP28068 263 aa10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 LEMD1Q68G75 181 aa10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 TCF24Q7RTU0 167 aa10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 HOGA1Q86XE5 327 aa10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 Q8NAQ8 132 aa10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 BORCS5Q969J3 196 aa10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 DGCR14Q96DF8 476 aaKnown RBP10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 TMEM56Q96MV1 263 aa10.43□□□□□ -0.74
UPF3AP2-201ENST00000457924 PRSS29PA6NIE9 313 aa10.42□□□□□ -0.74
UPF3AP2-201ENST00000457924 MFAP4P55083 255 aa10.42□□□□□ -0.74
UPF3AP2-201ENST00000457924 DEFB131AP59861 70 aa10.42□□□□□ -0.74
UPF3AP2-201ENST00000457924 TMEM17Q86X19 198 aa10.42□□□□□ -0.74
UPF3AP2-201ENST00000457924 STHQ8IWL8 128 aa10.42□□□□□ -0.74
UPF3AP2-201ENST00000457924 OR1P1Q8NH06 330 aa10.42□□□□□ -0.74
UPF3AP2-201ENST00000457924 SLC25A46Q96AG3 418 aa10.42□□□□□ -0.74
UPF3AP2-201ENST00000457924 ZNF414Q96IQ9 312 aa10.42□□□□□ -0.74
UPF3AP2-201ENST00000457924 TXN2Q99757 166 aa10.42□□□□□ -0.74
UPF3AP2-201ENST00000457924 GINS3Q9BRX5 216 aa10.42□□□□□ -0.74
UPF3AP2-201ENST00000457924 NXF2Q9GZY0 626 aaKnown RBP10.42□□□□□ -0.74
UPF3AP2-201ENST00000457924 AP5S1Q9NUS5 200 aa10.42□□□□□ -0.74
UPF3AP2-201ENST00000457924 DAPK2Q9UIK4 370 aa10.42□□□□□ -0.74
UPF3AP2-201ENST00000457924 NSG2Q9Y328 171 aa10.42□□□□□ -0.74
UPF3AP2-201ENST00000457924 TRAV18A0A075B6X5 111 aa10.41□□□□□ -0.74
UPF3AP2-201ENST00000457924 IGHV4-28A0A0C4DH34 117 aa10.41□□□□□ -0.74
UPF3AP2-201ENST00000457924 ST8SIA3O43173 380 aa10.41□□□□□ -0.74
UPF3AP2-201ENST00000457924 KRASP01116 189 aa10.41□□□□□ -0.74
UPF3AP2-201ENST00000457924 RBMY1A1P0DJD3 496 aaKnown RBP10.41□□□□□ -0.74
UPF3AP2-201ENST00000457924 RBMY1CP0DJD4 496 aa10.41□□□□□ -0.74
UPF3AP2-201ENST00000457924 MIFP14174 115 aa10.41□□□□□ -0.74
UPF3AP2-201ENST00000457924 AQP4P55087 323 aa10.41□□□□□ -0.74
UPF3AP2-201ENST00000457924 RPL11P62913 178 aaKnown RBP10.41□□□□□ -0.74
UPF3AP2-201ENST00000457924 RBMY1FQ15415 496 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms