RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 ACOT13Q9NPJ3 140 aa16.82■□□□□ 0.28
PTPRA-208ENST00000455631 SCN3BQ9NY72 215 aa16.82■□□□□ 0.28
PTPRA-208ENST00000455631 PKD1P98161 4303 aa16.81■□□□□ 0.28
PTPRA-208ENST00000455631 TRAV14DV4A0A0A6YYC5 116 aa16.81■□□□□ 0.28
PTPRA-208ENST00000455631 FGF2P09038 288 aa16.81■□□□□ 0.28
PTPRA-208ENST00000455631 GNG2P59768 71 aa16.81■□□□□ 0.28
PTPRA-208ENST00000455631 OR1L8Q8NGR8 309 aa16.81■□□□□ 0.28
PTPRA-208ENST00000455631 GIMAP1Q8WWP7 306 aa16.81■□□□□ 0.28
PTPRA-208ENST00000455631 LSM10Q969L4 123 aaKnown RBP16.81■□□□□ 0.28
PTPRA-208ENST00000455631 ELOA3CA0A087WX78 387 aaPredicted RBP16.8■□□□□ 0.28
PTPRA-208ENST00000455631 TEX50A0A1B0GTY4 177 aa16.8■□□□□ 0.28
PTPRA-208ENST00000455631 DNASE2O00115 360 aaPredicted RBP16.8■□□□□ 0.28
PTPRA-208ENST00000455631 DFFBO76075 338 aa16.8■□□□□ 0.28
PTPRA-208ENST00000455631 MSMO1Q15800 293 aa16.8■□□□□ 0.28
PTPRA-208ENST00000455631 DEFB131BA0A096LNP1 70 aa16.79■□□□□ 0.28
PTPRA-208ENST00000455631 EIF4EP06730 217 aaKnown RBP16.79■□□□□ 0.28
PTPRA-208ENST00000455631 FCGR2CP31995 323 aa16.79■□□□□ 0.28
PTPRA-208ENST00000455631 LGALS9BQ3B8N2 356 aa16.79■□□□□ 0.28
PTPRA-208ENST00000455631 ZNF773Q6PK81 442 aa16.79■□□□□ 0.28
PTPRA-208ENST00000455631 ZNF767PQ75MW2 155 aa16.79■□□□□ 0.28
PTPRA-208ENST00000455631 ZBTB34Q8NCN2 500 aa16.79■□□□□ 0.28
PTPRA-208ENST00000455631 OR51H1Q8NH63 302 aa16.79■□□□□ 0.28
PTPRA-208ENST00000455631 MS4A6AQ9H2W1 248 aa16.79■□□□□ 0.28
PTPRA-208ENST00000455631 GIG44P09565 113 aaPredicted RBP16.78■□□□□ 0.28
PTPRA-208ENST00000455631 MYL9P24844 172 aa16.78■□□□□ 0.28
PTPRA-208ENST00000455631 ARPC4P59998 168 aa16.78■□□□□ 0.28
PTPRA-208ENST00000455631 ERVK-16P61578 105 aa16.78■□□□□ 0.28
PTPRA-208ENST00000455631 FAM24BQ8N5W8 94 aa16.78■□□□□ 0.28
PTPRA-208ENST00000455631 DGCR14Q96DF8 476 aaKnown RBP16.78■□□□□ 0.28
PTPRA-208ENST00000455631 NDUFAF3Q9BU61 184 aa16.78■□□□□ 0.28
PTPRA-208ENST00000455631 CCDC90BQ9GZT6 254 aa16.78■□□□□ 0.28
PTPRA-208ENST00000455631 SLC5A7Q9GZV3 580 aa16.78■□□□□ 0.28
PTPRA-208ENST00000455631 PLEKHA2Q9HB19 425 aa16.78■□□□□ 0.28
PTPRA-208ENST00000455631 NDUFA4L2Q9NRX3 87 aa16.78■□□□□ 0.28
PTPRA-208ENST00000455631 CELA1Q9UNI1 258 aa16.78■□□□□ 0.28
PTPRA-208ENST00000455631 X6R8D5 127 aa16.78■□□□□ 0.28
PTPRA-208ENST00000455631 TRAV1-2A0A0B4J238 106 aa16.77■□□□□ 0.28
PTPRA-208ENST00000455631 ZNF705EA8MWA4 302 aaPredicted RBP16.77■□□□□ 0.28
PTPRA-208ENST00000455631 ST8SIA3O43173 380 aa16.77■□□□□ 0.28
PTPRA-208ENST00000455631 SSX5O60225 188 aa16.77■□□□□ 0.28
PTPRA-208ENST00000455631 CD5P06127 495 aa16.77■□□□□ 0.28
PTPRA-208ENST00000455631 PTHLHP12272 177 aa16.77■□□□□ 0.28
PTPRA-208ENST00000455631 RAB3BP20337 219 aa16.77■□□□□ 0.28
PTPRA-208ENST00000455631 RPL11P62913 178 aaKnown RBP16.77■□□□□ 0.28
PTPRA-208ENST00000455631 TMEM41BQ5BJD5 291 aa16.77■□□□□ 0.28
PTPRA-208ENST00000455631 AADACL3Q5VUY0 350 aa16.77■□□□□ 0.28
PTPRA-208ENST00000455631 ST8SIA2Q92186 375 aa16.77■□□□□ 0.28
PTPRA-208ENST00000455631 COMMD9Q9P000 198 aa16.77■□□□□ 0.28
PTPRA-208ENST00000455631 PPYP01298 95 aa16.76■□□□□ 0.27
PTPRA-208ENST00000455631 C4BPBP20851 252 aa16.76■□□□□ 0.27
PTPRA-208ENST00000455631 FXYD4P59646 89 aa16.76■□□□□ 0.27
PTPRA-208ENST00000455631 SLC25A46Q96AG3 418 aa16.76■□□□□ 0.27
PTPRA-208ENST00000455631 MGLLQ99685 303 aa16.76■□□□□ 0.27
PTPRA-208ENST00000455631 AGRNO00468 2067 aa16.75■□□□□ 0.27
PTPRA-208ENST00000455631 IGLV2-18A0A075B6J9 118 aa16.75■□□□□ 0.27
PTPRA-208ENST00000455631 IGHV3-66A0A0C4DH42 116 aa16.75■□□□□ 0.27
PTPRA-208ENST00000455631 MARCH11A6NNE9 402 aa16.75■□□□□ 0.27
PTPRA-208ENST00000455631 SPP1P10451 314 aa16.75■□□□□ 0.27
PTPRA-208ENST00000455631 C12orf74Q32Q52 190 aa16.75■□□□□ 0.27
PTPRA-208ENST00000455631 MORN3Q6PF18 240 aaPredicted RBP16.75■□□□□ 0.27
PTPRA-208ENST00000455631 TRPT1Q86TN4 253 aaKnown RBP16.75■□□□□ 0.27
PTPRA-208ENST00000455631 MISP3Q96FF7 219 aa16.75■□□□□ 0.27
PTPRA-208ENST00000455631 GINS3Q9BRX5 216 aa16.75■□□□□ 0.27
PTPRA-208ENST00000455631 SCRT1Q9BWW7 348 aa16.75■□□□□ 0.27
PTPRA-208ENST00000455631 NXF2Q9GZY0 626 aaKnown RBP16.75■□□□□ 0.27
PTPRA-208ENST00000455631 RABAC1Q9UI14 185 aa16.75■□□□□ 0.27
PTPRA-208ENST00000455631 NSG2Q9Y328 171 aa16.75■□□□□ 0.27
PTPRA-208ENST00000455631 OR51B2Q9Y5P1 312 aa16.75■□□□□ 0.27
PTPRA-208ENST00000455631 HSPG2P98160 4391 aa16.74■□□□□ 0.27
PTPRA-208ENST00000455631 SMIM30A4D0T7 59 aa16.74■□□□□ 0.27
PTPRA-208ENST00000455631 CASQ2O14958 399 aaPredicted RBP16.74■□□□□ 0.27
PTPRA-208ENST00000455631 RGS10O43665 173 aa16.74■□□□□ 0.27
PTPRA-208ENST00000455631 MFAP4P55083 255 aa16.74■□□□□ 0.27
PTPRA-208ENST00000455631 ZNF818PQ6ZRF7 136 aa16.74■□□□□ 0.27
PTPRA-208ENST00000455631 BEST4Q8NFU0 473 aa16.74■□□□□ 0.27
PTPRA-208ENST00000455631 CLEC5AQ9NY25 188 aa16.74■□□□□ 0.27
PTPRA-208ENST00000455631 TBC1D24Q9ULP9 559 aa16.74■□□□□ 0.27
PTPRA-208ENST00000455631 TPRKBQ9Y3C4 175 aa16.74■□□□□ 0.27
PTPRA-208ENST00000455631 TRAV2A0A0B4J234 112 aa16.73■□□□□ 0.27
PTPRA-208ENST00000455631 IFNA10P01566 189 aa16.73■□□□□ 0.27
PTPRA-208ENST00000455631 APOHP02749 345 aaPredicted RBP16.73■□□□□ 0.27
PTPRA-208ENST00000455631 RCN1Q15293 331 aa16.73■□□□□ 0.27
PTPRA-208ENST00000455631 TMEM17Q86X19 198 aa16.73■□□□□ 0.27
PTPRA-208ENST00000455631 UBE2DNLQ8IWF7 75 aa16.73■□□□□ 0.27
PTPRA-208ENST00000455631 LILRB2Q8N423 598 aa16.73■□□□□ 0.27
PTPRA-208ENST00000455631 VSIRQ9H7M9 311 aa16.73■□□□□ 0.27
PTPRA-208ENST00000455631 IGHV3-48P01763 117 aa16.72■□□□□ 0.27
PTPRA-208ENST00000455631 SOHLH1Q5JUK2 328 aa16.72■□□□□ 0.27
PTPRA-208ENST00000455631 OGFRL1Q5TC84 451 aaPredicted RBP16.72■□□□□ 0.27
PTPRA-208ENST00000455631 DUSP18Q8NEJ0 188 aa16.72■□□□□ 0.27
PTPRA-208ENST00000455631 OR1P1Q8NH06 330 aa16.72■□□□□ 0.27
PTPRA-208ENST00000455631 TMEM56Q96MV1 263 aa16.72■□□□□ 0.27
PTPRA-208ENST00000455631 TMEM14BQ9NUH8 114 aa16.72■□□□□ 0.27
PTPRA-208ENST00000455631 KNCNA6PVL3 124 aa16.71■□□□□ 0.27
PTPRA-208ENST00000455631 I3L2K1 104 aa16.71■□□□□ 0.27
PTPRA-208ENST00000455631 GNG7O60262 68 aa16.71■□□□□ 0.27
PTPRA-208ENST00000455631 SNAPC5O75971 98 aa16.71■□□□□ 0.27
PTPRA-208ENST00000455631 SCGNO76038 276 aa16.71■□□□□ 0.27
PTPRA-208ENST00000455631 TXN2Q99757 166 aa16.71■□□□□ 0.27
PTPRA-208ENST00000455631 UBE2UQ5VVX9 321 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms