RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 TOR2AQ5JU69 321 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 TREML4Q6UXN2 200 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 TMEM182Q6ZP80 229 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 LINC01356Q8N9X3 169 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 THAP8Q8NA92 274 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 FAM213BQ8TBF2 198 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 ZNF48Q96MX3 618 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 MANBALQ9NQG1 85 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 IGHV1-69DA0A0B4J2H0 117 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 UBE2L5PA0A1B0GUS4 154 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 NDUFS7O75251 213 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 IGHV1-69P01742 117 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 HLA-DRB1P01911 266 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 HSPB1P04792 205 aaKnown RBP5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 PLA2G2AP14555 144 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 LCN2P80188 198 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 EAF1Q96JC9 268 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 SH3BGRL3Q9H299 93 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 HRH4Q9H3N8 390 aa5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 UBR5O95071 2799 aaPredicted RBP5.48□□□□□ -1.53
ECHDC1-210ENST00000454859 IGLC7A0M8Q6 106 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 NXPH3O95157 252 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 REG1BP48304 166 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 ZNF616Q08AN1 781 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 CLEC12BQ2HXU8 276 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 MRGPRG-AS1Q2M3A8 158 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 DEFB113Q30KQ7 82 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 ZNF506Q5JVG8 444 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 ZNF787Q6DD87 383 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 SVBPQ8N300 66 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 TMEM116Q8NCL8 245 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 PFDN5Q99471 154 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 MRPL32Q9BYC8 188 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 SIRT7Q9NRC8 400 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 GAR1Q9NY12 217 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 THYN1Q9P016 225 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 F11RQ9Y624 299 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 CFAP46Q8IYW2 2715 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 TRAV30A0A087WSZ9 112 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 IGHV4-61A0A0C4DH41 118 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 FCGR2BP31994 310 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 CRIP2P52943 208 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 RHOBP62745 196 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 DIAPH2-AS1Q14236 149 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 GUK1Q16774 197 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 FAM74A3Q4VXF1 159 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 FAM209BQ5JX69 171 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 FFAR4Q5NUL3 377 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 SLC16A13Q7RTY0 426 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 OR1L4Q8NGR5 311 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 GATAD1Q8WUU5 269 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 TMEM170AQ8WVE7 144 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 AJUBAQ96IF1 538 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 TRGV9Q99603 122 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 TXN2Q99757 166 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 RPRMQ9NS64 109 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 SLC39A9Q9NUM3 307 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 ZNRD1Q9P1U0 126 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 PITPNC1Q9UKF7 332 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 SLC45A2Q9UMX9 530 aa5.47□□□□□ -1.53
ECHDC1-210ENST00000454859 ELOA3CA0A087WX78 387 aaPredicted RBP5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 RBFOX3A6NFN3 312 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 IGKV1D-33P01593 117 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 IGKV1-33P01594 117 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 RNF224P0DH78 156 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 OR13C7P0DN81 318 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 TAS2R45P59539 299 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 PLP1P60201 277 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 PRR20EP86478 221 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 PRR20CP86479 221 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 PRR20DP86480 221 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 PRR20BP86481 221 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 PRR20AP86496 221 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 PLGLAQ15195 96 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 MMDQ15546 238 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 TUSC1Q2TAM9 212 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 SPSB3Q6PJ21 355 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 CLEC9AQ6UXN8 241 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 C9orf139Q6ZV77 190 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 TTC9CQ8N5M4 171 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 OR10G9Q8NGN4 311 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 OR10G7Q8NGN6 311 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 SRSF12Q8WXF0 261 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 RCC1LQ96I51 464 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 SSX3Q99909 188 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 TCEAL7Q9BRU2 100 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 GGTLC1Q9BX51 225 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 SLC35B3Q9H1N7 401 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 TNCP24821 2201 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 IGHV4-30-2A0A087WSY4 118 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 A0A096LNT2 108 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 CENPVL3A0A0U1RRI6 287 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 CGB1A6NKQ9 187 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 TEX22C9J3V5 150 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 FAM157AC9JC47 383 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 TMEM250H0YL14 139 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 AGPAT2O15120 278 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 SNAPINO95295 136 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 TMEM11P17152 192 aa5.46□□□□□ -1.54
ECHDC1-210ENST00000454859 SAA4P35542 130 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms