RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 C8orf86Q6ZUL3 223 aa11.35□□□□□ -0.59
NCKIPSD-207ENST00000453349 FAM223AQ8IWN6 122 aa11.35□□□□□ -0.59
NCKIPSD-207ENST00000453349 NECAP1Q8NC96 275 aa11.35□□□□□ -0.59
NCKIPSD-207ENST00000453349 ZNF431Q8TF32 576 aaPredicted RBP11.35□□□□□ -0.59
NCKIPSD-207ENST00000453349 MITD1Q8WV92 249 aa11.35□□□□□ -0.59
NCKIPSD-207ENST00000453349 OR5B12Q96R08 314 aa11.35□□□□□ -0.59
NCKIPSD-207ENST00000453349 GNB4Q9HAV0 340 aa11.35□□□□□ -0.59
NCKIPSD-207ENST00000453349 FBXL7Q9UJT9 491 aa11.35□□□□□ -0.59
NCKIPSD-207ENST00000453349 CEBPZOSA8MTT3 80 aa11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 INMT-MINDY4F8WBC2 141 aa11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 I3L521 148 aa11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 OR2J3O76001 311 aa11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 TSPAN15O95858 294 aa11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 IGHV3-11P01762 117 aa11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 LGALS1P09382 135 aaKnown RBP11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 SNCAP37840 140 aa11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 MYCNOSP40205 109 aa11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 SUB1P53999 127 aaKnown RBP eCLIP11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 RUNX1Q01196 453 aa11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 AARDQ4LEZ3 155 aa11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 PRR31Q5SQ13 230 aa11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 OR2C3Q8N628 320 aa11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 UXS1Q8NBZ7 420 aa11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 SEC22CQ9BRL7 303 aa11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 F11RQ9Y624 299 aaKnown RBP11.34□□□□□ -0.59
NCKIPSD-207ENST00000453349 INS-IGF2F8WCM5 200 aa11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 CCL24O00175 119 aa11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 PRAF2O60831 178 aa11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 ADAP1O75689 374 aa11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 NXPH3O95157 252 aa11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 DCTN2Q13561 401 aaKnown RBP11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 KLK9Q2XQG4 91 aa11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 PDLIM3Q53GG5 364 aaPredicted RBP11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 C19orf35Q6ZS72 473 aa11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 C12orf45Q8N5I9 185 aaPredicted RBP11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 OR11H1Q8NG94 326 aa11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 OR1N2Q8NGR9 330 aa11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 DPF1Q92782 380 aa11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 FANCD2OSQ96PS1 177 aa11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 MARVELD1Q9BSK0 173 aa11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 HIPK2Q9H2X6 1198 aa11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 KLK9Q9UKQ9 250 aa11.33□□□□□ -0.6
NCKIPSD-207ENST00000453349 IGLV11-55A0A075B6I3 123 aa11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 PTTG1O95997 202 aa11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 HSPB1P04792 205 aaKnown RBP11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 TNFRSF9Q07011 255 aa11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 C15orf32Q32M92 178 aa11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 FAM209BQ5JX69 171 aa11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 TREML4Q6UXN2 200 aa11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 OR1P1Q8NH06 330 aa11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 RAX2Q96IS3 184 aa11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 CXorf58Q96LI9 332 aa11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 P2RX4Q99571 388 aa11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 HEYLQ9NQ87 328 aaPredicted RBP11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 HSPB7Q9UBY9 170 aa11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 COL6A5A8TX70 2615 aa11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 PLXNB1O43157 2135 aa11.32□□□□□ -0.6
NCKIPSD-207ENST00000453349 ANKRD34BA5PLL1 514 aa11.31□□□□□ -0.6
NCKIPSD-207ENST00000453349 PITX3O75364 302 aa11.31□□□□□ -0.6
NCKIPSD-207ENST00000453349 MED6O75586 246 aa11.31□□□□□ -0.6
NCKIPSD-207ENST00000453349 NDUFB8O95169 186 aa11.31□□□□□ -0.6
NCKIPSD-207ENST00000453349 DEFA5Q01523 94 aa11.31□□□□□ -0.6
NCKIPSD-207ENST00000453349 ZNF616Q08AN1 781 aa11.31□□□□□ -0.6
NCKIPSD-207ENST00000453349 DEFB136Q30KP8 78 aa11.31□□□□□ -0.6
NCKIPSD-207ENST00000453349 ZNF343Q6P1L6 599 aa11.31□□□□□ -0.6
NCKIPSD-207ENST00000453349 ZNF114Q8NC26 417 aa11.31□□□□□ -0.6
NCKIPSD-207ENST00000453349 EEF1AKMT3Q96AZ1 226 aa11.31□□□□□ -0.6
NCKIPSD-207ENST00000453349 DUX3Q96PT4 197 aa11.31□□□□□ -0.6
NCKIPSD-207ENST00000453349 RBKSQ9H477 322 aa11.31□□□□□ -0.6
NCKIPSD-207ENST00000453349 RANGRFQ9HD47 186 aaPredicted RBP11.31□□□□□ -0.6
NCKIPSD-207ENST00000453349 PEF1Q9UBV8 284 aaKnown RBP11.31□□□□□ -0.6
NCKIPSD-207ENST00000453349 TRBV7-1A0A0A6YYK4 115 aa11.3□□□□□ -0.6
NCKIPSD-207ENST00000453349 SNRPGP15A8MWD9 76 aa11.3□□□□□ -0.6
NCKIPSD-207ENST00000453349 FAM90A26D6RGX4 464 aa11.3□□□□□ -0.6
NCKIPSD-207ENST00000453349 LINC01619G3V211 115 aa11.3□□□□□ -0.6
NCKIPSD-207ENST00000453349 OR8U8P0C7N1 319 aa11.3□□□□□ -0.6
NCKIPSD-207ENST00000453349 SPNP16150 400 aa11.3□□□□□ -0.6
NCKIPSD-207ENST00000453349 CD33P20138 364 aa11.3□□□□□ -0.6
NCKIPSD-207ENST00000453349 HTR2BP41595 481 aa11.3□□□□□ -0.6
NCKIPSD-207ENST00000453349 EXOSC2Q13868 293 aaKnown RBP11.3□□□□□ -0.6
NCKIPSD-207ENST00000453349 DTD1Q8TEA8 209 aa11.3□□□□□ -0.6
NCKIPSD-207ENST00000453349 MISP3Q96FF7 219 aa11.3□□□□□ -0.6
NCKIPSD-207ENST00000453349 C5orf51A6NDU8 294 aa11.29□□□□□ -0.6
NCKIPSD-207ENST00000453349 CORTO00230 105 aa11.29□□□□□ -0.6
NCKIPSD-207ENST00000453349 RGS21Q2M5E4 152 aa11.29□□□□□ -0.6
NCKIPSD-207ENST00000453349 IAH1Q2TAA2 248 aaPredicted RBP11.29□□□□□ -0.6
NCKIPSD-207ENST00000453349 ETV3LQ6ZN32 361 aa11.29□□□□□ -0.6
NCKIPSD-207ENST00000453349 NOXA1Q86UR1 476 aa11.29□□□□□ -0.6
NCKIPSD-207ENST00000453349 VN1R17PQ8TDU5 208 aa11.29□□□□□ -0.6
NCKIPSD-207ENST00000453349 GSKIPQ9P0R6 139 aa11.29□□□□□ -0.6
NCKIPSD-207ENST00000453349 DMRT1Q9Y5R6 373 aa11.29□□□□□ -0.6
NCKIPSD-207ENST00000453349 IGHV4OR15-8A0A075B7B6 117 aa11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 A0A087WW49 117 aa11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 MPTX1A8MV57 137 aa11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 FAM25EA8MYX2 175 aa11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 IFNA10P01566 189 aa11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 IGHV3-23P01764 117 aa11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 RNASE2P10153 161 aaKnown RBP11.28□□□□□ -0.6
NCKIPSD-207ENST00000453349 NKX2-1P43699 371 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms