RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 S100ZQ8WXG8 99 aa15.34■□□□□ 0.05
COL9A3-202ENST00000452372 DCUN1D4Q92564 292 aa15.34■□□□□ 0.05
COL9A3-202ENST00000452372 IL22RA2Q969J5 263 aa15.34■□□□□ 0.05
COL9A3-202ENST00000452372 ANXA3P12429 323 aa15.33■□□□□ 0.04
COL9A3-202ENST00000452372 EXOSC2Q13868 293 aaKnown RBP15.33■□□□□ 0.04
COL9A3-202ENST00000452372 Q6ZRM9 215 aa15.33■□□□□ 0.04
COL9A3-202ENST00000452372 DLX4Q92988 240 aaPredicted RBP15.33■□□□□ 0.04
COL9A3-202ENST00000452372 CCDC32Q9BV29 185 aa15.33■□□□□ 0.04
COL9A3-202ENST00000452372 DMRT1Q9Y5R6 373 aa15.33■□□□□ 0.04
COL9A3-202ENST00000452372 CYB5BO43169 146 aa15.32■□□□□ 0.04
COL9A3-202ENST00000452372 TRBV12-3P01733 135 aa15.32■□□□□ 0.04
COL9A3-202ENST00000452372 ZP3P21754 424 aa15.32■□□□□ 0.04
COL9A3-202ENST00000452372 HOXD3P31249 432 aaPredicted RBP15.32■□□□□ 0.04
COL9A3-202ENST00000452372 MECP2P51608 486 aaKnown RBP15.32■□□□□ 0.04
COL9A3-202ENST00000452372 KRTAP10-11P60412 298 aa15.32■□□□□ 0.04
COL9A3-202ENST00000452372 FAM209BQ5JX69 171 aa15.32■□□□□ 0.04
COL9A3-202ENST00000452372 THYN1Q9P016 225 aa15.32■□□□□ 0.04
COL9A3-202ENST00000452372 F11RQ9Y624 299 aaKnown RBP15.32■□□□□ 0.04
COL9A3-202ENST00000452372 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.31■□□□□ 0.04
COL9A3-202ENST00000452372 SEC14L6B5MCN3 397 aa15.31■□□□□ 0.04
COL9A3-202ENST00000452372 K7EIL1 84 aa15.31■□□□□ 0.04
COL9A3-202ENST00000452372 OVOL1O14753 267 aa15.31■□□□□ 0.04
COL9A3-202ENST00000452372 ST8SIA3O43173 380 aa15.31■□□□□ 0.04
COL9A3-202ENST00000452372 NDUFB6O95139 128 aa15.31■□□□□ 0.04
COL9A3-202ENST00000452372 SRPXP78539 464 aa15.31■□□□□ 0.04
COL9A3-202ENST00000452372 C9orf66Q5T8R8 295 aa15.31■□□□□ 0.04
COL9A3-202ENST00000452372 CENPSQ8N2Z9 138 aa15.31■□□□□ 0.04
COL9A3-202ENST00000452372 OR2C3Q8N628 320 aa15.31■□□□□ 0.04
COL9A3-202ENST00000452372 OR1L6Q8NGR2 347 aa15.31■□□□□ 0.04
COL9A3-202ENST00000452372 GPR146Q96CH1 333 aa15.31■□□□□ 0.04
COL9A3-202ENST00000452372 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.31■□□□□ 0.04
COL9A3-202ENST00000452372 PRR13Q9NZ81 148 aa15.31■□□□□ 0.04
COL9A3-202ENST00000452372 PLA2G10O15496 165 aa15.3■□□□□ 0.04
COL9A3-202ENST00000452372 BTCP35070 178 aa15.3■□□□□ 0.04
COL9A3-202ENST00000452372 AARDQ4LEZ3 155 aa15.3■□□□□ 0.04
COL9A3-202ENST00000452372 SLC25A24Q6NUK1 477 aa15.3■□□□□ 0.04
COL9A3-202ENST00000452372 LGI3Q8N145 548 aa15.3■□□□□ 0.04
COL9A3-202ENST00000452372 SLC35G3Q8N808 338 aa15.3■□□□□ 0.04
COL9A3-202ENST00000452372 CXorf58Q96LI9 332 aa15.3■□□□□ 0.04
COL9A3-202ENST00000452372 PDCD10Q9BUL8 212 aa15.3■□□□□ 0.04
COL9A3-202ENST00000452372 PLEKHA3Q9HB20 300 aa15.3■□□□□ 0.04
COL9A3-202ENST00000452372 A0A0B4J2A0 478 aa15.29■□□□□ 0.04
COL9A3-202ENST00000452372 PIGBOS1A0A0B4J2F0 54 aa15.29■□□□□ 0.04
COL9A3-202ENST00000452372 INS-IGF2F8WCM5 200 aa15.29■□□□□ 0.04
COL9A3-202ENST00000452372 IFNA17P01571 189 aa15.29■□□□□ 0.04
COL9A3-202ENST00000452372 MFAP2P55001 183 aa15.29■□□□□ 0.04
COL9A3-202ENST00000452372 UBE2MP61081 183 aaKnown RBP15.29■□□□□ 0.04
COL9A3-202ENST00000452372 ERHP84090 104 aaKnown RBP15.29■□□□□ 0.04
COL9A3-202ENST00000452372 EGFEM1PQ0D2K5 195 aa15.29■□□□□ 0.04
COL9A3-202ENST00000452372 KLF5Q13887 457 aaPredicted RBP15.29■□□□□ 0.04
COL9A3-202ENST00000452372 OR1P1Q8NH06 330 aa15.29■□□□□ 0.04
COL9A3-202ENST00000452372 EEF1AKMT3Q96AZ1 226 aa15.29■□□□□ 0.04
COL9A3-202ENST00000452372 SHPKQ9UHJ6 478 aa15.29■□□□□ 0.04
COL9A3-202ENST00000452372 TRBV7-1A0A0A6YYK4 115 aa15.28■□□□□ 0.04
COL9A3-202ENST00000452372 BMPR1BO00238 502 aa15.28■□□□□ 0.04
COL9A3-202ENST00000452372 VAMP1P23763 118 aa15.28■□□□□ 0.04
COL9A3-202ENST00000452372 INSL3P51460 131 aa15.28■□□□□ 0.04
COL9A3-202ENST00000452372 RPEL1Q2QD12 228 aa15.28■□□□□ 0.04
COL9A3-202ENST00000452372 LYZL2Q7Z4W2 148 aa15.28■□□□□ 0.04
COL9A3-202ENST00000452372 ZNF114Q8NC26 417 aa15.28■□□□□ 0.04
COL9A3-202ENST00000452372 OR52E5Q8NH55 327 aa15.28■□□□□ 0.04
COL9A3-202ENST00000452372 CACNG5Q9UF02 275 aa15.28■□□□□ 0.04
COL9A3-202ENST00000452372 S4R3C0 116 aa15.28■□□□□ 0.04
COL9A3-202ENST00000452372 NBEAL2Q6ZNJ1 2754 aa15.28■□□□□ 0.04
COL9A3-202ENST00000452372 WI2-2373I1.2A0A1W2PRP0 233 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 MFSD2BA6NFX1 497 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 LYRM1O43325 122 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 SFT2D2O95562 160 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 IGHV3-23P01764 117 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 SPCS3P61009 180 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 PPP1R1AQ13522 171 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 SPINK9Q5DT21 86 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 NMSQ5H8A3 153 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 ACSM6Q6P461 480 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 CLEC19AQ6UXS0 136 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 LRTM2Q8N967 370 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 VN1R17PQ8TDU5 208 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 CCDC140Q96MF4 163 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 FLVCR2Q9UPI3 526 aa15.27■□□□□ 0.04
COL9A3-202ENST00000452372 DUXBA0A1W2PPF3 345 aa15.26■□□□□ 0.03
COL9A3-202ENST00000452372 PPP5D1E7EU14 171 aa15.26■□□□□ 0.03
COL9A3-202ENST00000452372 SULT1A3P0DMM9 295 aa15.26■□□□□ 0.03
COL9A3-202ENST00000452372 SULT1A4P0DMN0 295 aa15.26■□□□□ 0.03
COL9A3-202ENST00000452372 ZNF846Q147U1 533 aa15.26■□□□□ 0.03
COL9A3-202ENST00000452372 TATDN3Q17R31 274 aa15.26■□□□□ 0.03
COL9A3-202ENST00000452372 ANKRD55Q3KP44 614 aa15.26■□□□□ 0.03
COL9A3-202ENST00000452372 WDR12Q9GZL7 423 aaKnown RBP15.26■□□□□ 0.03
COL9A3-202ENST00000452372 ZMAT5Q9UDW3 170 aaKnown RBP15.26■□□□□ 0.03
COL9A3-202ENST00000452372 CACFD1Q9UGQ2 172 aa15.26■□□□□ 0.03
COL9A3-202ENST00000452372 GGCTO75223 188 aaKnown RBP15.25■□□□□ 0.03
COL9A3-202ENST00000452372 CLEC3BP05452 202 aa15.25■□□□□ 0.03
COL9A3-202ENST00000452372 SYNJ2BPP57105 145 aa15.25■□□□□ 0.03
COL9A3-202ENST00000452372 ZNF502Q8TBZ5 544 aa15.25■□□□□ 0.03
COL9A3-202ENST00000452372 K7EIM0 57 aa15.24■□□□□ 0.03
COL9A3-202ENST00000452372 SAP30O75446 220 aa15.24■□□□□ 0.03
COL9A3-202ENST00000452372 SNCAP37840 140 aa15.24■□□□□ 0.03
COL9A3-202ENST00000452372 OR9G4Q8NGQ1 327 aa15.24■□□□□ 0.03
COL9A3-202ENST00000452372 ATP6V0BQ99437 205 aa15.24■□□□□ 0.03
COL9A3-202ENST00000452372 ELOVL1Q9BW60 279 aa15.24■□□□□ 0.03
COL9A3-202ENST00000452372 ENY2Q9NPA8 101 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms