RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 TSSC4Q9Y5U2 329 aaPredicted RBP9.27□□□□□ -0.93
LINC00339-205ENST00000452322 TRBV9A0A0B4J1U6 114 aa9.26□□□□□ -0.93
LINC00339-205ENST00000452322 CEBPZOSA8MTT3 80 aa9.26□□□□□ -0.93
LINC00339-205ENST00000452322 CCSO14618 274 aa9.26□□□□□ -0.93
LINC00339-205ENST00000452322 NXPH3O95157 252 aa9.26□□□□□ -0.93
LINC00339-205ENST00000452322 TRGV3P03979 118 aa9.26□□□□□ -0.93
LINC00339-205ENST00000452322 HIST1H1BP16401 226 aaKnown RBP9.26□□□□□ -0.93
LINC00339-205ENST00000452322 TPPP2P59282 170 aa9.26□□□□□ -0.93
LINC00339-205ENST00000452322 RPL23AP62750 156 aaKnown RBP9.26□□□□□ -0.93
LINC00339-205ENST00000452322 IAH1Q2TAA2 248 aaPredicted RBP9.26□□□□□ -0.93
LINC00339-205ENST00000452322 KHDC1LQ5JSQ8 128 aa9.26□□□□□ -0.93
LINC00339-205ENST00000452322 LCNL1Q6ZST4 164 aa9.26□□□□□ -0.93
LINC00339-205ENST00000452322 NDUFA11Q86Y39 141 aa9.26□□□□□ -0.93
LINC00339-205ENST00000452322 ZNF114Q8NC26 417 aa9.26□□□□□ -0.93
LINC00339-205ENST00000452322 OR1L6Q8NGR2 347 aa9.26□□□□□ -0.93
LINC00339-205ENST00000452322 OR10C1Q96KK4 312 aa9.26□□□□□ -0.93
LINC00339-205ENST00000452322 MS4A10Q96PG2 267 aa9.26□□□□□ -0.93
LINC00339-205ENST00000452322 F11RQ9Y624 299 aaKnown RBP9.26□□□□□ -0.93
LINC00339-205ENST00000452322 ALG5Q9Y673 324 aa9.26□□□□□ -0.93
LINC00339-205ENST00000452322 IGLV11-55A0A075B6I3 123 aa9.25□□□□□ -0.93
LINC00339-205ENST00000452322 CYB5BO43169 146 aa9.25□□□□□ -0.93
LINC00339-205ENST00000452322 SSNA1O43805 119 aa9.25□□□□□ -0.93
LINC00339-205ENST00000452322 MED6O75586 246 aa9.25□□□□□ -0.93
LINC00339-205ENST00000452322 PRH1P02810 166 aa9.25□□□□□ -0.93
LINC00339-205ENST00000452322 DEFA4P12838 97 aa9.25□□□□□ -0.93
LINC00339-205ENST00000452322 CDX1P47902 265 aaPredicted RBP9.25□□□□□ -0.93
LINC00339-205ENST00000452322 KIAA0141Q14154 515 aaPredicted RBP9.25□□□□□ -0.93
LINC00339-205ENST00000452322 HIST2H2BDQ6DRA6 164 aa9.25□□□□□ -0.93
LINC00339-205ENST00000452322 GSG1LQ6UXU4 331 aa9.25□□□□□ -0.93
LINC00339-205ENST00000452322 C19orf35Q6ZS72 473 aa9.25□□□□□ -0.93
LINC00339-205ENST00000452322 ZNF491Q8N8L2 437 aa9.25□□□□□ -0.93
LINC00339-205ENST00000452322 ZBTB8BQ8NAP8 495 aaPredicted RBP9.25□□□□□ -0.93
LINC00339-205ENST00000452322 OR4D5Q8NGN0 318 aa9.25□□□□□ -0.93
LINC00339-205ENST00000452322 OR1P1Q8NH06 330 aa9.25□□□□□ -0.93
LINC00339-205ENST00000452322 UBE2E2Q96LR5 201 aa9.25□□□□□ -0.93
LINC00339-205ENST00000452322 FANCD2OSQ96PS1 177 aa9.25□□□□□ -0.93
LINC00339-205ENST00000452322 A0A0G2JLM5 398 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 C13orf42A0A1B0GVH6 325 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 C5orf51A6NDU8 294 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 FAM223BA6NKX1 122 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 ADARB2-AS1A8MUL3 147 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 FAM25EA8MYX2 175 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 SNCAP37840 140 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 NKX2-1P43699 371 aaPredicted RBP9.24□□□□□ -0.93
LINC00339-205ENST00000452322 RHOGP84095 191 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 ID3Q02535 119 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 C2orf68Q2NKX9 166 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 BSXQ3C1V8 233 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 FAM223AQ8IWN6 122 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 NECAP1Q8NC96 275 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 DTD1Q8TEA8 209 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 USMG5Q96IX5 58 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 C2orf50Q96LR7 162 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 P2RX4Q99571 388 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 HIPK2Q9H2X6 1198 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 RBKSQ9H477 322 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 HEYLQ9NQ87 328 aaPredicted RBP9.24□□□□□ -0.93
LINC00339-205ENST00000452322 THYN1Q9P016 225 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 TRRAPQ9Y4A5 3859 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 GOSR2O14653 212 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 SYNGR2O43760 224 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 OR2J3O76001 311 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 HTR2BP41595 481 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 SUB1P53999 127 aaKnown RBP eCLIP9.24□□□□□ -0.93
LINC00339-205ENST00000452322 KLHL30-AS1Q8NEE0 82 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 C4orf3Q8WVX3 66 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 GSKIPQ9P0R6 139 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 DMRT1Q9Y5R6 373 aa9.24□□□□□ -0.93
LINC00339-205ENST00000452322 A0A1W2PRX2 142 aa9.23□□□□□ -0.93
LINC00339-205ENST00000452322 WRBO00258 174 aa9.23□□□□□ -0.93
LINC00339-205ENST00000452322 LY86O95711 162 aa9.23□□□□□ -0.93
LINC00339-205ENST00000452322 SCGB1D2O95969 90 aa9.23□□□□□ -0.93
LINC00339-205ENST00000452322 RNASE2P10153 161 aaKnown RBP9.23□□□□□ -0.93
LINC00339-205ENST00000452322 MFAP2P55001 183 aa9.23□□□□□ -0.93
LINC00339-205ENST00000452322 DEFA5Q01523 94 aa9.23□□□□□ -0.93
LINC00339-205ENST00000452322 NSUN5P1Q3KNT7 163 aa9.23□□□□□ -0.93
LINC00339-205ENST00000452322 PVRIGQ6DKI7 326 aa9.23□□□□□ -0.93
LINC00339-205ENST00000452322 SLC25A24Q6NUK1 477 aa9.23□□□□□ -0.93
LINC00339-205ENST00000452322 SLC24A4Q8NFF2 622 aa9.23□□□□□ -0.93
LINC00339-205ENST00000452322 CIB3Q96Q77 187 aaPredicted RBP9.23□□□□□ -0.93
LINC00339-205ENST00000452322 GNB4Q9HAV0 340 aa9.23□□□□□ -0.93
LINC00339-205ENST00000452322 FBXL7Q9UJT9 491 aa9.23□□□□□ -0.93
LINC00339-205ENST00000452322 U3KQ87 197 aa9.23□□□□□ -0.93
LINC00339-205ENST00000452322 NUDT19A8MXV4 375 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 I3L521 148 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 M0QZ24 198 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 CORTO00230 105 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 NDUFB8O95169 186 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 IGHV3-11P01762 117 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 LGALS1P09382 135 aaKnown RBP9.22□□□□□ -0.93
LINC00339-205ENST00000452322 NPY1RP25929 384 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 ATP5IP56385 69 aaPredicted RBP9.22□□□□□ -0.93
LINC00339-205ENST00000452322 POLR2GP62487 172 aaKnown RBP eCLIP9.22□□□□□ -0.93
LINC00339-205ENST00000452322 RUNX1Q01196 453 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 ATP5G2Q06055 141 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 IL15RAQ13261 267 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 C15orf32Q32M92 178 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 C2orf83Q53S99 150 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 C18orf65Q6ZTR6 163 aa9.22□□□□□ -0.93
LINC00339-205ENST00000452322 C8orf86Q6ZUL3 223 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms