RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 RRNAD1Q96FB5 475 aaKnown RBP11.18□□□□□ -0.62
USP39-206ENST00000448971 PDCD10Q9BUL8 212 aa11.18□□□□□ -0.62
USP39-206ENST00000448971 NDUFA4L2Q9NRX3 87 aa11.18□□□□□ -0.62
USP39-206ENST00000448971 TMEM14BQ9NUH8 114 aa11.18□□□□□ -0.62
USP39-206ENST00000448971 THYN1Q9P016 225 aa11.18□□□□□ -0.62
USP39-206ENST00000448971 GPR132Q9UNW8 380 aa11.18□□□□□ -0.62
USP39-206ENST00000448971 S4R3C0 116 aa11.18□□□□□ -0.62
USP39-206ENST00000448971 HUWE1Q7Z6Z7 4374 aaKnown RBP11.17□□□□□ -0.62
USP39-206ENST00000448971 IGLV11-55A0A075B6I3 123 aa11.17□□□□□ -0.62
USP39-206ENST00000448971 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.17□□□□□ -0.62
USP39-206ENST00000448971 NDUFB8O95169 186 aa11.17□□□□□ -0.62
USP39-206ENST00000448971 IGKV1-5P01602 117 aa11.17□□□□□ -0.62
USP39-206ENST00000448971 INSL3P51460 131 aa11.17□□□□□ -0.62
USP39-206ENST00000448971 SYNJ2BPP57105 145 aa11.17□□□□□ -0.62
USP39-206ENST00000448971 WT1-ASQ06250 92 aa11.17□□□□□ -0.62
USP39-206ENST00000448971 IZUMO4Q1ZYL8 232 aa11.17□□□□□ -0.62
USP39-206ENST00000448971 FANCD2OSQ96PS1 177 aa11.17□□□□□ -0.62
USP39-206ENST00000448971 OR4C12Q96R67 309 aa11.17□□□□□ -0.62
USP39-206ENST00000448971 ELOVL1Q9BW60 279 aa11.17□□□□□ -0.62
USP39-206ENST00000448971 TMEM222Q9H0R3 208 aa11.17□□□□□ -0.62
USP39-206ENST00000448971 TNCP24821 2201 aa11.16□□□□□ -0.62
USP39-206ENST00000448971 LY86O95711 162 aa11.16□□□□□ -0.62
USP39-206ENST00000448971 AKR1C4P17516 323 aa11.16□□□□□ -0.62
USP39-206ENST00000448971 DHODHQ02127 395 aa11.16□□□□□ -0.62
USP39-206ENST00000448971 TMEM268Q5VZI3 342 aa11.16□□□□□ -0.62
USP39-206ENST00000448971 TMED4Q7Z7H5 227 aa11.16□□□□□ -0.62
USP39-206ENST00000448971 ZNF429Q86V71 674 aa11.16□□□□□ -0.62
USP39-206ENST00000448971 SLC35G3Q8N808 338 aa11.16□□□□□ -0.62
USP39-206ENST00000448971 DEDD2Q8WXF8 326 aa11.16□□□□□ -0.62
USP39-206ENST00000448971 RBPMSQ93062 196 aaKnown RBP11.16□□□□□ -0.62
USP39-206ENST00000448971 CXorf58Q96LI9 332 aa11.16□□□□□ -0.62
USP39-206ENST00000448971 CCDC140Q96MF4 163 aa11.16□□□□□ -0.62
USP39-206ENST00000448971 PLEKHA3Q9HB20 300 aa11.16□□□□□ -0.62
USP39-206ENST00000448971 F11RQ9Y624 299 aaKnown RBP11.16□□□□□ -0.62
USP39-206ENST00000448971 RYR2Q92736 4967 aa11.16□□□□□ -0.62
USP39-206ENST00000448971 SACSQ9NZJ4 4579 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 MFSD2BA6NFX1 497 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 A6NHS1 94 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 PPP5D1E7EU14 171 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 BMPR1BO00238 502 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 NHLRC4P0CG21 123 aaPredicted RBP11.15□□□□□ -0.62
USP39-206ENST00000448971 ANXA3P12429 323 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 ARL3P36405 182 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 HOXA1P49639 335 aaPredicted RBP11.15□□□□□ -0.62
USP39-206ENST00000448971 PRCDQ00LT1 54 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 TATDN3Q17R31 274 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 SPINK9Q5DT21 86 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 SLC25A24Q6NUK1 477 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 ACSM6Q6P461 480 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 CLEC19AQ6UXS0 136 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 OR9G4Q8NGQ1 327 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 TMEM230Q96A57 120 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 KCNIP3Q9Y2W7 256 aa11.15□□□□□ -0.62
USP39-206ENST00000448971 A0A0G2JRQ6 117 aa11.14□□□□□ -0.63
USP39-206ENST00000448971 IFNA17P01571 189 aa11.14□□□□□ -0.63
USP39-206ENST00000448971 HSPE1P61604 102 aaKnown RBP11.14□□□□□ -0.63
USP39-206ENST00000448971 DCTN2Q13561 401 aaKnown RBP11.14□□□□□ -0.63
USP39-206ENST00000448971 KLF5Q13887 457 aaPredicted RBP11.14□□□□□ -0.63
USP39-206ENST00000448971 FAM219AQ8IW50 185 aa11.14□□□□□ -0.63
USP39-206ENST00000448971 OR1L6Q8NGR2 347 aa11.14□□□□□ -0.63
USP39-206ENST00000448971 LHFPL5Q8TAF8 219 aa11.14□□□□□ -0.63
USP39-206ENST00000448971 GLYATL2Q8WU03 294 aa11.14□□□□□ -0.63
USP39-206ENST00000448971 PRR25Q96S07 402 aa11.14□□□□□ -0.63
USP39-206ENST00000448971 PRR13Q9NZ81 148 aa11.14□□□□□ -0.63
USP39-206ENST00000448971 PEMTQ9UBM1 199 aa11.14□□□□□ -0.63
USP39-206ENST00000448971 LSM4Q9Y4Z0 139 aaKnown RBP11.14□□□□□ -0.63
USP39-206ENST00000448971 DMRT1Q9Y5R6 373 aa11.14□□□□□ -0.63
USP39-206ENST00000448971 U3KQK5 164 aa11.14□□□□□ -0.63
USP39-206ENST00000448971 DNAH7Q8WXX0 4024 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 TRBV7-1A0A0A6YYK4 115 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 LINC00854A0A1B0GVQ3 168 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 ST8SIA3O43173 380 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 GGCTO75223 188 aaKnown RBP11.13□□□□□ -0.63
USP39-206ENST00000448971 CDS2O95674 445 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 HLA-AP01891 365 aaKnown RBP11.13□□□□□ -0.63
USP39-206ENST00000448971 P0C879 139 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 GPR183P32249 361 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 BAK1Q16611 211 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 KLK9Q2XQG4 91 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 HAPLN4Q86UW8 402 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 GALNT14Q96FL9 552 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 CITED4Q96RK1 184 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 ENY2Q9NPA8 101 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 ZC4H2Q9NQZ6 224 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 KLK9Q9UKQ9 250 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 ZNF256Q9Y2P7 627 aaPredicted RBP11.13□□□□□ -0.63
USP39-206ENST00000448971 SORL1Q92673 2214 aa11.13□□□□□ -0.63
USP39-206ENST00000448971 IGHV3-21A0A0B4J1V1 117 aa11.12□□□□□ -0.63
USP39-206ENST00000448971 A0A0B4J293 547 aa11.12□□□□□ -0.63
USP39-206ENST00000448971 VAMP1P23763 118 aa11.12□□□□□ -0.63
USP39-206ENST00000448971 SRPXP78539 464 aa11.12□□□□□ -0.63
USP39-206ENST00000448971 ERHP84090 104 aaKnown RBP11.12□□□□□ -0.63
USP39-206ENST00000448971 TMEM187Q14656 261 aa11.12□□□□□ -0.63
USP39-206ENST00000448971 RBMS2Q15434 407 aaKnown RBP11.12□□□□□ -0.63
USP39-206ENST00000448971 SELENOHQ8IZQ5 122 aaKnown RBP11.12□□□□□ -0.63
USP39-206ENST00000448971 OR2C3Q8N628 320 aa11.12□□□□□ -0.63
USP39-206ENST00000448971 UBAC2Q8NBM4 344 aa11.12□□□□□ -0.63
USP39-206ENST00000448971 ZNF502Q8TBZ5 544 aa11.12□□□□□ -0.63
USP39-206ENST00000448971 IL22RA2Q969J5 263 aa11.12□□□□□ -0.63
USP39-206ENST00000448971 MISP3Q96FF7 219 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms