RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 TMEM17Q86X19 198 aa13.14□□□□□ -0.31
CHCHD3-203ENST00000448878 STHQ8IWL8 128 aa13.14□□□□□ -0.31
CHCHD3-203ENST00000448878 ATP6V0BQ99437 205 aa13.14□□□□□ -0.31
CHCHD3-203ENST00000448878 OR51B2Q9Y5P1 312 aa13.14□□□□□ -0.31
CHCHD3-203ENST00000448878 VPS13DQ5THJ4 4388 aa13.13□□□□□ -0.31
CHCHD3-203ENST00000448878 IGHV4-4A0A075B6R2 117 aa13.13□□□□□ -0.31
CHCHD3-203ENST00000448878 PRSS29PA6NIE9 313 aa13.13□□□□□ -0.31
CHCHD3-203ENST00000448878 K7EIM0 57 aa13.13□□□□□ -0.31
CHCHD3-203ENST00000448878 M0R2N4 97 aa13.13□□□□□ -0.31
CHCHD3-203ENST00000448878 SNAPC5O75971 98 aa13.13□□□□□ -0.31
CHCHD3-203ENST00000448878 HLA-DMBP28068 263 aa13.13□□□□□ -0.31
CHCHD3-203ENST00000448878 MSMO1Q15800 293 aa13.13□□□□□ -0.31
CHCHD3-203ENST00000448878 ZNF818PQ6ZRF7 136 aa13.13□□□□□ -0.31
CHCHD3-203ENST00000448878 TSPAN14Q8NG11 270 aa13.13□□□□□ -0.31
CHCHD3-203ENST00000448878 SLC25A46Q96AG3 418 aa13.13□□□□□ -0.31
CHCHD3-203ENST00000448878 MISP3Q96FF7 219 aa13.13□□□□□ -0.31
CHCHD3-203ENST00000448878 NDUFA4L2Q9NRX3 87 aa13.13□□□□□ -0.31
CHCHD3-203ENST00000448878 DAPK2Q9UIK4 370 aa13.13□□□□□ -0.31
CHCHD3-203ENST00000448878 TRAV10A0A0B4J240 114 aa13.12□□□□□ -0.31
CHCHD3-203ENST00000448878 TRDV1A0A1B0GX56 115 aa13.12□□□□□ -0.31
CHCHD3-203ENST00000448878 C15orf61A6NNL5 157 aa13.12□□□□□ -0.31
CHCHD3-203ENST00000448878 ST8SIA3O43173 380 aa13.12□□□□□ -0.31
CHCHD3-203ENST00000448878 KRASP01116 189 aa13.12□□□□□ -0.31
CHCHD3-203ENST00000448878 ZNF367Q7RTV3 350 aa13.12□□□□□ -0.31
CHCHD3-203ENST00000448878 TMEM56Q96MV1 263 aa13.12□□□□□ -0.31
CHCHD3-203ENST00000448878 TRAV18A0A075B6X5 111 aa13.11□□□□□ -0.31
CHCHD3-203ENST00000448878 IGHV4-28A0A0C4DH34 117 aa13.11□□□□□ -0.31
CHCHD3-203ENST00000448878 IGHV3-66A0A0C4DH42 116 aa13.11□□□□□ -0.31
CHCHD3-203ENST00000448878 MARCH11A6NNE9 402 aa13.11□□□□□ -0.31
CHCHD3-203ENST00000448878 NOTOA8MTQ0 251 aa13.11□□□□□ -0.31
CHCHD3-203ENST00000448878 IGHV3-48P01763 117 aa13.11□□□□□ -0.31
CHCHD3-203ENST00000448878 MFAP4P55083 255 aa13.11□□□□□ -0.31
CHCHD3-203ENST00000448878 Q6ZTC4 211 aa13.11□□□□□ -0.31
CHCHD3-203ENST00000448878 NDUFB11Q9NX14 153 aa13.11□□□□□ -0.31
CHCHD3-203ENST00000448878 COMMD9Q9P000 198 aa13.11□□□□□ -0.31
CHCHD3-203ENST00000448878 A0A1B0GVY2 172 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 GNG7O60262 68 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 FGF2P09038 288 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 RBMY1A1P0DJD3 496 aaKnown RBP13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 RBMY1CP0DJD4 496 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 G6PCP35575 357 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 LPAR6P43657 344 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 AQP4P55087 323 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 HERV-K104P61576 105 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 RBMY1FQ15415 496 aaKnown RBP13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 FAM90A2PQ658T7 463 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 TPRA1Q86W33 373 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 HOGA1Q86XE5 327 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 Q8NAQ8 132 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 LGALS14Q8TCE9 139 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 PINX1Q96BK5 328 aaKnown RBP13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 DGCR14Q96DF8 476 aaKnown RBP13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 OR10C1Q96KK4 312 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 GINS3Q9BRX5 216 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 MS4A6AQ9H2W1 248 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 HRH4Q9H3N8 390 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 RABAC1Q9UI14 185 aa13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 RRP15Q9Y3B9 282 aaKnown RBP13.1□□□□□ -0.31
CHCHD3-203ENST00000448878 DFFBO76075 338 aa13.09□□□□□ -0.31
CHCHD3-203ENST00000448878 RLN1P04808 185 aa13.09□□□□□ -0.31
CHCHD3-203ENST00000448878 TBCEQ15813 527 aaPredicted RBP13.09□□□□□ -0.31
CHCHD3-203ENST00000448878 PVRIGQ6DKI7 326 aa13.09□□□□□ -0.31
CHCHD3-203ENST00000448878 ST8SIA2Q92186 375 aa13.09□□□□□ -0.31
CHCHD3-203ENST00000448878 NXF2Q9GZY0 626 aaKnown RBP13.09□□□□□ -0.31
CHCHD3-203ENST00000448878 RHBDL2Q9NX52 303 aa13.09□□□□□ -0.31
CHCHD3-203ENST00000448878 APOHP02749 345 aaPredicted RBP13.08□□□□□ -0.32
CHCHD3-203ENST00000448878 CD5P06127 495 aa13.08□□□□□ -0.32
CHCHD3-203ENST00000448878 MIFP14174 115 aa13.08□□□□□ -0.32
CHCHD3-203ENST00000448878 F2RP25116 425 aa13.08□□□□□ -0.32
CHCHD3-203ENST00000448878 DUSP18Q8NEJ0 188 aa13.08□□□□□ -0.32
CHCHD3-203ENST00000448878 OR1P1Q8NH06 330 aa13.08□□□□□ -0.32
CHCHD3-203ENST00000448878 FCAMRQ8WWV6 532 aa13.08□□□□□ -0.32
CHCHD3-203ENST00000448878 BORCS5Q969J3 196 aa13.08□□□□□ -0.32
CHCHD3-203ENST00000448878 FKBP11Q9NYL4 201 aa13.08□□□□□ -0.32
CHCHD3-203ENST00000448878 RYR1P21817 5038 aa13.07□□□□□ -0.32
CHCHD3-203ENST00000448878 MEIS3P1A6NDR6 274 aa13.07□□□□□ -0.32
CHCHD3-203ENST00000448878 MT-CO2P00403 227 aa13.07□□□□□ -0.32
CHCHD3-203ENST00000448878 GNRHRP30968 328 aa13.07□□□□□ -0.32
CHCHD3-203ENST00000448878 ZNF767PQ75MW2 155 aa13.07□□□□□ -0.32
CHCHD3-203ENST00000448878 FAM24BQ8N5W8 94 aa13.07□□□□□ -0.32
CHCHD3-203ENST00000448878 OR5AP2Q8NGF4 316 aa13.07□□□□□ -0.32
CHCHD3-203ENST00000448878 TXN2Q99757 166 aa13.07□□□□□ -0.32
CHCHD3-203ENST00000448878 PRNDQ9UKY0 176 aa13.07□□□□□ -0.32
CHCHD3-203ENST00000448878 DEFB131BA0A096LNP1 70 aa13.06□□□□□ -0.32
CHCHD3-203ENST00000448878 PGLYRP1O75594 196 aaPredicted RBP13.06□□□□□ -0.32
CHCHD3-203ENST00000448878 P0DMU3 169 aa13.06□□□□□ -0.32
CHCHD3-203ENST00000448878 FAM231AP0DMU4 169 aa13.06□□□□□ -0.32
CHCHD3-203ENST00000448878 FAM231CP0DMU5 169 aa13.06□□□□□ -0.32
CHCHD3-203ENST00000448878 TOMM20LQ6UXN7 152 aa13.06□□□□□ -0.32
CHCHD3-203ENST00000448878 LILRB2Q8N423 598 aa13.06□□□□□ -0.32
CHCHD3-203ENST00000448878 POM121L12Q8N7R1 296 aa13.06□□□□□ -0.32
CHCHD3-203ENST00000448878 MOB3AQ96BX8 217 aa13.06□□□□□ -0.32
CHCHD3-203ENST00000448878 ZNF414Q96IQ9 312 aa13.06□□□□□ -0.32
CHCHD3-203ENST00000448878 RNF126Q9BV68 326 aa13.06□□□□□ -0.32
CHCHD3-203ENST00000448878 TXNL4BQ9NX01 149 aaKnown RBP13.06□□□□□ -0.32
CHCHD3-203ENST00000448878 CLEC5AQ9NY25 188 aa13.06□□□□□ -0.32
CHCHD3-203ENST00000448878 EHFQ9NZC4 300 aa13.06□□□□□ -0.32
CHCHD3-203ENST00000448878 ELOA3CA0A087WX78 387 aaPredicted RBP13.05□□□□□ -0.32
CHCHD3-203ENST00000448878 I3L2K1 104 aa13.05□□□□□ -0.32
CHCHD3-203ENST00000448878 SFXN4Q6P4A7 337 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms