RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 A0A0B4J293 547 aa9.66□□□□□ -0.86
PRPF40A-203ENST00000448428 C2orf70A6NJV1 201 aa9.66□□□□□ -0.86
PRPF40A-203ENST00000448428 CYB5BO43169 146 aa9.66□□□□□ -0.86
PRPF40A-203ENST00000448428 GPR183P32249 361 aa9.66□□□□□ -0.86
PRPF40A-203ENST00000448428 SURF2Q15527 256 aaPredicted RBP9.66□□□□□ -0.86
PRPF40A-203ENST00000448428 TRIM16LQ309B1 348 aa9.66□□□□□ -0.86
PRPF40A-203ENST00000448428 FAM106AQ4KMX7 169 aa9.66□□□□□ -0.86
PRPF40A-203ENST00000448428 OR2C3Q8N628 320 aa9.66□□□□□ -0.86
PRPF40A-203ENST00000448428 GLYATL2Q8WU03 294 aa9.66□□□□□ -0.86
PRPF40A-203ENST00000448428 ASCL2Q99929 193 aa9.66□□□□□ -0.86
PRPF40A-203ENST00000448428 PRRT1Q99946 306 aa9.66□□□□□ -0.86
PRPF40A-203ENST00000448428 V9GYH0 126 aa9.66□□□□□ -0.86
PRPF40A-203ENST00000448428 IGHV3-21A0A0B4J1V1 117 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 TEX13DA0A0J9YY54 714 aaPredicted RBP9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 ZNF320A2RRD8 509 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 ZNF701M0R085 212 aaPredicted RBP9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 B3GALNT1O75752 331 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 ATG12O94817 140 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 CDS2O95674 445 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 OR5AC1P0C628 307 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 NHLRC4P0CG21 123 aaPredicted RBP9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 FOLR2P14207 255 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 AKR1C2P52895 323 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 PRCDQ00LT1 54 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 DEFB114Q30KQ6 69 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 PLET1Q6UQ28 207 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 OR1L6Q8NGR2 347 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 SCARB1Q8WTV0 552 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 TMEM222Q9H0R3 208 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 SLC2A8Q9NY64 477 aa9.65□□□□□ -0.86
PRPF40A-203ENST00000448428 COL7A1Q02388 2944 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 IGHV3-35A0A0C4DH35 117 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 A0A0G2JRQ6 117 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 CRYM-AS1A6NIL9 109 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 K7EIM0 57 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 ST8SIA3O43173 380 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 TGOLN2O43493 480 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 CBLN1P23435 193 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 S100A5P33763 92 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 ZNF79Q15937 498 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 CD300EQ496F6 205 aaPredicted RBP9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 PYDC2Q56P42 97 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 SPINK9Q5DT21 86 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 LCN12Q6JVE5 192 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 UNQ9165/PRO28630Q6UXU0 137 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 Q6ZRM9 215 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 CCDC190Q86UF4 302 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 Q8N402 240 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 OR2K2Q8NGT1 345 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 OR1P1Q8NH06 330 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 LHFPL5Q8TAF8 219 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 RRNAD1Q96FB5 475 aaKnown RBP9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 NAA60Q9H7X0 242 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 MCUBQ9NWR8 336 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 SCP2D1Q9UJQ7 156 aa9.64□□□□□ -0.87
PRPF40A-203ENST00000448428 TMEM213A2RRL7 107 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 OR2T8A6NH00 312 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 ZNF785A8K8V0 405 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 A8MWP6 167 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 F8W735 103 aaPredicted RBP9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 FRMD6-AS1P0C7T7 363 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 ETV6P41212 452 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 ERHP84090 104 aaKnown RBP9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 DHODHQ02127 395 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 KLF9Q13886 244 aaPredicted RBP9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 TM4SF20Q53R12 229 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 SBSPONQ8IVN8 264 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 SELENOHQ8IZQ5 122 aaKnown RBP9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 ZNF114Q8NC26 417 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 DYNLRB2Q8TF09 96 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 CACNG8Q8WXS5 425 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 TRIM63Q969Q1 353 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 CHRDL1Q9BU40 450 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 PLEKHA3Q9HB20 300 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 C21orf62Q9NYP8 219 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 SELENOKQ9Y6D0 94 aa9.63□□□□□ -0.87
PRPF40A-203ENST00000448428 I3L2K1 104 aa9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 IFNA17P01571 189 aa9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 IGHV4-30-4P0DP06 118 aa9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 ADMP35318 185 aa9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 SGPP2Q8IWX5 399 aa9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 UBAC2Q8NBM4 344 aa9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 UXS1Q8NBZ7 420 aa9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 RNASE11Q8TAA1 199 aaKnown RBP9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 RBPMSQ93062 196 aaKnown RBP9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 TMEM230Q96A57 120 aa9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 MISP3Q96FF7 219 aa9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 BSCL2Q96G97 398 aaPredicted RBP9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 SCGB3A2Q96PL1 93 aa9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 ATP6V0BQ99437 205 aa9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 ZNF436Q9C0F3 470 aaPredicted RBP9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 C19orf73Q9NVV2 129 aa9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 TECRQ9NZ01 308 aaKnown RBP9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 U3KQK5 164 aa9.62□□□□□ -0.87
PRPF40A-203ENST00000448428 A8MZ25 164 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 INS-IGF2F8WCM5 200 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 IGHV3-48P01763 117 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 CTSGP08311 255 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 C8orf88P0DMB2 117 aa9.61□□□□□ -0.87
PRPF40A-203ENST00000448428 Q56UQ5 140 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms