RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 CALYQ9NYX4 217 aa7.64□□□□□ -1.19
NIPBL-202ENST00000448238 NKG7Q16617 165 aa7.64□□□□□ -1.19
NIPBL-202ENST00000448238 FBXW9Q5XUX1 488 aa7.64□□□□□ -1.19
NIPBL-202ENST00000448238 TEX45Q8NA69 505 aa7.64□□□□□ -1.19
NIPBL-202ENST00000448238 DUSP15Q9H1R2 295 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-202ENST00000448238 MRM2Q9UI43 246 aaKnown RBP7.64□□□□□ -1.19
NIPBL-202ENST00000448238 IGLV3-10A0A075B6K4 115 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 LIMS2Q7Z4I7 341 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 ZAR1Q86SH2 424 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 AQP3Q92482 292 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 DLEU1O43261 78 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 SS18Q15532 418 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 KLF17Q5JT82 389 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-202ENST00000448238 C8orf31Q8N9H6 132 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 OR9G1Q8NH87 305 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 CXCL16Q9H2A7 254 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 ATXN7O15265 892 aaPredicted RBP7.63□□□□□ -1.19
NIPBL-202ENST00000448238 GAGE7O76087 117 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 GAGE12FP0CL80 117 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 GAGE12GP0CL81 117 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 GAGE12IP0CL82 117 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 IGHV1-69-2A0A0G2JMI3 117 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 F8W1H4 67 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 EREGO14944 169 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 SNRPCP09234 159 aaKnown RBP7.63□□□□□ -1.19
NIPBL-202ENST00000448238 UCNP55089 124 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 IFITM3Q01628 133 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 FAM90A2PQ658T7 463 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 C17orf47Q8NEP4 570 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 TNFSF13O75888 250 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 TMEM202A6NGA9 273 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 IGHG4P01861 327 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 ERCC8Q13216 396 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 PRR13Q9NZ81 148 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 C21orf140B9A014 251 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 SERF1AO75920 110 aa7.63□□□□□ -1.19
NIPBL-202ENST00000448238 RGPD1P0DJD0 1748 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 A8MXK9 166 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 CNRIP1Q96F85 164 aaPredicted RBP7.62□□□□□ -1.19
NIPBL-202ENST00000448238 IDI2-AS1Q9NZ38 188 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 KNCNA6PVL3 124 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 AGFG2O95081 481 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 SRP19P09132 144 aaKnown RBP7.62□□□□□ -1.19
NIPBL-202ENST00000448238 WBP1LQ9NX94 342 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 GREB1Q4ZG55 1949 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 IGKV6-21A0A0C4DH24 114 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 KLK8O60259 260 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 C1QL1O75973 258 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 KLRD1Q13241 179 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 NKAPP1Q8N9T2 125 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 TCF19Q9Y242 345 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 VSIG10L2P0DP72 767 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 THSD4Q6ZMP0 1018 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 C1orf122Q6ZSJ8 110 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 WFDC6Q9BQY6 131 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 IGHV3OR15-7A0A075B7D8 119 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 PRRT4C9JH25 899 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 SAXO1Q8IYX7 474 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 TMEM170AQ8WVE7 144 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 IGKV1D-42A0A075B6H8 117 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 H3BQ85 93 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 RPL36AP83881 106 aaKnown RBP7.62□□□□□ -1.19
NIPBL-202ENST00000448238 MPV17L2Q567V2 206 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 RPL36ALQ969Q0 106 aaKnown RBP7.62□□□□□ -1.19
NIPBL-202ENST00000448238 JPT1Q9UK76 154 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 PTPRDP23468 1912 aa7.62□□□□□ -1.19
NIPBL-202ENST00000448238 ADAMTSL5Q6ZMM2 481 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 ZNF784Q8NCA9 323 aaPredicted RBP7.61□□□□□ -1.19
NIPBL-202ENST00000448238 ZNF205O95201 554 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 MYO18BQ8IUG5 2567 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 A0A1W2PQD3 144 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 J3KT08 172 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 SRFP11831 508 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 CXCL2P19875 107 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 TMEM174Q8WUU8 243 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 NPIPB3Q92617 1050 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 RIF1Q5UIP0 2472 aaKnown RBP7.61□□□□□ -1.19
NIPBL-202ENST00000448238 A0A0U1RRA0 63 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 COL9A1P20849 921 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 NPDC1Q9NQX5 325 aaPredicted RBP7.61□□□□□ -1.19
NIPBL-202ENST00000448238 CARHSP1Q9Y2V2 147 aaKnown RBP7.61□□□□□ -1.19
NIPBL-202ENST00000448238 LOC105371242A0A075B767 164 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 SIGLEC14Q08ET2 396 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 FOXC1Q12948 553 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 WFDC9Q8NEX5 89 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 PLA2G3Q9NZ20 509 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 FER1L4A9Z1Z3 1794 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 K7ESM1 405 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 TIAM2Q8IVF5 1701 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 NALCNQ8IZF0 1738 aa7.61□□□□□ -1.19
NIPBL-202ENST00000448238 FXYD1O00168 92 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 LIPT2A6NK58 231 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 CD300EQ496F6 205 aaPredicted RBP7.6□□□□□ -1.19
NIPBL-202ENST00000448238 PRIMA1Q86XR5 153 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 OSTCQ9NRP0 149 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 TM4SF1P30408 202 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 CCL7P80098 99 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 C3AR1Q16581 482 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 NHLRC3Q5JS37 347 aa7.6□□□□□ -1.19
NIPBL-202ENST00000448238 SMIM20Q8N5G0 67 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms