RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 AKR1C4P17516 323 aa11.32□□□□□ -0.6
HDAC4-204ENST00000446876 FAUP35544 74 aaKnown RBP11.32□□□□□ -0.6
HDAC4-204ENST00000446876 ARL3P36405 182 aa11.32□□□□□ -0.6
HDAC4-204ENST00000446876 PRCDQ00LT1 54 aa11.32□□□□□ -0.6
HDAC4-204ENST00000446876 BAK1Q16611 211 aa11.32□□□□□ -0.6
HDAC4-204ENST00000446876 ZNF57Q68EA5 555 aaPredicted RBP11.32□□□□□ -0.6
HDAC4-204ENST00000446876 IL34Q6ZMJ4 242 aa11.32□□□□□ -0.6
HDAC4-204ENST00000446876 HSD17B13Q7Z5P4 300 aaPredicted RBP11.32□□□□□ -0.6
HDAC4-204ENST00000446876 SELENOHQ8IZQ5 122 aaKnown RBP11.32□□□□□ -0.6
HDAC4-204ENST00000446876 TMEM56Q96MV1 263 aa11.32□□□□□ -0.6
HDAC4-204ENST00000446876 SDHCQ99643 169 aaPredicted RBP11.32□□□□□ -0.6
HDAC4-204ENST00000446876 ELOVL1Q9BW60 279 aa11.32□□□□□ -0.6
HDAC4-204ENST00000446876 ZNF256Q9Y2P7 627 aaPredicted RBP11.32□□□□□ -0.6
HDAC4-204ENST00000446876 SORL1Q92673 2214 aa11.32□□□□□ -0.6
HDAC4-204ENST00000446876 ST8SIA3O43173 380 aa11.31□□□□□ -0.6
HDAC4-204ENST00000446876 B3GALNT1O75752 331 aa11.31□□□□□ -0.6
HDAC4-204ENST00000446876 OR2C1O95371 312 aa11.31□□□□□ -0.6
HDAC4-204ENST00000446876 CDS2O95674 445 aa11.31□□□□□ -0.6
HDAC4-204ENST00000446876 EDN2P20800 178 aa11.31□□□□□ -0.6
HDAC4-204ENST00000446876 GPR183P32249 361 aa11.31□□□□□ -0.6
HDAC4-204ENST00000446876 HSPE1P61604 102 aaKnown RBP11.31□□□□□ -0.6
HDAC4-204ENST00000446876 TMEM268Q5VZI3 342 aa11.31□□□□□ -0.6
HDAC4-204ENST00000446876 Q6ZRM9 215 aa11.31□□□□□ -0.6
HDAC4-204ENST00000446876 SGPP2Q8IWX5 399 aa11.31□□□□□ -0.6
HDAC4-204ENST00000446876 ZNF502Q8TBZ5 544 aa11.31□□□□□ -0.6
HDAC4-204ENST00000446876 RRNAD1Q96FB5 475 aaKnown RBP11.31□□□□□ -0.6
HDAC4-204ENST00000446876 LINC00854A0A1B0GVQ3 168 aa11.3□□□□□ -0.6
HDAC4-204ENST00000446876 GGCTO75223 188 aaKnown RBP11.3□□□□□ -0.6
HDAC4-204ENST00000446876 ATG12O94817 140 aa11.3□□□□□ -0.6
HDAC4-204ENST00000446876 CSN3P07498 182 aa11.3□□□□□ -0.6
HDAC4-204ENST00000446876 SUPT4H1P63272 117 aaKnown RBP11.3□□□□□ -0.6
HDAC4-204ENST00000446876 DHODHQ02127 395 aa11.3□□□□□ -0.6
HDAC4-204ENST00000446876 TMEM187Q14656 261 aa11.3□□□□□ -0.6
HDAC4-204ENST00000446876 TRIQKQ629K1 86 aa11.3□□□□□ -0.6
HDAC4-204ENST00000446876 TMED4Q7Z7H5 227 aa11.3□□□□□ -0.6
HDAC4-204ENST00000446876 OR2C3Q8N628 320 aa11.3□□□□□ -0.6
HDAC4-204ENST00000446876 SLC35G3Q8N808 338 aa11.3□□□□□ -0.6
HDAC4-204ENST00000446876 RBPMSQ93062 196 aaKnown RBP11.3□□□□□ -0.6
HDAC4-204ENST00000446876 CXorf58Q96LI9 332 aa11.3□□□□□ -0.6
HDAC4-204ENST00000446876 SCGB3A2Q96PL1 93 aa11.3□□□□□ -0.6
HDAC4-204ENST00000446876 PLEKHA3Q9HB20 300 aa11.3□□□□□ -0.6
HDAC4-204ENST00000446876 THYN1Q9P016 225 aa11.3□□□□□ -0.6
HDAC4-204ENST00000446876 ZMAT5Q9UDW3 170 aaKnown RBP11.3□□□□□ -0.6
HDAC4-204ENST00000446876 TRBV7-1A0A0A6YYK4 115 aa11.29□□□□□ -0.6
HDAC4-204ENST00000446876 IGHV3-35A0A0C4DH35 117 aa11.29□□□□□ -0.6
HDAC4-204ENST00000446876 K7EIM0 57 aa11.29□□□□□ -0.6
HDAC4-204ENST00000446876 IFNA17P01571 189 aa11.29□□□□□ -0.6
HDAC4-204ENST00000446876 IGLV1-51P01701 117 aa11.29□□□□□ -0.6
HDAC4-204ENST00000446876 CLEC3BP05452 202 aa11.29□□□□□ -0.6
HDAC4-204ENST00000446876 CCR6P51684 374 aa11.29□□□□□ -0.6
HDAC4-204ENST00000446876 TATDN3Q17R31 274 aa11.29□□□□□ -0.6
HDAC4-204ENST00000446876 GPR146Q96CH1 333 aa11.29□□□□□ -0.6
HDAC4-204ENST00000446876 MISP3Q96FF7 219 aa11.29□□□□□ -0.6
HDAC4-204ENST00000446876 CACNG5Q9UF02 275 aa11.29□□□□□ -0.6
HDAC4-204ENST00000446876 OR2T8A6NH00 312 aa11.28□□□□□ -0.6
HDAC4-204ENST00000446876 CYB5BO43169 146 aa11.28□□□□□ -0.6
HDAC4-204ENST00000446876 NXPH3O95157 252 aa11.28□□□□□ -0.6
HDAC4-204ENST00000446876 INPP1P49441 399 aa11.28□□□□□ -0.6
HDAC4-204ENST00000446876 HOXA1P49639 335 aaPredicted RBP11.28□□□□□ -0.6
HDAC4-204ENST00000446876 FAM209BQ5JX69 171 aa11.28□□□□□ -0.6
HDAC4-204ENST00000446876 ADAMTSL5Q6ZMM2 481 aa11.28□□□□□ -0.6
HDAC4-204ENST00000446876 OR1P1Q8NH06 330 aa11.28□□□□□ -0.6
HDAC4-204ENST00000446876 VN1R17PQ8TDU5 208 aa11.28□□□□□ -0.6
HDAC4-204ENST00000446876 SCARB1Q8WTV0 552 aa11.28□□□□□ -0.6
HDAC4-204ENST00000446876 GALNT14Q96FL9 552 aa11.28□□□□□ -0.6
HDAC4-204ENST00000446876 PDCD10Q9BUL8 212 aa11.28□□□□□ -0.6
HDAC4-204ENST00000446876 SELENOKQ9Y6D0 94 aa11.28□□□□□ -0.6
HDAC4-204ENST00000446876 TMEM56-RWDD3S4R434 201 aa11.28□□□□□ -0.6
HDAC4-204ENST00000446876 F8W735 103 aaPredicted RBP11.27□□□□□ -0.61
HDAC4-204ENST00000446876 IGHV3-48P01763 117 aa11.27□□□□□ -0.61
HDAC4-204ENST00000446876 GP9P14770 177 aa11.27□□□□□ -0.61
HDAC4-204ENST00000446876 ERHP84090 104 aaKnown RBP11.27□□□□□ -0.61
HDAC4-204ENST00000446876 C11orf87Q6NUJ2 197 aa11.27□□□□□ -0.61
HDAC4-204ENST00000446876 FAM219AQ8IW50 185 aa11.27□□□□□ -0.61
HDAC4-204ENST00000446876 UBAC2Q8NBM4 344 aa11.27□□□□□ -0.61
HDAC4-204ENST00000446876 ZNF114Q8NC26 417 aa11.27□□□□□ -0.61
HDAC4-204ENST00000446876 CACNG8Q8WXS5 425 aa11.27□□□□□ -0.61
HDAC4-204ENST00000446876 C21orf62Q9NYP8 219 aa11.27□□□□□ -0.61
HDAC4-204ENST00000446876 PEMTQ9UBM1 199 aa11.27□□□□□ -0.61
HDAC4-204ENST00000446876 KCNIP3Q9Y2W7 256 aa11.27□□□□□ -0.61
HDAC4-204ENST00000446876 LSM4Q9Y4Z0 139 aaKnown RBP11.27□□□□□ -0.61
HDAC4-204ENST00000446876 ZNF320A2RRD8 509 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 IZUMO1RA6ND01 250 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 C2orf70A6NJV1 201 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 TGOLN2O43493 480 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 IL7P13232 177 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 CNPY1Q3B7I2 92 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 PLET1Q6UQ28 207 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 UNQ9165/PRO28630Q6UXU0 137 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 LYZL2Q7Z4W2 148 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 GPHB5Q86YW7 130 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 OR1L6Q8NGR2 347 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 DEDD2Q8WXF8 326 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 IL22RA2Q969J5 263 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 PINX1Q96BK5 328 aaKnown RBP11.26□□□□□ -0.61
HDAC4-204ENST00000446876 CHRDL1Q9BU40 450 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 DNAH9Q9NYC9 4486 aa11.26□□□□□ -0.61
HDAC4-204ENST00000446876 A6NHS1 94 aa11.25□□□□□ -0.61
HDAC4-204ENST00000446876 I3L2K1 104 aa11.25□□□□□ -0.61
HDAC4-204ENST00000446876 MT-CO2P00403 227 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms