RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 IGHG3P01860 377 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 FOXL2P58012 376 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 TAS2R60P59551 318 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 PRSS8Q16651 343 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 LINC01559Q495D7 138 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 TRBV7-1A0A0A6YYK4 115 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 IGHV1-18A0A0C4DH31 117 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 NAT1P18440 290 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 ZNF660Q6AZW8 331 aaPredicted RBP7.18□□□□□ -1.26
PTPN3-204ENST00000446349 ZNF818PQ6ZRF7 136 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 C9orf62Q8N4C0 152 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 OR52E5Q8NH55 327 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 ABCA4P78363 2273 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 POLEQ07864 2286 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 C7orf77A4D0Y5 90 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 HELZP42694 1942 aaKnown RBP7.18□□□□□ -1.26
PTPN3-204ENST00000446349 IFITM10A6NMD0 228 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 ZG16O60844 167 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 OR9G9P0C7N8 305 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 RPL29P47914 159 aaKnown RBP7.18□□□□□ -1.26
PTPN3-204ENST00000446349 OR11H4Q8NGC9 324 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 SRSF12Q8WXF0 261 aaKnown RBP7.18□□□□□ -1.26
PTPN3-204ENST00000446349 LINC01587Q99440 93 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 KIAA2026Q5HYC2 2103 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 TCF23Q7RTU1 214 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 OR11H7Q8NGC8 314 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 ZNF502Q8TBZ5 544 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 C12orf57Q99622 126 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 C5orf66Q9H5L9 145 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 PCNX2A6NKB5 2137 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 PLA2G10O15496 165 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 GCM2O75603 506 aaPredicted RBP7.18□□□□□ -1.26
PTPN3-204ENST00000446349 TMEM144Q7Z5S9 345 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 MDS2Q8NDY4 140 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 VGLL1Q99990 258 aa7.18□□□□□ -1.26
PTPN3-204ENST00000446349 TRAV14DV4A0A0A6YYC5 116 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 HLA-DRB1P01911 266 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 SOD3P08294 240 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 ZNF672Q499Z4 452 aaPredicted RBP7.17□□□□□ -1.26
PTPN3-204ENST00000446349 IGFL3Q6UXB1 125 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 OTORQ9NRC9 128 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 WNK2Q9Y3S1 2297 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 UPK2O00526 184 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 GPR183P32249 361 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 WDR82Q6UXN9 313 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 WBP1Q96G27 269 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 EAF1Q96JC9 268 aaPredicted RBP7.17□□□□□ -1.26
PTPN3-204ENST00000446349 C15orf61A6NNL5 157 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 NBL1P41271 181 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 C12orf54Q6X4T0 127 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 FLVCR1-AS1Q8TAF5 88 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 ST6GAL2Q96JF0 529 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 GVINP1Q7Z2Y8 2422 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 HBBP68871 147 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 RTN4RQ9BZR6 473 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 TRGV2A0A075B6R0 118 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 TRAV21A0A0B4J279 112 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 DNAL4O96015 105 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 SRD5A1P18405 259 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 GCHFRP30047 84 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 NEU1Q99519 415 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 PHF3Q92576 2039 aaKnown RBP7.17□□□□□ -1.26
PTPN3-204ENST00000446349 A0A0G2JMM0 328 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 A0A1W2PPB8 328 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 A0A1W2PRS3 328 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 KIR3DP1A8MWS1 328 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 J3QKU1 62 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 CA2P00918 260 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 CTSBP07858 339 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 GOLT1AQ6ZVE7 132 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 MYLKQ15746 1914 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 TRBV6-7A0A0A0MS04 114 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 AMBPP02760 352 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 CXCL3P19876 107 aa7.17□□□□□ -1.26
PTPN3-204ENST00000446349 MCRIP2Q9BUT9 160 aaKnown RBP7.17□□□□□ -1.26
PTPN3-204ENST00000446349 FAM223BA6NKX1 122 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 RRHO14718 337 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 CDKN1AP38936 164 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 ZNF79Q15937 498 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 MEIG1Q5JSS6 88 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 FAM223AQ8IWN6 122 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 SMIM12Q96EX1 92 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 SRRM5B3KS81 715 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 MORN2Q502X0 79 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 NHLRC3Q5JS37 347 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 FAM216BQ8N7L0 139 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 LINC00587B1AMM8 73 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 SUMO2P61956 95 aaKnown RBP7.16□□□□□ -1.26
PTPN3-204ENST00000446349 TEX38Q6PEX7 206 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 REC114Q7Z4M0 266 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 TBX15Q96SF7 602 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 WNT10AQ9GZT5 417 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 A0A1W2PP11 408 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 MSGN1A6NI15 193 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 LEPROTL1O95214 131 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 REG1AP05451 166 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 SMIM6P0DI80 62 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 FOLR2P14207 255 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 PRSS53Q2L4Q9 553 aa7.16□□□□□ -1.26
PTPN3-204ENST00000446349 HEPN1Q6WQI6 88 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms