RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 USMG5Q96IX5 58 aa9.84□□□□□ -0.83
PDLIM2-212ENST00000443561 HINT2Q9BX68 163 aa9.84□□□□□ -0.83
PDLIM2-212ENST00000443561 CACNG5Q9UF02 275 aa9.84□□□□□ -0.83
PDLIM2-212ENST00000443561 FBXL7Q9UJT9 491 aa9.84□□□□□ -0.83
PDLIM2-212ENST00000443561 F11RQ9Y624 299 aaKnown RBP9.84□□□□□ -0.83
PDLIM2-212ENST00000443561 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 INS-IGF2F8WCM5 200 aa9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 SFT2D2O95562 160 aa9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 ANXA7P20073 488 aaKnown RBP9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 RAB25P57735 213 aa9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 EGFEM1PQ0D2K5 195 aa9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 PDLIM3Q53GG5 364 aaPredicted RBP9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 TMEM128Q5BJH2 165 aa9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 THOC7Q6I9Y2 204 aaKnown RBP9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 CENPSQ8N2Z9 138 aa9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 LRTM2Q8N967 370 aa9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 ZNF114Q8NC26 417 aa9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 TMEM170AQ8WVE7 144 aa9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 RCC1LQ96I51 464 aaKnown RBP9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 SCGB3A2Q96PL1 93 aa9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 C7orf50Q9BRJ6 194 aaKnown RBP9.83□□□□□ -0.84
PDLIM2-212ENST00000443561 IGHV3-21A0A0B4J1V1 117 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 A0A0B4J2A0 478 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 A0A0G2JLM5 398 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 C13orf42A0A1B0GVH6 325 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 PPP5D1E7EU14 171 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 UPK1BO75841 260 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 NXPH3O95157 252 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 HLA-AP01891 365 aaKnown RBP9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 OR8U8P0C7N1 319 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 RNASE2P10153 161 aaKnown RBP9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 DEFA6Q01524 100 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 KLF5Q13887 457 aaPredicted RBP9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 BSXQ3C1V8 233 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 ADAMTSL5Q6ZMM2 481 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 FAM219AQ8IW50 185 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 OR52B4Q8NGK2 314 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 OR4A16Q8NH70 328 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 ZNF502Q8TBZ5 544 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 S100ZQ8WXG8 99 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 FKBP11Q9NYL4 201 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 PEF1Q9UBV8 284 aaKnown RBP9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 SHPKQ9UHJ6 478 aa9.82□□□□□ -0.84
PDLIM2-212ENST00000443561 C9orf170A2RU37 121 aa9.81□□□□□ -0.84
PDLIM2-212ENST00000443561 MPTX1A8MV57 137 aa9.81□□□□□ -0.84
PDLIM2-212ENST00000443561 PITX3O75364 302 aa9.81□□□□□ -0.84
PDLIM2-212ENST00000443561 ATP5G2Q06055 141 aa9.81□□□□□ -0.84
PDLIM2-212ENST00000443561 ASAH1Q13510 395 aa9.81□□□□□ -0.84
PDLIM2-212ENST00000443561 HAPLN4Q86UW8 402 aa9.81□□□□□ -0.84
PDLIM2-212ENST00000443561 C20orf85Q9H1P6 137 aa9.81□□□□□ -0.84
PDLIM2-212ENST00000443561 AURKAIP1Q9NWT8 199 aaPredicted RBP9.81□□□□□ -0.84
PDLIM2-212ENST00000443561 MRPL36Q9P0J6 103 aaKnown RBP9.81□□□□□ -0.84
PDLIM2-212ENST00000443561 I3L2K1 104 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 OVOL1O14753 267 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 ADAP1O75689 374 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 TCRBP04435 133 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 OR4E1P0C645 316 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 VAMP1P23763 118 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 INPP1P49441 399 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 UBE2MP61081 183 aaKnown RBP9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 DHRS2Q13268 280 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 ZNF846Q147U1 533 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 ACSM6Q6P461 480 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 CLEC19AQ6UXS0 136 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 HSD17B13Q7Z5P4 300 aaPredicted RBP9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 LGI3Q8N145 548 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 OR1P1Q8NH06 330 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 RRNAD1Q96FB5 475 aaKnown RBP9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 WDR12Q9GZL7 423 aaKnown RBP9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 FNDC4Q9H6D8 234 aaPredicted RBP9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 PLEKHA3Q9HB20 300 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 RANGRFQ9HD47 186 aaPredicted RBP9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 KCNIP3Q9Y2W7 256 aa9.8□□□□□ -0.84
PDLIM2-212ENST00000443561 SEC14L6B5MCN3 397 aa9.79□□□□□ -0.84
PDLIM2-212ENST00000443561 HIST1H1BP16401 226 aaKnown RBP9.79□□□□□ -0.84
PDLIM2-212ENST00000443561 ADMP35318 185 aa9.79□□□□□ -0.84
PDLIM2-212ENST00000443561 MECP2P51608 486 aaKnown RBP9.79□□□□□ -0.84
PDLIM2-212ENST00000443561 SYNJ2BPP57105 145 aa9.79□□□□□ -0.84
PDLIM2-212ENST00000443561 LYG2Q86SG7 212 aa9.79□□□□□ -0.84
PDLIM2-212ENST00000443561 OR52E5Q8NH55 327 aa9.79□□□□□ -0.84
PDLIM2-212ENST00000443561 SCARB1Q8WTV0 552 aa9.79□□□□□ -0.84
PDLIM2-212ENST00000443561 DPF1Q92782 380 aa9.79□□□□□ -0.84
PDLIM2-212ENST00000443561 ZC4H2Q9NQZ6 224 aa9.79□□□□□ -0.84
PDLIM2-212ENST00000443561 HSPB7Q9UBY9 170 aa9.79□□□□□ -0.84
PDLIM2-212ENST00000443561 WI2-2373I1.2A0A1W2PRP0 233 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 K7EIL1 84 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 ATG12O94817 140 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 OR2C1O95371 312 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 IGHV3-48P01763 117 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 SULT1A3P0DMM9 295 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 SULT1A4P0DMN0 295 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 DEFA4P12838 97 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 SPCS3P61009 180 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 SMCO1Q147U7 214 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 GGNBP1Q5YKI7 109 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 SLC25A24Q6NUK1 477 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 RNASE11Q8TAA1 199 aaKnown RBP9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 SEC22CQ9BRL7 303 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 CHRDL1Q9BU40 450 aa9.78□□□□□ -0.84
PDLIM2-212ENST00000443561 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms